MGE detailed information
MGE type: Prophage MGE length: 38860 bp
Accession: NZ_CP085811 Location: 2685231..2724090 Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund strain Zapdos Replicon: chromosome
Accession: NZ_CP085811 Location: 2685231..2724090 Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund strain Zapdos Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF41_RS13360 (LJF41_13360) | 2680960..2681418 | + | 459 | WP_000156280.1 | DUF986 family protein | - |
| LJF41_RS13365 (LJF41_13365) | 2681828..2682394 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LJF41_RS13370 (LJF41_13370) | 2682391..2683200 | - | 810 | WP_000010916.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LJF41_RS13375 (LJF41_13375) | 2683266..2685011 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LJF41_RS13380 (LJF41_13380) | 2685231..2685440 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LJF41_RS13385 (LJF41_13385) | 2685453..2685596 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LJF41_RS13390 (LJF41_13390) | 2686245..2686532 | - | 288 | WP_001000660.1 | YebO family protein | - |
| LJF41_RS13395 (LJF41_13395) | 2686603..2686746 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LJF41_RS13400 (LJF41_13400) | 2686904..2687143 | + | 240 | WP_001236778.1 | invasion protein YobH | - |
| LJF41_RS13405 (LJF41_13405) | 2687355..2688146 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LJF41_RS13410 (LJF41_13410) | 2688322..2689695 | + | 1374 | WP_000416144.1 | MFS transporter | - |
| LJF41_RS13415 (LJF41_13415) | 2689743..2690624 | - | 882 | WP_000984498.1 | protease HtpX | - |
| LJF41_RS13420 (LJF41_13420) | 2690817..2692865 | - | 2049 | WP_001091241.1 | carboxy terminal-processing peptidase | - |
| LJF41_RS13425 (LJF41_13425) | 2692885..2693571 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF41_RS13430 (LJF41_13430) | 2693669..2694166 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF41_RS13435 (LJF41_13435) | 2694295..2695578 | + | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| LJF41_RS13440 (LJF41_13440) | 2695547..2698180 | + | 2634 | WP_001530909.1 | hypothetical protein | VF |
| LJF41_RS13445 (LJF41_13445) | 2698258..2699697 | + | 1440 | WP_001530936.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF41_RS13450 (LJF41_13450) | 2699814..2700050 | + | 237 | WP_024131167.1 | YebV family protein | - |
| LJF41_RS13455 (LJF41_13455) | 2700161..2700352 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF41_RS13460 (LJF41_13460) | 2700371..2701021 | - | 651 | WP_000986166.1 | protein-serine/threonine phosphatase | - |
| LJF41_RS13465 (LJF41_13465) | 2701246..2701410 | - | 165 | WP_001134850.1 | hypothetical protein | - |
| LJF41_RS13470 (LJF41_13470) | 2701695..2702417 | - | 723 | WP_000182069.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LJF41_RS13475 (LJF41_13475) | 2703101..2703496 | + | 396 | WP_000422883.1 | DUF1398 domain-containing protein | - |
| LJF41_RS13480 (LJF41_13480) | 2703824..2704300 | + | 477 | WP_000102094.1 | hypothetical protein | - |
| LJF41_RS13485 (LJF41_13485) | 2704688..2705107 | - | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| LJF41_RS13490 (LJF41_13490) | 2705236..2705436 | - | 201 | WP_000007801.1 | hypothetical protein | - |
| LJF41_RS13495 (LJF41_13495) | 2705476..2705745 | + | 270 | WP_077906414.1 | hypothetical protein | - |
| LJF41_RS13500 (LJF41_13500) | 2705911..2706051 | + | 141 | WP_001604859.1 | hypothetical protein | - |
| LJF41_RS13505 (LJF41_13505) | 2706197..2706549 | - | 353 | Protein_2622 | IS256 family transposase ISEc39 | Transposase |
| LJF41_RS13510 (LJF41_13510) | 2706701..2707264 | + | 564 | Protein_2623 | fimbrial protein | - |
| LJF41_RS13515 (LJF41_13515) | 2708055..2708970 | + | 916 | Protein_2624 | DMT family transporter | - |
| LJF41_RS13520 (LJF41_13520) | 2709103..2709261 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF41_RS13525 (LJF41_13525) | 2709271..2709885 | + | 615 | WP_000848064.1 | disulfide bond formation protein B | - |
| LJF41_RS13530 (LJF41_13530) | 2710212..2710444 | - | 233 | Protein_2627 | helix-turn-helix domain-containing protein | - |
| LJF41_RS13535 (LJF41_13535) | 2711033..2711158 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| LJF41_RS13540 (LJF41_13540) | 2711158..2711338 | + | 181 | Protein_2629 | IS3 family transposase | - |
| LJF41_RS13545 (LJF41_13545) | 2711728..2711928 | + | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| LJF41_RS23385 | 2712025..2712372 | - | 348 | Protein_2631 | tail assembly chaperone | - |
| LJF41_RS13550 (LJF41_13550) | 2712373..2713428 | - | 1056 | Protein_2632 | tail fiber protein | - |
| LJF41_RS13555 (LJF41_13555) | 2713352..2713919 | - | 568 | Protein_2633 | phage terminase large subunit family protein | - |
| LJF41_RS13560 (LJF41_13560) | 2713906..2714397 | - | 492 | WP_000348547.1 | DUF1441 family protein | - |
| LJF41_RS13565 (LJF41_13565) | 2714700..2714867 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF41_RS13570 (LJF41_13570) | 2715124..2715656 | - | 533 | Protein_2636 | DUF2514 domain-containing protein | - |
| LJF41_RS13575 (LJF41_13575) | 2715653..2715901 | - | 249 | Protein_2637 | glycoside hydrolase family 19 protein | - |
| LJF41_RS13580 (LJF41_13580) | 2715893..2717041 | + | 1149 | Protein_2638 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LJF41_RS13585 (LJF41_13585) | 2717074..2718153 | + | 1080 | WP_000087641.1 | hypothetical protein ; Integrase | Integrase |
| - | 2718282..2718425 | + | 144 | - | - | Antitoxin Detail |
| - | 2718284..2718387 | - | 104 | - | - | Toxin Detail |
| LJF41_RS13590 (LJF41_13590) | 2718528..2718881 | - | 354 | WP_000722363.1 | YebY family protein | - |
| LJF41_RS13595 (LJF41_13595) | 2718898..2719773 | - | 876 | WP_000979695.1 | copper homeostasis membrane protein CopD | - |
| LJF41_RS13600 (LJF41_13600) | 2719774..2720148 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF41_RS13605 (LJF41_13605) | 2720286..2720516 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF41_RS13610 (LJF41_13610) | 2720624..2721280 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF41_RS13615 (LJF41_13615) | 2721304..2722002 | + | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| LJF41_RS13620 (LJF41_13620) | 2722039..2724090 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF41_RS13625 (LJF41_13625) | 2724303..2724962 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| LJF41_RS13630 (LJF41_13630) | 2725056..2725409 | - | 354 | WP_001042123.1 | protein YebF | - |
| LJF41_RS13635 (LJF41_13635) | 2725477..2725767 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF41_RS13640 (LJF41_13640) | 2725898..2727076 | + | 1179 | WP_000173436.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF41_RS13645 (LJF41_13645) | 2727176..2727817 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|