MGE detailed information
MGE type: Prophage MGE length: 52052 bp
Accession: NZ_CP085813 Location: 2215030..2267081 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Minun Replicon: chromosome
Accession: NZ_CP085813 Location: 2215030..2267081 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Minun Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF39_RS10975 () | 2210466..2211839 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| LJF39_RS10980 () | 2211887..2212768 | - | 882 | WP_000984498.1 | protease HtpX | - |
| LJF39_RS10985 () | 2212962..2215010 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LJF39_RS10990 () | 2215030..2215716 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF39_RS10995 () | 2215814..2216311 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF39_RS11000 () | 2216440..2217723 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LJF39_RS11005 () | 2217692..2220325 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| LJF39_RS11010 () | 2220403..2221842 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF39_RS11015 () | 2221960..2222196 | + | 237 | WP_024131108.1 | YebV family protein | - |
| LJF39_RS11020 () | 2222307..2222498 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF39_RS11025 () | 2222517..2223167 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF39_RS11030 () | 2223391..2223555 | - | 165 | WP_001134856.1 | membrane protein | - |
| LJF39_RS11035 () | 2223840..2224562 | - | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LJF39_RS11040 () | 2225246..2225641 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF39_RS11045 () | 2225971..2226447 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF39_RS11050 () | 2226820..2227239 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF39_RS11055 () | 2227612..2227881 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF39_RS11060 () | 2228047..2228187 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF39_RS11065 () | 2228333..2229540 | - | 1208 | Protein_2159 | IS256 family transposase ISEc39 | Transposase |
| LJF39_RS11070 () | 2229610..2230076 | + | 467 | Protein_2160 | tyrosine-type recombinase/integrase | - |
| LJF39_RS11075 () | 2231326..2232240 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF39_RS11080 () | 2232373..2232531 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF39_RS11085 () | 2232541..2233155 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF39_RS11090 () | 2233482..2233714 | - | 233 | Protein_2164 | helix-turn-helix domain-containing protein | - |
| LJF39_RS11095 () | 2234323..2234424 | - | 102 | Protein_2165 | arsenic transporter | - |
| LJF39_RS11100 () | 2234415..2234595 | + | 181 | Protein_2166 | IS3 family transposase | - |
| LJF39_RS11105 () | 2234985..2235185 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF39_RS11110 () | 2235282..2235793 | - | 512 | Protein_2168 | tail fiber assembly protein | - |
| LJF39_RS23025 () | 2235806..2236093 | - | 288 | Protein_2169 | macro domain-containing protein | - |
| LJF39_RS11115 () | 2236103..2237334 | - | 1232 | Protein_2170 | tail fiber protein | - |
| LJF39_RS11120 () | 2237333..2237900 | - | 568 | Protein_2171 | phage terminase large subunit family protein | - |
| LJF39_RS11125 () | 2237887..2238378 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF39_RS11130 () | 2238433..2238621 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF39_RS11135 () | 2238686..2238853 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF39_RS11140 () | 2239110..2239643 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF39_RS11145 () | 2239697..2239888 | - | 192 | Protein_2176 | glycoside hydrolase family 19 protein | - |
| LJF39_RS11150 () | 2239877..2240338 | + | 462 | Protein_2177 | DNA breaking-rejoining protein | - |
| LJF39_RS11155 () | 2240602..2241524 | + | 923 | Protein_2178 | hypothetical protein ; Integrase | Integrase |
| LJF39_RS11160 () | 2242469..2243269 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF39_RS11165 () | 2243298..2243539 | - | 242 | Protein_2180 | recombinase family protein | - |
| LJF39_RS11170 () | 2243749..2244471 | + | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| LJF39_RS11175 () | 2244673..2245017 | - | 345 | Protein_2182 | tail fiber assembly protein | - |
| LJF39_RS11180 () | 2245022..2245885 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| LJF39_RS11185 () | 2245925..2248256 | - | 2332 | Protein_2184 | host specificity protein J | - |
| LJF39_RS11190 () | 2248256..2248516 | - | 261 | Protein_2185 | C40 family peptidase | - |
| LJF39_RS11195 () | 2248526..2249221 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF39_RS11200 () | 2249311..2249844 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| LJF39_RS11205 () | 2249961..2250188 | - | 228 | Protein_2188 | outer membrane beta-barrel protein | - |
| LJF39_RS11210 () | 2250220..2250531 | - | 312 | Protein_2189 | DUF1441 family protein | - |
| LJF39_RS23030 () | 2250739..2251218 | - | 480 | WP_001541990.1 | lysis protein | - |
| LJF39_RS11225 () | 2251236..2251688 | - | 453 | WP_227791047.1 | lysozyme | - |
| LJF39_RS11230 () | 2251672..2252001 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF39_RS11235 () | 2252277..2252963 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF39_RS11240 () | 2253324..2253773 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF39_RS11245 () | 2254147..2254674 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF39_RS11250 () | 2254768..2255457 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF39_RS11255 () | 2255454..2255590 | - | 137 | Protein_2197 | YlcG family protein | - |
| LJF39_RS23080 () | 2255587..2255808 | - | 222 | WP_254888507.1 | recombination protein NinG | - |
| LJF39_RS11265 () | 2255811..2256410 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF39_RS11270 () | 2256474..2256692 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF39_RS11275 () | 2256994..2257092 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF39_RS11280 () | 2257411..2259390 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF39_RS11285 () | 2259804..2260082 | + | 279 | WP_001575998.1 | excisionase | - |
| LJF39_RS11290 () | 2260057..2261136 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2261274..2261419 | + | 146 | - | - | Antitoxin Detail |
| - | 2261276..2261379 | - | 104 | - | - | Toxin Detail |
| LJF39_RS11295 () | 2261519..2261872 | - | 354 | WP_000722370.1 | YebY family protein | - |
| LJF39_RS11300 () | 2261889..2262764 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF39_RS11305 () | 2262765..2263139 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF39_RS11310 () | 2263277..2263507 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF39_RS11315 () | 2263615..2264271 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF39_RS11320 () | 2264295..2264993 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF39_RS11325 () | 2265030..2267081 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF39_RS11330 () | 2267294..2267953 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LJF39_RS11335 () | 2268047..2268400 | - | 354 | WP_001042123.1 | protein YebF | - |
| LJF39_RS11340 () | 2268468..2268758 | - | 291 | Protein_2214 | DNA damage-inducible protein YebG | - |
| LJF39_RS11345 () | 2268889..2270067 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF39_RS11350 () | 2270167..2270808 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|