NZ_CP0858083670496..3804736

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 134241 bp
Accession: NZ_CP085808        Location: 3670496..3804736         Organism: Salmonella enterica subsp. enterica serovar Typhi strain Entei       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LJF44_RS18120 (LJF44_18125) 3666295..3667596 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
LJF44_RS18125 (LJF44_18130) 3667717..3668064 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
LJF44_RS18130 (LJF44_18135) 3668040..3669743 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
LJF44_RS18135 (LJF44_18140) 3669780..3670355 + 576 WP_001188506.1 transcriptional regulator -
LJF44_RS18145 (LJF44_18150) 3670706..3671965 + 1260 WP_000954536.1 hypothetical protein ; Integrase Integrase
LJF44_RS18150 (LJF44_18155) 3672276..3673559 + 1284 WP_000975154.1 SH3 domain-containing protein -
LJF44_RS18155 (LJF44_18160) 3673644..3673913 + 270 Protein_3547 integrase -
LJF44_RS18160 (LJF44_18165) 3674540..3675322 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
LJF44_RS18165 (LJF44_18170) 3675592..3675786 + 195 WP_162009227.1 hypothetical protein -
LJF44_RS18170 (LJF44_18175) 3676179..3676400 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
LJF44_RS18175 (LJF44_18180) 3676397..3676858 - 462 WP_000246267.1 hypothetical protein -
LJF44_RS18180 (LJF44_18185) 3677405..3679078 + 1674 WP_010989301.1 hypothetical protein -
LJF44_RS18185 (LJF44_18190) 3679159..3681444 + 2286 WP_010989300.1 hypothetical protein -
LJF44_RS18190 (LJF44_18195) 3681748..3681999 + 252 WP_024131240.1 hypothetical protein -
LJF44_RS18195 (LJF44_18200) 3682081..3682533 + 453 WP_000434168.1 hypothetical protein -
LJF44_RS18200 (LJF44_18205) 3682713..3683201 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
LJF44_RS18205 (LJF44_18210) 3683198..3683491 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
LJF44_RS18210 (LJF44_18215) 3683918..3684931 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
LJF44_RS18215 (LJF44_18220) 3685095..3686684 - 1590 WP_000488995.1 TraI domain-containing protein -
LJF44_RS18220 (LJF44_18225) 3686668..3688179 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
LJF44_RS18225 (LJF44_18230) 3689033..3689572 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
LJF44_RS18230 (LJF44_18235) 3689817..3691094 + 1278 WP_000466893.1 UDP-N-acetyl-D-mannosamine dehydrogenase VF
LJF44_RS18235 (LJF44_18240) 3691097..3692143 + 1047 WP_050190110.1 GDP-mannose 4,6-dehydratase VF
LJF44_RS18240 (LJF44_18245) 3692167..3694662 + 2496 WP_010989299.1 hypothetical protein VF
LJF44_RS18245 (LJF44_18250) 3694662..3696398 + 1737 WP_000632616.1 Glycosyltransferase Gtf1 VF
LJF44_RS18250 (LJF44_18255) 3696443..3697510 + 1068 WP_000720235.1 hypothetical protein VF
LJF44_RS18255 (LJF44_18260) 3697520..3698314 + 795 WP_001023498.1 hypothetical protein VF
LJF44_RS18260 (LJF44_18265) 3698340..3699035 + 696 WP_000467404.1 hypothetical protein VF
LJF44_RS18265 (LJF44_18270) 3699058..3700362 + 1305 WP_000431675.1 hypothetical protein VF
LJF44_RS18270 (LJF44_18275) 3700382..3702352 + 1971 WP_000052242.1 Beta-barrel assembly-enhancing protease VF
