MGE detailed information
MGE type: Genomic_island MGE length: 16897 bp
Accession: NZ_CP085809 Location: 3858767..3875663 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Raikou Replicon: chromosome
Accession: NZ_CP085809 Location: 3858767..3875663 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Raikou Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF43_RS19025 (LJF43_19030) | 3854463..3855326 | - | 864 | WP_001270764.1 | LysR family transcriptional regulator | - |
| LJF43_RS19030 (LJF43_19035) | 3855430..3855885 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF43_RS19035 (LJF43_19040) | 3856027..3857256 | + | 1230 | WP_000036836.1 | amino acid permease | - |
| LJF43_RS19040 (LJF43_19045) | 3857287..3857559 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF43_RS19045 (LJF43_19050) | 3857681..3858557 | + | 877 | Protein_3725 | nickel/cobalt efflux protein RcnA | - |
| LJF43_RS19050 (LJF43_19055) | 3858767..3859525 | - | 759 | WP_000134788.1 | transcriptional regulator | - |
| LJF43_RS19055 (LJF43_19060) | 3859512..3860024 | - | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF43_RS19060 (LJF43_19065) | 3860169..3861245 | - | 1077 | WP_000141334.1 | hypothetical protein | - |
| LJF43_RS19065 (LJF43_19070) | 3861242..3861985 | - | 744 | WP_000798497.1 | hypothetical protein | VF |
| LJF43_RS19070 (LJF43_19075) | 3862026..3864515 | - | 2490 | WP_050153546.1 | hypothetical protein | VF |
| LJF43_RS19075 (LJF43_19080) | 3864635..3865216 | - | 582 | WP_001244646.1 | hypothetical protein | VF |
| LJF43_RS19080 (LJF43_19085) | 3865935..3866567 | - | 633 | WP_000835268.1 | YfdX family protein | - |
| LJF43_RS19085 (LJF43_19090) | 3866614..3867150 | - | 537 | WP_001038500.1 | hypothetical protein | VF |
| LJF43_RS19090 (LJF43_19095) | 3867957..3868355 | - | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF43_RS19095 (LJF43_19100) | 3868355..3868582 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF43_RS19100 (LJF43_19105) | 3868759..3869010 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| LJF43_RS19105 (LJF43_19110) | 3869285..3870091 | + | 807 | WP_227761088.1 | DUF1460 domain-containing protein | - |
| LJF43_RS19110 (LJF43_19115) | 3870724..3871845 | - | 1122 | WP_000028980.1 | hypothetical protein | - |
| LJF43_RS19115 (LJF43_19120) | 3871947..3872402 | - | 456 | WP_223229661.1 | hypothetical protein | - |
| LJF43_RS19120 (LJF43_19125) | 3872485..3872688 | - | 204 | WP_000184036.1 | hypothetical protein | - |
| LJF43_RS19125 (LJF43_19130) | 3872692..3873411 | - | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| LJF43_RS19130 (LJF43_19135) | 3874347..3875966 | - | 1620 | WP_014341476.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LJF43_RS19140 (LJF43_19145) | 3876254..3877012 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF43_RS19145 (LJF43_19150) | 3877277..3877822 | + | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF43_RS19150 (LJF43_19155) | 3877898..3879415 | - | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|