MGE detailed information
MGE type: Prophage MGE length: 74044 bp
Accession: NZ_CP085803 Location: 1915973..1990016 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Glaceon Replicon: chromosome
Accession: NZ_CP085803 Location: 1915973..1990016 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Glaceon Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF50_RS09130 () | 1911099..1911620 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LJF50_RS09135 () | 1911622..1912221 | - | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| LJF50_RS09140 () | 1912430..1913122 | + | 693 | WP_001680382.1 | hypothetical protein | - |
| LJF50_RS09145 () | 1913482..1914093 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| LJF50_RS09150 () | 1914102..1915112 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LJF50_RS09155 () | 1915191..1915976 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| LJF50_RS09160 () | 1915973..1916728 | - | 756 | WP_000203023.1 | Zinc import ATP-binding protein ZnuC | VF |
| LJF50_RS09165 () | 1916807..1917751 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| LJF50_RS09170 () | 1917767..1919086 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| LJF50_RS09175 () | 1919203..1920174 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LJF50_RS09180 () | 1920247..1921689 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| LJF50_RS09185 () | 1921813..1922682 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| LJF50_RS09190 () | 1923024..1924499 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| LJF50_RS09195 () | 1924734..1926545 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| LJF50_RS09200 () | 1926583..1927224 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LJF50_RS09205 () | 1927324..1928502 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF50_RS09210 () | 1928633..1928923 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF50_RS09215 () | 1928991..1929344 | + | 354 | WP_001042123.1 | protein YebF | - |
| LJF50_RS09220 () | 1929438..1930097 | + | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LJF50_RS09225 () | 1930310..1932361 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF50_RS09230 () | 1932398..1933096 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF50_RS09235 () | 1933120..1933776 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF50_RS09240 () | 1933884..1934114 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF50_RS09245 () | 1934252..1934626 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF50_RS09250 () | 1934627..1935502 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF50_RS09255 () | 1935519..1935872 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 1935972..1936117 | - | 146 | - | - | Antitoxin Detail |
| - | 1936012..1936115 | + | 104 | - | - | Toxin Detail |
| LJF50_RS09260 () | 1936255..1937334 | - | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| LJF50_RS09265 () | 1937309..1937587 | - | 279 | WP_001575998.1 | excisionase | - |
| LJF50_RS09270 () | 1938001..1939980 | + | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF50_RS09275 () | 1940299..1940397 | + | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF50_RS09280 () | 1940699..1940917 | + | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF50_RS09285 () | 1940981..1941580 | + | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF50_RS23045 () | 1941583..1941804 | + | 222 | WP_254888507.1 | recombination protein NinG | - |
| LJF50_RS09295 () | 1941801..1941937 | + | 137 | Protein_1793 | YlcG family protein | - |
| LJF50_RS09300 () | 1941934..1942623 | + | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF50_RS09305 () | 1942717..1943244 | + | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF50_RS09310 () | 1943618..1944067 | - | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF50_RS09315 () | 1944428..1945114 | - | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF50_RS09320 () | 1945390..1945719 | + | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF50_RS09325 () | 1945703..1946155 | + | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LJF50_RS22995 () | 1946173..1946652 | + | 480 | WP_001541990.1 | lysis protein | - |
| LJF50_RS09340 () | 1946860..1947171 | + | 312 | Protein_1801 | DUF1441 family protein | - |
| LJF50_RS09345 () | 1947203..1947430 | + | 228 | Protein_1802 | outer membrane beta-barrel protein | - |
| LJF50_RS09350 () | 1947547..1948080 | - | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| LJF50_RS09355 () | 1948170..1948865 | + | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF50_RS09360 () | 1948875..1949135 | + | 261 | Protein_1805 | C40 family peptidase | - |
| LJF50_RS09365 () | 1949135..1951466 | + | 2332 | Protein_1806 | host specificity protein J | - |
| LJF50_RS09370 () | 1951536..1952369 | + | 834 | WP_077943317.1 | DUF1983 domain-containing protein | - |
| LJF50_RS09375 () | 1952374..1952718 | + | 345 | Protein_1808 | tail fiber assembly protein | - |
| LJF50_RS09380 () | 1952920..1953642 | - | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| LJF50_RS09385 () | 1953852..1954093 | + | 242 | Protein_1810 | recombinase family protein | - |
| LJF50_RS09390 () | 1954122..1954922 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF50_RS09395 () | 1955867..1956789 | - | 923 | Protein_1812 | hypothetical protein ; Integrase | Integrase |
| LJF50_RS09400 () | 1957053..1957514 | - | 462 | Protein_1813 | DNA breaking-rejoining protein | - |
| LJF50_RS09405 () | 1957503..1957694 | + | 192 | Protein_1814 | glycoside hydrolase family 19 protein | - |
| LJF50_RS09410 () | 1957748..1958281 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF50_RS09415 () | 1958538..1958705 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF50_RS09420 () | 1958770..1958958 | - | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF50_RS09425 () | 1959013..1959504 | + | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF50_RS09430 () | 1959491..1960058 | + | 568 | Protein_1819 | phage terminase large subunit family protein | - |
| LJF50_RS09435 () | 1960057..1961288 | + | 1232 | Protein_1820 | tail fiber protein | - |
| LJF50_RS23000 () | 1961298..1961585 | + | 288 | Protein_1821 | macro domain-containing protein | - |
| LJF50_RS09440 () | 1961598..1962109 | + | 512 | Protein_1822 | tail fiber assembly protein | - |
| LJF50_RS09445 () | 1962206..1962406 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF50_RS09450 () | 1962796..1962976 | - | 181 | Protein_1824 | IS3 family transposase | - |
| LJF50_RS09455 () | 1962967..1963068 | + | 102 | Protein_1825 | arsenic transporter | - |
| LJF50_RS09460 () | 1963677..1963909 | + | 233 | Protein_1826 | helix-turn-helix domain-containing protein | - |
| LJF50_RS09465 () | 1964236..1964850 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF50_RS09470 () | 1964860..1965018 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF50_RS09475 () | 1965151..1966065 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF50_RS09480 () | 1967315..1967781 | - | 467 | Protein_1830 | tyrosine-type recombinase/integrase | - |
| LJF50_RS09485 () | 1967851..1969058 | + | 1208 | Protein_1831 | IS256 family transposase ISEc39 | Transposase |
| LJF50_RS09490 () | 1969204..1969344 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF50_RS09495 () | 1969510..1969779 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF50_RS09500 () | 1970152..1970571 | + | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF50_RS09505 () | 1970944..1971420 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF50_RS09510 () | 1971750..1972145 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF50_RS09515 () | 1972829..1973551 | + | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LJF50_RS09520 () | 1973836..1974000 | + | 165 | WP_001134856.1 | membrane protein | - |
| LJF50_RS09525 () | 1974224..1974874 | + | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF50_RS09530 () | 1974893..1975084 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF50_RS09535 () | 1975195..1975431 | - | 237 | WP_024131108.1 | YebV family protein | - |
| LJF50_RS09540 () | 1975549..1976988 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF50_RS09545 () | 1977066..1979699 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| LJF50_RS09550 () | 1979668..1980951 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LJF50_RS09555 () | 1981080..1981577 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF50_RS09560 () | 1981675..1982361 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF50_RS09565 () | 1982381..1984429 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LJF50_RS09570 () | 1984623..1985504 | + | 882 | WP_000984498.1 | protease HtpX | - |
| LJF50_RS09575 () | 1985552..1986925 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| LJF50_RS09580 () | 1987101..1987892 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LJF50_RS09585 () | 1988104..1988343 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| LJF50_RS09590 () | 1988501..1988644 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LJF50_RS09595 () | 1988715..1989002 | + | 288 | WP_001000660.1 | YebO family protein | - |
| LJF50_RS09600 () | 1989651..1989794 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LJF50_RS09605 () | 1989807..1990016 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LJF50_RS09610 () | 1990236..1991981 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LJF50_RS09615 () | 1992047..1992856 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LJF50_RS09620 () | 1992853..1993419 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LJF50_RS09625 () | 1993829..1994287 | - | 459 | WP_000156284.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|