MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085816 Location: 368648..380003 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Slowpoke Replicon: chromosome
Accession: NZ_CP085816 Location: 368648..380003 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Slowpoke Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF68_RS01800 (364094) | 364094..365192 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF68_RS01805 (365202) | 365202..366719 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF68_RS01810 (366795) | 366795..367340 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF68_RS01815 (367605) | 367605..368363 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF68_RS01825 (368648) | 368648..369454 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF68_RS01830 (369734) | 369734..369985 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF68_RS01835 (370194) | 370194..370421 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF68_RS01840 (370421) | 370421..370819 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF68_RS01845 (371627) | 371627..372163 | + | 537 | WP_001038502.1 | STM3031 family outer membrane protein | - |
| LJF68_RS01850 (372210) | 372210..372842 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF68_RS01855 (373561) | 373561..374142 | + | 582 | WP_001244651.1 | fimbrial protein | - |
| LJF68_RS01860 (374262) | 374262..376745 | + | 2484 | WP_000705505.1 | fimbrial outer membrane usher protein StdB | - |
| LJF68_RS01865 (376786) | 376786..377529 | + | 744 | WP_000798504.1 | fimbrial biogenesis chaperone StdC | - |
| LJF68_RS01870 (377526) | 377526..378602 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF68_RS01875 (378746) | 378746..379258 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF68_RS01880 (379245) | 379245..380003 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF68_RS01885 (380213) | 380213..381061 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF68_RS01890 (381183) | 381183..381455 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF68_RS01895 (381486) | 381486..382715 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF68_RS01900 (382857) | 382857..383312 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF68_RS01905 (383416) | 383416..384279 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |