MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085815 Location: 4348800..4360155 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Slowbro Replicon: chromosome
Accession: NZ_CP085815 Location: 4348800..4360155 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Slowbro Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF37_RS21180 (4344246) | 4344246..4345344 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF37_RS21185 (4345354) | 4345354..4346871 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF37_RS21190 (4346947) | 4346947..4347492 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF37_RS21195 (4347757) | 4347757..4348515 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF37_RS21205 (4348800) | 4348800..4349606 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF37_RS21210 (4349886) | 4349886..4350137 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF37_RS21215 (4350346) | 4350346..4350573 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF37_RS21220 (4350573) | 4350573..4350971 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF37_RS21225 (4351779) | 4351779..4352315 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF37_RS21230 (4352362) | 4352362..4352994 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF37_RS21235 (4353713) | 4353713..4354294 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF37_RS21240 (4354414) | 4354414..4356897 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF37_RS21245 (4356938) | 4356938..4357681 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF37_RS21250 (4357678) | 4357678..4358754 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF37_RS21255 (4358898) | 4358898..4359410 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF37_RS21260 (4359397) | 4359397..4360155 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF37_RS21265 (4360365) | 4360365..4361213 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF37_RS21270 (4361335) | 4361335..4361607 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF37_RS21275 (4361638) | 4361638..4362867 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF37_RS21280 (4363009) | 4363009..4363464 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF37_RS21285 (4363568) | 4363568..4364431 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |