MGE detailed information
MGE type: Prophage MGE length: 25935 bp
Accession: NZ_CP085812 Location: 4322815..4348749 Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund strain Articuno Replicon: chromosome
Accession: NZ_CP085812 Location: 4322815..4348749 Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund strain Articuno Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF40_RS21045 (LJF40_21045) | 4318328..4318825 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF40_RS21050 (LJF40_21050) | 4318954..4320237 | + | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| LJF40_RS21055 (LJF40_21055) | 4320206..4322839 | + | 2634 | WP_001530909.1 | PqiB family protein | - |
| LJF40_RS21060 (LJF40_21060) | 4322917..4324356 | + | 1440 | WP_001530936.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF40_RS21065 (LJF40_21065) | 4324473..4324709 | + | 237 | WP_024131167.1 | YebV family protein | - |
| LJF40_RS21070 (LJF40_21070) | 4324820..4325011 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF40_RS21075 (LJF40_21075) | 4325030..4325680 | - | 651 | WP_000986166.1 | protein-serine/threonine phosphatase | - |
| LJF40_RS21080 (LJF40_21080) | 4325905..4326069 | - | 165 | WP_001134850.1 | hypothetical protein | - |
| LJF40_RS21085 (LJF40_21085) | 4326354..4327076 | - | 723 | WP_000182069.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE2 | - |
| LJF40_RS21090 (LJF40_21090) | 4327760..4328155 | + | 396 | WP_000422883.1 | DUF1398 domain-containing protein | - |
| LJF40_RS21095 (LJF40_21095) | 4328483..4328959 | + | 477 | WP_000102094.1 | hypothetical protein | - |
| LJF40_RS21100 (LJF40_21100) | 4329347..4329766 | - | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| LJF40_RS21105 (LJF40_21105) | 4329895..4330095 | - | 201 | WP_000007801.1 | hypothetical protein | - |
| LJF40_RS21110 (LJF40_21110) | 4330135..4330404 | + | 270 | WP_077906414.1 | hypothetical protein | - |
| LJF40_RS21115 (LJF40_21115) | 4330570..4330710 | + | 141 | WP_001604859.1 | hypothetical protein | - |
| LJF40_RS21120 (LJF40_21120) | 4330856..4331208 | - | 353 | Protein_4109 | transposase | - |
| LJF40_RS21125 (LJF40_21125) | 4331360..4331923 | + | 564 | Protein_4110 | fimbrial protein | - |
| LJF40_RS21130 (LJF40_21130) | 4332714..4333629 | + | 916 | Protein_4111 | DMT family transporter | - |
| LJF40_RS21135 (LJF40_21135) | 4333762..4333920 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF40_RS21140 (LJF40_21140) | 4333930..4334544 | + | 615 | WP_000848064.1 | disulfide bond formation protein B | - |
| LJF40_RS21145 (LJF40_21145) | 4334871..4335103 | - | 233 | Protein_4114 | helix-turn-helix domain-containing protein | - |
| LJF40_RS21150 (LJF40_21150) | 4335692..4335817 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| LJF40_RS21155 (LJF40_21155) | 4335817..4335997 | + | 181 | Protein_4116 | IS3 family transposase | - |
| LJF40_RS21160 (LJF40_21160) | 4336387..4336587 | + | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| LJF40_RS23390 | 4336684..4337031 | - | 348 | Protein_4118 | tail assembly chaperone | - |
| LJF40_RS21165 (LJF40_21165) | 4337032..4338087 | - | 1056 | Protein_4119 | tail fiber protein | - |
| LJF40_RS21170 (LJF40_21170) | 4338011..4338578 | - | 568 | Protein_4120 | phage terminase large subunit family protein | - |
| LJF40_RS21175 (LJF40_21175) | 4338565..4339056 | - | 492 | WP_000348547.1 | DUF1441 family protein | - |
| LJF40_RS21180 (LJF40_21180) | 4339359..4339526 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF40_RS21185 (LJF40_21185) | 4339783..4340315 | - | 533 | Protein_4123 | DUF2514 domain-containing protein | - |
| LJF40_RS21190 (LJF40_21190) | 4340312..4340560 | - | 249 | Protein_4124 | glycoside hydrolase family 19 protein | - |
| LJF40_RS21195 (LJF40_21195) | 4340552..4341700 | + | 1149 | Protein_4125 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LJF40_RS21200 (LJF40_21200) | 4341733..4342812 | + | 1080 | WP_000087641.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| - | 4342941..4343084 | + | 144 | - | - | Antitoxin Detail |
| - | 4342943..4343046 | - | 104 | - | - | Toxin Detail |
| LJF40_RS21205 (LJF40_21205) | 4343187..4343540 | - | 354 | WP_000722363.1 | YebY family protein | - |
| LJF40_RS21210 (LJF40_21210) | 4343557..4344432 | - | 876 | WP_000979695.1 | copper homeostasis membrane protein CopD | - |
| LJF40_RS21215 (LJF40_21215) | 4344433..4344807 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF40_RS21220 (LJF40_21220) | 4344945..4345175 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF40_RS21225 (LJF40_21225) | 4345283..4345939 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF40_RS21230 (LJF40_21230) | 4345963..4346661 | + | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| LJF40_RS21235 (LJF40_21235) | 4346698..4348749 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF40_RS21240 (LJF40_21240) | 4348962..4349621 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| LJF40_RS21245 (LJF40_21245) | 4349715..4350068 | - | 354 | WP_001042123.1 | protein YebF | - |
| LJF40_RS21250 (LJF40_21250) | 4350136..4350426 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF40_RS21255 (LJF40_21255) | 4350557..4351735 | + | 1179 | WP_000173436.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF40_RS21260 (LJF40_21260) | 4351835..4352476 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|