MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP085699 Location: 2467966..2480051 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S29 Replicon: chromosome
Accession: NZ_CP085699 Location: 2467966..2480051 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJN59_RS12140 (2463887) | 2463887..2465089 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| LJN59_RS12145 (2465102) | 2465102..2466553 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| LJN59_RS12150 (2466697) | 2466697..2467704 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| LJN59_RS12155 (2467963) | 2467963..2469429 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| LJN59_RS12160 (2470237) | 2470237..2470951 | + | 715 | Protein_2380 | helix-turn-helix domain-containing protein | - |
| LJN59_RS12165 (2471007) | 2471007..2471915 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| LJN59_RS12170 (2472058) | 2472058..2472390 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| LJN59_RS12175 (2472380) | 2472380..2472595 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| LJN59_RS12180 (2472747) | 2472747..2472995 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LJN59_RS12185 (2472985) | 2472985..2473269 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LJN59_RS12190 (2473440) | 2473440..2473829 | + | 390 | WP_000194089.1 | RidA family protein | - |
| LJN59_RS12195 (2473881) | 2473881..2474960 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| LJN59_RS12200 (2475153) | 2475153..2475641 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| LJN59_RS12205 (2475686) | 2475686..2477194 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| LJN59_RS12210 (2477184) | 2477184..2478425 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| LJN59_RS12215 (2478495) | 2478495..2480051 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| LJN59_RS12220 (2480228) | 2480228..2481514 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| LJN59_RS12225 (2481489) | 2481489..2482514 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| LJN59_RS12230 (2482573) | 2482573..2483364 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| LJN59_RS12235 (2483410) | 2483410..2484165 | - | 756 | Protein_2395 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |