MGE detailed information
MGE type: Prophage MGE length: 52052 bp
Accession: NZ_CP085816 Location: 2215142..2267193 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Slowpoke Replicon: chromosome
Accession: NZ_CP085816 Location: 2215142..2267193 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Slowpoke Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF68_RS10985 () | 2210578..2211951 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| LJF68_RS10990 () | 2211999..2212880 | - | 882 | WP_000984498.1 | protease HtpX | - |
| LJF68_RS10995 () | 2213074..2215122 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LJF68_RS11000 () | 2215142..2215828 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF68_RS11005 () | 2215926..2216423 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF68_RS11010 () | 2216552..2217835 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LJF68_RS11015 () | 2217804..2220437 | + | 2634 | WP_001529852.1 | PqiB family protein | - |
| LJF68_RS11020 () | 2220515..2221954 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF68_RS11025 () | 2222072..2222308 | + | 237 | WP_024131108.1 | YebV family protein | - |
| LJF68_RS11030 () | 2222419..2222610 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF68_RS11035 () | 2222629..2223279 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF68_RS11040 () | 2223503..2223667 | - | 165 | WP_001134856.1 | membrane protein | - |
| LJF68_RS11045 () | 2223952..2224674 | - | 723 | WP_000182071.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE2 | - |
| LJF68_RS11050 () | 2225358..2225753 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF68_RS11055 () | 2226083..2226559 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF68_RS11060 () | 2226932..2227351 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF68_RS11065 () | 2227724..2227993 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF68_RS11070 () | 2228159..2228299 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF68_RS11075 () | 2228445..2229652 | - | 1208 | Protein_2161 | IS256 family transposase | - |
| LJF68_RS11080 () | 2229722..2230188 | + | 467 | Protein_2162 | tyrosine-type recombinase/integrase | - |
| LJF68_RS11085 () | 2231438..2232352 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF68_RS11090 () | 2232485..2232643 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF68_RS11095 () | 2232653..2233267 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF68_RS11100 () | 2233594..2233826 | - | 233 | Protein_2166 | helix-turn-helix domain-containing protein | - |
| LJF68_RS11105 () | 2234435..2234536 | - | 102 | Protein_2167 | arsenic transporter | - |
| LJF68_RS11110 () | 2234527..2234707 | + | 181 | Protein_2168 | IS3 family transposase | - |
| LJF68_RS11115 () | 2235097..2235297 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF68_RS11120 () | 2235394..2235905 | - | 512 | Protein_2170 | tail fiber assembly protein | - |
| LJF68_RS23020 () | 2235918..2236205 | - | 288 | Protein_2171 | macro domain-containing protein | - |
| LJF68_RS11125 () | 2236215..2237446 | - | 1232 | Protein_2172 | tail fiber protein | - |
| LJF68_RS11130 () | 2237445..2238012 | - | 568 | Protein_2173 | phage terminase large subunit family protein | - |
| LJF68_RS11135 () | 2237999..2238490 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF68_RS11140 () | 2238545..2238733 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF68_RS11145 () | 2238798..2238965 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF68_RS11150 () | 2239222..2239755 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF68_RS11155 () | 2239809..2240000 | - | 192 | Protein_2178 | glycoside hydrolase family 19 protein | - |
| LJF68_RS11160 () | 2239989..2240450 | + | 462 | Protein_2179 | DNA breaking-rejoining protein | - |
| LJF68_RS11165 () | 2240714..2241636 | + | 923 | Protein_2180 | tyrosine-type recombinase/integrase | - |
| LJF68_RS11170 () | 2242581..2243381 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF68_RS11175 () | 2243410..2243651 | - | 242 | Protein_2182 | recombinase family protein | - |
| LJF68_RS11180 () | 2243861..2244583 | + | 723 | WP_000161704.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE | - |
| LJF68_RS11185 () | 2244785..2245129 | - | 345 | Protein_2184 | tail fiber assembly protein | - |
| LJF68_RS11190 () | 2245134..2245997 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| LJF68_RS11195 () | 2246037..2248368 | - | 2332 | Protein_2186 | host specificity protein J | - |
| LJF68_RS11200 () | 2248368..2248628 | - | 261 | Protein_2187 | C40 family peptidase | - |
| LJF68_RS11205 () | 2248638..2249333 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF68_RS11210 () | 2249423..2249956 | + | 534 | WP_000877926.1 | superoxide dismutase [Cu-Zn] SodC1 | - |
| LJF68_RS11215 () | 2250073..2250300 | - | 228 | Protein_2190 | outer membrane beta-barrel protein | - |
| LJF68_RS11220 () | 2250332..2250643 | - | 312 | Protein_2191 | DUF1441 family protein | - |
| LJF68_RS23025 () | 2250851..2251330 | - | 480 | WP_001541990.1 | lysis protein | - |
| LJF68_RS11235 () | 2251348..2251800 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LJF68_RS11240 () | 2251784..2252113 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF68_RS11245 () | 2252389..2253075 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF68_RS11250 () | 2253436..2253885 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF68_RS11255 () | 2254259..2254786 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF68_RS11260 () | 2254880..2255569 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF68_RS11265 () | 2255566..2255702 | - | 137 | Protein_2199 | YlcG family protein | - |
| LJF68_RS23095 () | 2255699..2255920 | - | 222 | WP_254888507.1 | recombination protein NinG | - |
| LJF68_RS11275 () | 2255923..2256522 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF68_RS11280 () | 2256586..2256804 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF68_RS11285 () | 2257106..2257204 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF68_RS11290 () | 2257523..2259502 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF68_RS11295 () | 2259916..2260194 | + | 279 | WP_001575998.1 | excisionase | - |
| LJF68_RS11300 () | 2260169..2261248 | + | 1080 | WP_000087636.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| - | 2261386..2261531 | + | 146 | - | - | Antitoxin Detail |
| - | 2261388..2261491 | - | 104 | - | - | Toxin Detail |
| LJF68_RS11305 () | 2261631..2261984 | - | 354 | WP_000722370.1 | YebY family protein | - |
| LJF68_RS11310 () | 2262001..2262876 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF68_RS11315 () | 2262877..2263251 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF68_RS11320 () | 2263389..2263619 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF68_RS11325 () | 2263727..2264383 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF68_RS11330 () | 2264407..2265105 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF68_RS11335 () | 2265142..2267193 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF68_RS11340 () | 2267406..2268065 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LJF68_RS11345 () | 2268159..2268512 | - | 354 | WP_001042123.1 | protein YebF | - |
| LJF68_RS11350 () | 2268580..2268870 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF68_RS11355 () | 2269001..2270179 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF68_RS11360 () | 2270279..2270920 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|