MGE detailed information
MGE type: Prophage MGE length: 41836 bp
Accession: NZ_CP085797 Location: 3750874..3792709 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Latios Replicon: chromosome
Accession: NZ_CP085797 Location: 3750874..3792709 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Latios Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF56_RS18110 () | 3746031..3747470 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF56_RS18115 () | 3747588..3747824 | + | 237 | WP_024131108.1 | YebV family protein | - |
| LJF56_RS18120 () | 3747935..3748126 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF56_RS18125 () | 3748145..3748795 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF56_RS18130 () | 3749019..3749183 | - | 165 | WP_001134856.1 | membrane protein | - |
| LJF56_RS18135 () | 3749468..3750190 | - | 723 | WP_000182071.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE2 | - |
| LJF56_RS18140 () | 3750874..3751269 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF56_RS18145 () | 3751599..3752075 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF56_RS18150 () | 3752448..3752867 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF56_RS18155 () | 3753240..3753509 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF56_RS18160 () | 3753675..3753815 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF56_RS18165 () | 3753961..3755168 | - | 1208 | Protein_3534 | IS256 family transposase ISEc39 | Transposase |
| LJF56_RS18170 () | 3755238..3755704 | + | 467 | Protein_3535 | tyrosine-type recombinase/integrase | - |
| LJF56_RS18175 () | 3756954..3757868 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF56_RS18180 () | 3758001..3758159 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF56_RS18185 () | 3758169..3758783 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF56_RS18190 () | 3759110..3759342 | - | 233 | Protein_3539 | helix-turn-helix domain-containing protein | - |
| LJF56_RS18195 () | 3759951..3760052 | - | 102 | Protein_3540 | arsenic transporter | - |
| LJF56_RS18200 () | 3760043..3760223 | + | 181 | Protein_3541 | IS3 family transposase | - |
| LJF56_RS18205 () | 3760613..3760813 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF56_RS18210 () | 3760910..3761421 | - | 512 | Protein_3543 | tail fiber assembly protein | - |
| LJF56_RS22995 () | 3761434..3761721 | - | 288 | Protein_3544 | macro domain-containing protein | - |
| LJF56_RS18215 () | 3761731..3762962 | - | 1232 | Protein_3545 | tail fiber protein | - |
| LJF56_RS18220 () | 3762961..3763528 | - | 568 | Protein_3546 | phage terminase large subunit family protein | - |
| LJF56_RS18225 () | 3763515..3764006 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF56_RS18230 () | 3764061..3764249 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF56_RS18235 () | 3764314..3764481 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF56_RS18240 () | 3764738..3765271 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF56_RS18245 () | 3765325..3765516 | - | 192 | Protein_3551 | glycoside hydrolase family 19 protein | - |
| LJF56_RS18250 () | 3765505..3765966 | + | 462 | Protein_3552 | DNA breaking-rejoining protein | - |
| LJF56_RS18255 () | 3766230..3767152 | + | 923 | Protein_3553 | hypothetical protein ; Integrase | Integrase |
| LJF56_RS18260 () | 3768097..3768897 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF56_RS18265 () | 3768926..3769167 | - | 242 | Protein_3555 | recombinase family protein | - |
| LJF56_RS18270 () | 3769377..3770099 | + | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| LJF56_RS18275 () | 3770301..3770645 | - | 345 | Protein_3557 | tail fiber assembly protein | - |
| LJF56_RS18280 () | 3770650..3771513 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| LJF56_RS18285 () | 3771553..3773884 | - | 2332 | Protein_3559 | host specificity protein J | - |
| LJF56_RS18290 () | 3773884..3774144 | - | 261 | Protein_3560 | C40 family peptidase | - |
| LJF56_RS18295 () | 3774154..3774849 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF56_RS18300 () | 3774939..3775472 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| LJF56_RS18305 () | 3775589..3775816 | - | 228 | Protein_3563 | outer membrane beta-barrel protein | - |
| LJF56_RS18310 () | 3775848..3776159 | - | 312 | Protein_3564 | DUF1441 family protein | - |
| LJF56_RS23000 () | 3776367..3776846 | - | 480 | WP_001541990.1 | lysis protein | - |
| LJF56_RS18325 () | 3776864..3777316 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LJF56_RS18330 () | 3777300..3777629 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF56_RS18335 () | 3777905..3778591 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF56_RS18340 () | 3778952..3779401 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF56_RS18345 () | 3779775..3780302 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF56_RS18350 () | 3780396..3781085 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF56_RS18355 () | 3781082..3781218 | - | 137 | Protein_3572 | YlcG family protein | - |
| LJF56_RS23045 () | 3781215..3781436 | - | 222 | WP_254888507.1 | recombination protein NinG | - |
| LJF56_RS18365 () | 3781439..3782038 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF56_RS18370 () | 3782102..3782320 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF56_RS18375 () | 3782622..3782720 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF56_RS18380 () | 3783039..3785018 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF56_RS18385 () | 3785432..3785710 | + | 279 | WP_001575998.1 | excisionase | - |
| LJF56_RS18390 () | 3785685..3786764 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 3786902..3787047 | + | 146 | - | - | Antitoxin Detail |
| - | 3786904..3787007 | - | 104 | - | - | Toxin Detail |
| LJF56_RS18395 () | 3787147..3787500 | - | 354 | WP_000722370.1 | YebY family protein | - |
| LJF56_RS18400 () | 3787517..3788392 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF56_RS18405 () | 3788393..3788767 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF56_RS18410 () | 3788905..3789135 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF56_RS18415 () | 3789243..3789899 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF56_RS18420 () | 3789923..3790621 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF56_RS18425 () | 3790658..3792709 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF56_RS18430 () | 3792922..3793581 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LJF56_RS18435 () | 3793675..3794028 | - | 354 | WP_001042123.1 | protein YebF | - |
| LJF56_RS18440 () | 3794096..3794386 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF56_RS18445 () | 3794517..3795695 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF56_RS18450 () | 3795795..3796436 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|