MGE detailed information
MGE type: Genomic_island MGE length: 16152 bp
Accession: NZ_CP085807 Location: 920047..936198 Organism: Salmonella enterica subsp. enterica serovar Typhi strain Suicune Replicon: chromosome
Accession: NZ_CP085807 Location: 920047..936198 Organism: Salmonella enterica subsp. enterica serovar Typhi strain Suicune Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF45_RS04445 (LJF45_04445) | 915187..916285 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| LJF45_RS04450 (LJF45_04450) | 916295..917812 | + | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
| LJF45_RS04455 (LJF45_04455) | 917888..918433 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF45_RS04460 (LJF45_04460) | 918698..919456 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF45_RS04470 (LJF45_04470) | 919744..921363 | + | 1620 | WP_014341476.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| LJF45_RS04475 (LJF45_04475) | 922299..923018 | + | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| LJF45_RS04480 (LJF45_04480) | 923022..923225 | + | 204 | WP_000184036.1 | hypothetical protein | - |
| LJF45_RS04485 (LJF45_04485) | 923308..923763 | + | 456 | WP_223229661.1 | hypothetical protein | - |
| LJF45_RS04490 (LJF45_04490) | 923865..924986 | + | 1122 | WP_000028980.1 | hypothetical protein | - |
| LJF45_RS04495 (LJF45_04495) | 925619..926425 | - | 807 | WP_227761088.1 | DUF1460 domain-containing protein | - |
| LJF45_RS04500 (LJF45_04500) | 926700..926951 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| LJF45_RS04505 (LJF45_04505) | 927128..927355 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF45_RS04510 (LJF45_04510) | 927355..927753 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF45_RS04515 (LJF45_04515) | 928560..929096 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| LJF45_RS04520 (LJF45_04520) | 929143..929775 | + | 633 | WP_000835268.1 | YfdX family protein | - |
| LJF45_RS04525 (LJF45_04525) | 930494..931075 | + | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| LJF45_RS04530 (LJF45_04530) | 931195..933684 | + | 2490 | WP_050153546.1 | Outer membrane usher protein PapC | VF |
| LJF45_RS04535 (LJF45_04535) | 933725..934468 | + | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| LJF45_RS04540 (LJF45_04540) | 934465..935541 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
| LJF45_RS04545 (LJF45_04545) | 935686..936198 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF45_RS04550 (LJF45_04550) | 936185..936943 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
| LJF45_RS04555 (LJF45_04555) | 937153..938028 | - | 876 | Protein_879 | nickel/cobalt efflux protein RcnA | - |
| LJF45_RS04560 (LJF45_04560) | 938150..938422 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF45_RS04565 (LJF45_04565) | 938453..939682 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| LJF45_RS04570 (LJF45_04570) | 939824..940279 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|