LJF44_RS18275 (LJF44_18280) 3702654..3703400 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
LJF44_RS18280 (LJF44_18285) 3703400..3704290 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
LJF44_RS18285 (LJF44_18290) 3704301..3704558 - 258 WP_001681810.1 YjhX family toxin -
LJF44_RS18290 (LJF44_18295) 3704860..3704970 - 111 Protein_3574 autoinducer 2 ABC transporter substrate-binding protein -
LJF44_RS18295 (LJF44_18300) 3705205..3705549 + 345 Protein_3575 translesion error-prone DNA polymerase V autoproteolytic subunit -
LJF44_RS18300 (LJF44_18305) 3705665..3706690 - 1026 WP_000027757.1 Tyrosine recombinase XerD ; Integrase Integrase
LJF44_RS18305 (LJF44_18310) 3706694..3707326 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
LJF44_RS18310 (LJF44_18315) 3707443..3707685 + 243 WP_000102106.1 Rha family transcriptional regulator -
LJF44_RS18315 (LJF44_18320) 3707718..3708227 + 510 WP_000460852.1 phage regulatory CII family protein -
LJF44_RS18320 (LJF44_18325) 3708235..3708435 + 201 WP_000956167.1 DUF2724 domain-containing protein -
LJF44_RS18325 (LJF44_18330) 3708399..3708740 + 342 WP_000963479.1 DUF5347 family protein -
LJF44_RS18330 (LJF44_18335) 3708808..3709041 + 234 WP_001244240.1 DUF2732 family protein -
LJF44_RS18335 (LJF44_18340) 3709041..3709268 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
LJF44_RS18340 (LJF44_18345) 3709265..3709441 + 177 Protein_3584 3'-5' exonuclease -
LJF44_RS18345 (LJF44_18350) 3709548..3710756 + 1209 WP_001339197.1 IS4 family transposase IS10R Transposase
LJF44_RS18350 (LJF44_18355) 3710771..3711187 + 417 Protein_3586 3'-5' exonuclease -
LJF44_RS18355 (LJF44_18360) 3711184..3712044 + 861 WP_000104130.1 DNA adenine methylase -
LJF44_RS18360 (LJF44_18365) 3712035..3714430 + 2396 Protein_3588 replication endonuclease -
LJF44_RS18365 (LJF44_18370) 3714598..3714786 + 189 WP_001154438.1 hypothetical protein -
LJF44_RS18370 (LJF44_18375) 3714798..3715031 + 234 WP_001217561.1 DinI family protein -
LJF44_RS18375 (LJF44_18380) 3715127..3715345 + 219 WP_000835188.1 hypothetical protein -
LJF44_RS18380 (LJF44_18385) 3715355..3716419 + 1065 WP_000829584.1 hypothetical protein -
LJF44_RS18385 (LJF44_18390) 3716416..3717480 + 1065 WP_000789323.1 hypothetical protein -
LJF44_RS18390 (LJF44_18395) 3717500..3718195 + 696 WP_000080839.1 hypothetical protein -
LJF44_RS18395 (LJF44_18400) 3718244..3719287 - 1044 WP_001681813.1 phage portal protein -
LJF44_RS18400 (LJF44_18405) 3719287..3721053 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
LJF44_RS18405 (LJF44_18410) 3721196..3722029 + 834 WP_000216272.1 GPO family capsid scaffolding protein -
LJF44_RS18410 (LJF44_18415) 3722046..3723110 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
LJF44_RS18415 (LJF44_18420) 3723114..3723764 + 651 WP_000059175.1 terminase endonuclease subunit -
LJF44_RS18420 (LJF44_18425) 3723858..3724322 + 465 WP_000673540.1 head completion/stabilization protein -
LJF44_RS18425 (LJF44_18430) 3724322..3724525 + 204 WP_000868184.1 tail protein X -
LJF44_RS18430 (LJF44_18435) 3724529..3724744 + 216 WP_000171566.1 HP1 family phage holin -
LJF44_RS18435 (LJF44_18440) 3724725..3725234 + 510 WP_001097942.1 lysozyme -
LJF44_RS18440 (LJF44_18445) 3725239..3725616 + 378 WP_000731034.1 DNZ54_00345 family protein -
LJF44_RS18445 (LJF44_18450) 3725613..3726041 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
LJF44_RS18450 (LJF44_18455) 3725926..3726174 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
LJF44_RS18455 (LJF44_18460) 3726137..3726568 + 432 WP_001039966.1 phage tail protein -
LJF44_RS18460 (LJF44_18465) 3726561..3727007 + 447 WP_000343944.1 phage virion morphogenesis protein -
LJF44_RS18465 (LJF44_18470) 3727076..3727654 + 579 WP_000993749.1 phage baseplate assembly protein V -
LJF44_RS18470 (LJF44_18475) 3727651..3728010 + 360 WP_000177408.1 GPW/gp25 family protein -
LJF44_RS18475 (LJF44_18480) 3727997..3728905 + 909 WP_000268327.1 baseplate assembly protein -
LJF44_RS18480 (LJF44_18485) 3728898..3729503 + 606 WP_001086816.1 phage tail protein I -
LJF44_RS18485 (LJF44_18490) 3729500..3731119 + 1620 WP_000104806.1 phage tail protein -
LJF44_RS18490 (LJF44_18495) 3731126..3731533 + 408 WP_000006337.1 tail fiber assembly protein -
LJF44_RS18495 (LJF44_18500) 3731731..3732453 - 723 WP_000161708.1 hypothetical protein VF
LJF44_RS18500 (LJF44_18505) 3732664..3732885 + 222 Protein_3616 helix-turn-helix domain-containing protein -
LJF44_RS18505 (LJF44_18510) 3732988..3734160 + 1173 WP_000046101.1 phage tail sheath protein -
LJF44_RS18510 (LJF44_18515) 3734170..3734685 + 516 WP_001207653.1 phage major tail tube protein -
LJF44_RS18515 (LJF44_18520) 3734740..3735042 + 303 WP_001280965.1 phage tail assembly protein -
LJF44_RS18520 (LJF44_18525) 3735057..3735176 + 120 WP_000763315.1 GpE family phage tail protein -
LJF44_RS18525 (LJF44_18530) 3735169..3737949 + 2781 WP_001282813.1 phage tail tape measure protein -
LJF44_RS18530 (LJF44_18535) 3737949..3738434 + 486 WP_000980405.1 phage tail protein -
LJF44_RS18535 (LJF44_18540) 3738431..3739531 + 1101 WP_001011750.1 phage late control D family protein -
LJF44_RS18540 (LJF44_18545) 3739599..3739817 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
LJF44_RS18545 (LJF44_18550) 3739904..3740281 - 378 WP_001039750.1 hypothetical protein -
LJF44_RS18550 (LJF44_18555) 3740415..3740501 + 87 Protein_3626 peptidase -
LJF44_RS18555 (LJF44_18560) 3740501..3741775 + 1275 WP_000457555.1 Y-family DNA polymerase -
LJF44_RS18560 (LJF44_18565) 3741907..3742176 + 270 WP_001222413.1 hypothetical protein -
LJF44_RS18565 (LJF44_18570) 3742276..3742602 - 327 WP_000911568.1 DUF3085 domain-containing protein -
LJF44_RS18570 (LJF44_18575) 3742677..3743576 - 900 WP_000022216.1 hypothetical protein -
LJF44_RS18575 (LJF44_18580) 3743650..3744558 - 909 WP_000881183.1 hypothetical protein -
LJF44_RS18580 (LJF44_18585) 3744630..3746579 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
LJF44_RS18585 (LJF44_18590) 3746668..3747126 - 459 WP_000115421.1 hypothetical protein -
LJF44_RS18590 (LJF44_18595) 3747204..3747500 - 297 WP_000968700.1 hypothetical protein -
LJF44_RS18595 (LJF44_18600) 3747497..3747949 - 453 WP_000979718.1 hypothetical protein -
LJF44_RS18600 (LJF44_18605) 3747967..3748176 - 210 WP_000018145.1 hypothetical protein -
LJF44_RS18605 (LJF44_18610) 3748547..3748927 - 381 WP_001103837.1 hypothetical protein -
LJF44_RS18610 (LJF44_18615) 3749023..3749325 - 303 WP_001020123.1 hypothetical protein -
LJF44_RS18615 (LJF44_18620) 3750049..3750969 - 921 WP_000907593.1 Tyrosine recombinase XerC ; Integrase Integrase
LJF44_RS18620 (LJF44_18625) 3752235..3752777 + 543 WP_010989295.1 DUF1062 domain-containing protein -
LJF44_RS18625 (LJF44_18630) 3752988..3753629 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
LJF44_RS18630 (LJF44_18635) 3753614..3754861 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
LJF44_RS18635 (LJF44_18640) 3755149..3755508 + 360 WP_010989293.1 hypothetical protein -
LJF44_RS18640 (LJF44_18645) 3755732..3756121 + 390 WP_000993574.1 hypothetical protein -
LJF44_RS18645 (LJF44_18650) 3756157..3757662 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
LJF44_RS18650 (LJF44_18655) 3757995..3759392 - 1398 WP_014341560.1 integrating conjugative element protein -
LJF44_RS18655 (LJF44_18660) 3759440..3760408 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
LJF44_RS18660 (LJF44_18665) 3760405..3760797 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
LJF44_RS18665 (LJF44_18670) 3760952..3761338 - 387 WP_000054770.1 hypothetical protein -
LJF44_RS18670 (LJF44_18675) 3761493..3764205 - 2713 Protein_3650 conjugative transfer ATPase -
LJF44_RS18675 (LJF44_18680) 3764328..3764777 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
LJF44_RS18680 (LJF44_18685) 3764764..3766242 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
LJF44_RS18685 (LJF44_18690) 3766232..3767131 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
LJF44_RS18690 (LJF44_18695) 3767131..3767784 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
LJF44_RS18695 (LJF44_18700) 3767781..3768155 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
LJF44_RS18700 (LJF44_18705) 3768165..3768530 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
LJF44_RS18705 (LJF44_18710) 3768557..3768790 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
LJF44_RS18710 (LJF44_18715) 3768796..3769068 - 273 WP_001686573.1 RAQPRD family integrative conjugative element protein -
LJF44_RS18715 (LJF44_18720) 3769287..3770045 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
LJF44_RS18720 (LJF44_18725) 3770042..3772132 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
LJF44_RS18725 (LJF44_18730) 3772152..3772721 - 570 WP_000626967.1 restriction endonuclease -
LJF44_RS18730 (LJF44_18735) 3772731..3773231 - 501 WP_000253629.1 integrating conjugative element protein -
LJF44_RS18735 (LJF44_18740) 3773267..3773953 - 687 WP_000013624.1 hypothetical protein VF
LJF44_RS18740 (LJF44_18745) 3773932..3774618 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
LJF44_RS18745 (LJF44_18750) 3774691..3775605 - 915 WP_000214158.1 hypothetical protein -
LJF44_RS18750 (LJF44_18755) 3775562..3775924 - 363 WP_001149494.1 hypothetical protein -
LJF44_RS18755 (LJF44_18760) 3776112..3776987 - 876 WP_000994659.1 hypothetical protein -
LJF44_RS18760 (LJF44_18765) 3777199..3777666 - 468 WP_000455463.1 hypothetical protein -
LJF44_RS18765 (LJF44_18770) 3777763..3778914 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
LJF44_RS18770 (LJF44_18775) 3779265..3780569 - 1305 WP_000744277.1 hypothetical protein VF
LJF44_RS18775 (LJF44_18780) 3780566..3781228 - 663 WP_000218700.1 hypothetical protein VF
LJF44_RS18780 (LJF44_18785) 3781225..3781668 - 444 WP_223228896.1 hypothetical protein VF
LJF44_RS18785 (LJF44_18790) 3781711..3782307 - 597 WP_024131234.1 hypothetical protein VF
LJF44_RS18790 (LJF44_18795) 3782346..3783431 - 1086 WP_000074784.1 hypothetical protein VF
LJF44_RS18795 (LJF44_18800) 3783428..3785143 - 1716 WP_001289222.1 hypothetical protein VF
LJF44_RS18800 (LJF44_18805) 3785153..3785533 - 381 WP_014341558.1 hypothetical protein VF
LJF44_RS18805 (LJF44_18810) 3785721..3787007 - 1287 WP_000763621.1 hypothetical protein VF
LJF44_RS18810 (LJF44_18815) 3787009..3787347 - 339 WP_048657783.1 hypothetical protein VF
LJF44_RS18815 (LJF44_18820) 3787313..3788248 - 936 WP_049783585.1 hypothetical protein VF
LJF44_RS18820 (LJF44_18825) 3788719..3789138 - 420 WP_000539682.1 hypothetical protein VF
LJF44_RS18825 (LJF44_18830) 3789141..3790385 - 1245 WP_001095932.1 hypothetical protein VF
LJF44_RS18830 (LJF44_18835) 3790550..3791500 - 951 Protein_3682 hypothetical protein VF
LJF44_RS18835 (LJF44_18840) 3791566..3792102 - 537 WP_000157067.1 single-stranded DNA-binding protein -
LJF44_RS18840 (LJF44_18845) 3792115..3792333 - 219 WP_000958171.1 hypothetical protein -
LJF44_RS18845 (LJF44_18850) 3792414..3792863 - 450 WP_000032521.1 STY4534 family ICE replication protein -
LJF44_RS18850 (LJF44_18855) 3793531..3795525 - 1995 WP_227761082.1 DNA topoisomerase III -
LJF44_RS18855 (LJF44_18860) 3795636..3796412 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
LJF44_RS18860 (LJF44_18865) 3797001..3798311 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
LJF44_RS18865 (LJF44_18870) 3798341..3798589 - 249 WP_000377625.1 hypothetical protein -
LJF44_RS18870 (LJF44_18875) 3798589..3799146 - 558 WP_000144322.1 DUF2857 domain-containing protein -
LJF44_RS18875 (LJF44_18880) 3799231..3799953 - 723 WP_001275616.1 DUF2786 domain-containing protein -
LJF44_RS18880 (LJF44_18885) 3799940..3800200 - 261 WP_000838568.1 hypothetical protein -
LJF44_RS18890 (LJF44_18895) 3800414..3802213 - 1800 WP_001029724.1 ParB family protein -
LJF44_RS18895 (LJF44_18900) 3802206..3803570 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
LJF44_RS18900 (LJF44_18905) 3803567..3804601 - 1035 WP_001195363.1 hypothetical protein VF
LJF44_RS18905 (LJF44_18910) 3804815..3804889 - 75 Protein_3696 helix-turn-helix domain-containing protein -
LJF44_RS18910 (LJF44_18915) 3805269..3805346 + 78 Protein_3697 porin family protein -
LJF44_RS18915 (LJF44_18920) 3805446..3806198 + 753 WP_001785756.1 non-specific acid phosphatase -
LJF44_RS18920 (LJF44_18925) 3806439..3806930 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
LJF44_RS18925 (LJF44_18930) 3806927..3807220 - 294 WP_001110456.1 DUF1778 domain-containing protein -
LJF44_RS18930 (LJF44_18935) 3807537..3807759 + 223 Protein_3701 hypothetical protein -
LJF44_RS18935 (LJF44_18940) 3808025..3808900 + 876 WP_000921674.1 AraC family transcriptional regulator -
LJF44_RS18940 (LJF44_18945) 3808897..3809184 + 288 WP_001269916.1 transcriptional regulator RtsB -
LJF44_RS18945 (LJF44_18950) 3809207..3809423 + 217 Protein_3704 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance