MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085798 Location: 368651..380006 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Latias Replicon: chromosome
Accession: NZ_CP085798 Location: 368651..380006 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Latias Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF55_RS01795 (364097) | 364097..365195 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF55_RS01800 (365205) | 365205..366722 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF55_RS01805 (366798) | 366798..367343 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF55_RS01810 (367608) | 367608..368366 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF55_RS01820 (368651) | 368651..369457 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF55_RS01825 (369737) | 369737..369988 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF55_RS01830 (370197) | 370197..370424 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF55_RS01835 (370424) | 370424..370822 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF55_RS01840 (371630) | 371630..372166 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| LJF55_RS01845 (372213) | 372213..372845 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF55_RS01850 (373564) | 373564..374145 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| LJF55_RS01855 (374265) | 374265..376748 | + | 2484 | WP_000705505.1 | hypothetical protein | VF |
| LJF55_RS01860 (376789) | 376789..377532 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| LJF55_RS01865 (377529) | 377529..378605 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF55_RS01870 (378749) | 378749..379261 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF55_RS01875 (379248) | 379248..380006 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF55_RS01880 (380216) | 380216..381064 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF55_RS01885 (381186) | 381186..381458 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF55_RS01890 (381489) | 381489..382718 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF55_RS01895 (382860) | 382860..383315 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF55_RS01900 (383419) | 383419..384282 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |