MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085800 Location: 4381073..4392428 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Taillow Replicon: chromosome
Accession: NZ_CP085800 Location: 4381073..4392428 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Taillow Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF53_RS21415 (4376519) | 4376519..4377617 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF53_RS21420 (4377627) | 4377627..4379144 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF53_RS21425 (4379220) | 4379220..4379765 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF53_RS21430 (4380030) | 4380030..4380788 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF53_RS21440 (4381073) | 4381073..4381879 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF53_RS21445 (4382159) | 4382159..4382410 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF53_RS21450 (4382619) | 4382619..4382846 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF53_RS21455 (4382846) | 4382846..4383244 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF53_RS21460 (4384052) | 4384052..4384588 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF53_RS21465 (4384635) | 4384635..4385267 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF53_RS21470 (4385986) | 4385986..4386567 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF53_RS21475 (4386687) | 4386687..4389170 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF53_RS21480 (4389211) | 4389211..4389954 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF53_RS21485 (4389951) | 4389951..4391027 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF53_RS21490 (4391171) | 4391171..4391683 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF53_RS21495 (4391670) | 4391670..4392428 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF53_RS21500 (4392638) | 4392638..4393492 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| LJF53_RS21505 (4393614) | 4393614..4393886 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF53_RS21510 (4393917) | 4393917..4395146 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF53_RS21515 (4395288) | 4395288..4395743 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF53_RS21520 (4395847) | 4395847..4396710 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |