MGE detailed information
MGE type: Prophage MGE length: 59707 bp
Accession: NZ_CP085794 Location: 3151546..3211252 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Greninja Replicon: chromosome
Accession: NZ_CP085794 Location: 3151546..3211252 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Greninja Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF60_RS15010 () | 3147819..3148460 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LJF60_RS15015 () | 3148560..3149738 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF60_RS15020 () | 3149869..3150159 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF60_RS15025 () | 3150227..3150580 | + | 354 | WP_001042123.1 | protein YebF | - |
| LJF60_RS15030 () | 3150674..3151333 | + | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LJF60_RS15035 () | 3151546..3153597 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF60_RS15040 () | 3153634..3154332 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF60_RS15045 () | 3154356..3155012 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF60_RS15050 () | 3155120..3155350 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF60_RS15055 () | 3155488..3155862 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF60_RS15060 () | 3155863..3156738 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF60_RS15065 () | 3156755..3157108 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 3157208..3157353 | - | 146 | - | - | Antitoxin Detail |
| - | 3157248..3157351 | + | 104 | - | - | Toxin Detail |
| LJF60_RS15070 () | 3157491..3158570 | - | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| LJF60_RS15075 () | 3158545..3158823 | - | 279 | WP_001575998.1 | excisionase | - |
| LJF60_RS15080 () | 3159237..3161216 | + | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF60_RS15085 () | 3161535..3161633 | + | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF60_RS15090 () | 3161935..3162153 | + | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF60_RS15095 () | 3162217..3162816 | + | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF60_RS22800 () | 3162819..3163040 | + | 222 | WP_254888507.1 | recombination protein NinG | - |
| LJF60_RS15105 () | 3163037..3163173 | + | 137 | Protein_2925 | YlcG family protein | - |
| LJF60_RS15110 () | 3163170..3163859 | + | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF60_RS15115 () | 3163953..3164480 | + | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF60_RS15120 () | 3164854..3165303 | - | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF60_RS15125 () | 3165664..3166350 | - | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF60_RS15130 () | 3166626..3166955 | + | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF60_RS15135 () | 3166939..3167391 | + | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LJF60_RS22755 () | 3167409..3167888 | + | 480 | WP_001541990.1 | lysis protein | - |
| LJF60_RS15150 () | 3168096..3168407 | + | 312 | Protein_2933 | DUF1441 family protein | - |
| LJF60_RS15155 () | 3168439..3168666 | + | 228 | Protein_2934 | outer membrane beta-barrel protein | - |
| LJF60_RS15160 () | 3168783..3169316 | - | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| LJF60_RS15165 () | 3169406..3170101 | + | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF60_RS15170 () | 3170111..3170371 | + | 261 | Protein_2937 | C40 family peptidase | - |
| LJF60_RS15175 () | 3170371..3172702 | + | 2332 | Protein_2938 | host specificity protein J | - |
| LJF60_RS15180 () | 3172772..3173605 | + | 834 | WP_077943317.1 | DUF1983 domain-containing protein | - |
| LJF60_RS15185 () | 3173610..3173954 | + | 345 | Protein_2940 | tail fiber assembly protein | - |
| LJF60_RS15190 () | 3174156..3174878 | - | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| LJF60_RS15195 () | 3175088..3175329 | + | 242 | Protein_2942 | recombinase family protein | - |
| LJF60_RS15200 () | 3175358..3176158 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF60_RS15205 () | 3177103..3178025 | - | 923 | Protein_2944 | hypothetical protein ; Integrase | Integrase |
| LJF60_RS15210 () | 3178289..3178750 | - | 462 | Protein_2945 | DNA breaking-rejoining protein | - |
| LJF60_RS15215 () | 3178739..3178930 | + | 192 | Protein_2946 | glycoside hydrolase family 19 protein | - |
| LJF60_RS15220 () | 3178984..3179517 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF60_RS15225 () | 3179774..3179941 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF60_RS15230 () | 3180006..3180194 | - | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF60_RS15235 () | 3180249..3180740 | + | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF60_RS15240 () | 3180727..3181294 | + | 568 | Protein_2951 | phage terminase large subunit family protein | - |
| LJF60_RS15245 () | 3181293..3182524 | + | 1232 | Protein_2952 | tail fiber protein | - |
| LJF60_RS22760 () | 3182534..3182821 | + | 288 | Protein_2953 | macro domain-containing protein | - |
| LJF60_RS15250 () | 3182834..3183345 | + | 512 | Protein_2954 | tail fiber assembly protein | - |
| LJF60_RS15255 () | 3183442..3183642 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF60_RS15260 () | 3184032..3184212 | - | 181 | Protein_2956 | IS3 family transposase | - |
| LJF60_RS15265 () | 3184203..3184304 | + | 102 | Protein_2957 | arsenic transporter | - |
| LJF60_RS15270 () | 3184913..3185145 | + | 233 | Protein_2958 | helix-turn-helix domain-containing protein | - |
| LJF60_RS15275 () | 3185472..3186086 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF60_RS15280 () | 3186096..3186254 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF60_RS15285 () | 3186387..3187301 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF60_RS15290 () | 3188551..3189017 | - | 467 | Protein_2962 | tyrosine-type recombinase/integrase | - |
| LJF60_RS15295 () | 3189087..3190294 | + | 1208 | Protein_2963 | IS256 family transposase ISEc39 | Transposase |
| LJF60_RS15300 () | 3190440..3190580 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF60_RS15305 () | 3190746..3191015 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF60_RS15310 () | 3191388..3191807 | + | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF60_RS15315 () | 3192180..3192656 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF60_RS15320 () | 3192986..3193381 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF60_RS15325 () | 3194065..3194787 | + | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LJF60_RS15330 () | 3195072..3195236 | + | 165 | WP_001134856.1 | membrane protein | - |
| LJF60_RS15335 () | 3195460..3196110 | + | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF60_RS15340 () | 3196129..3196320 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF60_RS15345 () | 3196431..3196667 | - | 237 | WP_024131108.1 | YebV family protein | - |
| LJF60_RS15350 () | 3196785..3198224 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF60_RS15355 () | 3198302..3200935 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| LJF60_RS15360 () | 3200904..3202187 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LJF60_RS15365 () | 3202316..3202813 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF60_RS15370 () | 3202911..3203597 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF60_RS15375 () | 3203617..3205665 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LJF60_RS15380 () | 3205859..3206740 | + | 882 | WP_000984498.1 | protease HtpX | - |
| LJF60_RS15385 () | 3206788..3208161 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| LJF60_RS15390 () | 3208337..3209128 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LJF60_RS15395 () | 3209340..3209579 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| LJF60_RS15400 () | 3209737..3209880 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LJF60_RS15405 () | 3209951..3210238 | + | 288 | WP_001000660.1 | YebO family protein | - |
| LJF60_RS15410 () | 3210887..3211030 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LJF60_RS15415 () | 3211043..3211252 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LJF60_RS15420 () | 3211472..3213217 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LJF60_RS15425 () | 3213283..3214092 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LJF60_RS15430 () | 3214089..3214655 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LJF60_RS15435 () | 3215065..3215523 | - | 459 | WP_000156284.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|