MGE detailed information
MGE type: Prophage MGE length: 59707 bp
Accession: NZ_CP085814 Location: 2451631..2511337 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Plusle Replicon: chromosome
Accession: NZ_CP085814 Location: 2451631..2511337 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Plusle Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF38_RS11665 () | 2447904..2448545 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LJF38_RS11670 () | 2448645..2449823 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF38_RS11675 () | 2449954..2450244 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF38_RS11680 () | 2450312..2450665 | + | 354 | WP_001042123.1 | protein YebF | - |
| LJF38_RS11685 () | 2450759..2451418 | + | 660 | WP_227798604.1 | tellurite resistance TerB family protein | - |
| LJF38_RS11690 () | 2451631..2453682 | + | 2052 | WP_227798605.1 | oligopeptidase B | - |
| LJF38_RS11695 () | 2453719..2454417 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF38_RS11700 () | 2454441..2455097 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF38_RS11705 () | 2455205..2455435 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF38_RS11710 () | 2455573..2455947 | + | 375 | WP_134938112.1 | CopC domain-containing protein YobA | - |
| LJF38_RS11715 () | 2455948..2456823 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF38_RS11720 () | 2456840..2457193 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 2457293..2457438 | - | 146 | - | - | Antitoxin Detail |
| - | 2457333..2457436 | + | 104 | - | - | Toxin Detail |
| LJF38_RS11725 () | 2457576..2458655 | - | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| LJF38_RS11730 () | 2458630..2458908 | - | 279 | WP_001575998.1 | excisionase | - |
| LJF38_RS11735 () | 2459322..2461301 | + | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF38_RS11740 () | 2461620..2461718 | + | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF38_RS11745 () | 2462020..2462238 | + | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF38_RS11750 () | 2462302..2462901 | + | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF38_RS23085 () | 2462904..2463125 | + | 222 | WP_254888507.1 | recombination protein NinG | - |
| LJF38_RS11760 () | 2463122..2463258 | + | 137 | Protein_2281 | YlcG family protein | - |
| LJF38_RS11765 () | 2463255..2463944 | + | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF38_RS11770 () | 2464038..2464565 | + | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF38_RS11775 () | 2464939..2465388 | - | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF38_RS11780 () | 2465749..2466435 | - | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF38_RS11785 () | 2466711..2467040 | + | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF38_RS11790 () | 2467024..2467476 | + | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LJF38_RS23025 () | 2467494..2467973 | + | 480 | WP_001541990.1 | lysis protein | - |
| LJF38_RS11805 () | 2468181..2468492 | + | 312 | Protein_2289 | DUF1441 family protein | - |
| LJF38_RS11810 () | 2468524..2468751 | + | 228 | Protein_2290 | outer membrane beta-barrel protein | - |
| LJF38_RS11815 () | 2468868..2469401 | - | 534 | WP_227798606.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| LJF38_RS11820 () | 2469491..2470186 | + | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF38_RS11825 () | 2470196..2470456 | + | 261 | Protein_2293 | C40 family peptidase | - |
| LJF38_RS11830 () | 2470456..2472787 | + | 2332 | Protein_2294 | host specificity protein J | - |
| LJF38_RS11835 () | 2472857..2473690 | + | 834 | WP_077943317.1 | DUF1983 domain-containing protein | - |
| LJF38_RS11840 () | 2473695..2474039 | + | 345 | Protein_2296 | tail fiber assembly protein | - |
| LJF38_RS11845 () | 2474241..2474963 | - | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| LJF38_RS11850 () | 2475173..2475414 | + | 242 | Protein_2298 | recombinase family protein | - |
| LJF38_RS11855 () | 2475443..2476243 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF38_RS11860 () | 2477188..2478110 | - | 923 | Protein_2300 | hypothetical protein ; Integrase | Integrase |
| LJF38_RS11865 () | 2478374..2478835 | - | 462 | Protein_2301 | DNA breaking-rejoining protein | - |
| LJF38_RS11870 () | 2478824..2479015 | + | 192 | Protein_2302 | glycoside hydrolase family 19 protein | - |
| LJF38_RS11875 () | 2479069..2479602 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF38_RS11880 () | 2479859..2480026 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF38_RS11885 () | 2480091..2480279 | - | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF38_RS11890 () | 2480334..2480825 | + | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF38_RS11895 () | 2480812..2481379 | + | 568 | Protein_2307 | phage terminase large subunit family protein | - |
| LJF38_RS11900 () | 2481378..2482609 | + | 1232 | Protein_2308 | tail fiber protein | - |
| LJF38_RS23030 () | 2482619..2482906 | + | 288 | Protein_2309 | macro domain-containing protein | - |
| LJF38_RS11905 () | 2482919..2483430 | + | 512 | Protein_2310 | tail fiber assembly protein | - |
| LJF38_RS11910 () | 2483527..2483727 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF38_RS11915 () | 2484117..2484297 | - | 181 | Protein_2312 | IS3 family transposase | - |
| LJF38_RS11920 () | 2484288..2484389 | + | 102 | Protein_2313 | arsenic transporter | - |
| LJF38_RS11925 () | 2484998..2485230 | + | 233 | Protein_2314 | helix-turn-helix domain-containing protein | - |
| LJF38_RS11930 () | 2485557..2486171 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF38_RS11935 () | 2486181..2486339 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF38_RS11940 () | 2486472..2487386 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF38_RS11945 () | 2488636..2489102 | - | 467 | Protein_2318 | tyrosine-type recombinase/integrase | - |
| LJF38_RS11950 () | 2489172..2490379 | + | 1208 | Protein_2319 | IS256 family transposase ISEc39 | Transposase |
| LJF38_RS11955 () | 2490525..2490665 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF38_RS11960 () | 2490831..2491100 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF38_RS11965 () | 2491473..2491892 | + | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF38_RS11970 () | 2492265..2492741 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF38_RS11975 () | 2493071..2493466 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF38_RS11980 () | 2494150..2494872 | + | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LJF38_RS11985 () | 2495157..2495321 | + | 165 | WP_001134856.1 | membrane protein | - |
| LJF38_RS11990 () | 2495545..2496195 | + | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF38_RS11995 () | 2496214..2496405 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF38_RS12000 () | 2496516..2496752 | - | 237 | WP_024131108.1 | YebV family protein | - |
| LJF38_RS12005 () | 2496870..2498309 | - | 1440 | WP_227798607.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF38_RS12010 () | 2498387..2501020 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| LJF38_RS12015 () | 2500989..2502272 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LJF38_RS12020 () | 2502401..2502898 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF38_RS12025 () | 2502996..2503682 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF38_RS12030 () | 2503702..2505750 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LJF38_RS12035 () | 2505944..2506825 | + | 882 | WP_000984498.1 | protease HtpX | - |
| LJF38_RS12040 () | 2506873..2508246 | - | 1374 | WP_227798608.1 | MFS transporter | - |
| LJF38_RS12045 () | 2508422..2509213 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LJF38_RS12050 () | 2509425..2509664 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| LJF38_RS12055 () | 2509822..2509965 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LJF38_RS12060 () | 2510036..2510323 | + | 288 | WP_001000660.1 | YebO family protein | - |
| LJF38_RS12065 () | 2510972..2511115 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LJF38_RS12070 () | 2511128..2511337 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LJF38_RS12075 () | 2511557..2513302 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LJF38_RS12080 () | 2513368..2514177 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LJF38_RS12085 () | 2514174..2514740 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LJF38_RS12090 () | 2515150..2515608 | - | 459 | WP_000156284.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|