MGE detailed information
MGE type: IS/Tn MGE length: 579 bp
Accession: NZ_CP085633 Location: 3319562..3320140 Organism: Pectobacterium brasiliense strain TS20HJ1 Replicon: chromosome
Accession: NZ_CP085633 Location: 3319562..3320140 Organism: Pectobacterium brasiliense strain TS20HJ1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJQ72_RS14940 (LJQ72_14940) | 3315626..3315970 | + | 345 | WP_205566357.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LJQ72_RS14945 (LJQ72_14945) | 3315972..3316289 | + | 318 | WP_014916192.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| LJQ72_RS14950 (LJQ72_14950) | 3316377..3316592 | - | 216 | WP_010279992.1 | helix-turn-helix transcriptional regulator | - |
| LJQ72_RS14955 (LJQ72_14955) | 3316699..3316929 | + | 231 | WP_227527086.1 | helix-turn-helix transcriptional regulator | - |
| LJQ72_RS14960 (LJQ72_14960) | 3317012..3317230 | + | 219 | WP_227527087.1 | helix-turn-helix transcriptional regulator | - |
| LJQ72_RS14965 (LJQ72_14965) | 3317305..3318162 | + | 858 | WP_227527088.1 | hypothetical protein | - |
| LJQ72_RS14970 (LJQ72_14970) | 3318447..3318938 | - | 492 | WP_039498513.1 | GNAT family N-acetyltransferase | - |
| LJQ72_RS14975 (LJQ72_14975) | 3318942..3319211 | - | 270 | WP_039498514.1 | DUF1778 domain-containing protein | - |
| LJQ72_RS14980 (LJQ72_14980) | 3319562..3320140 | + | 579 | WP_227527089.1 | IS4 family transposase ISCro6 | Transposase |
| LJQ72_RS14985 (LJQ72_14985) | 3320461..3321666 | + | 1206 | WP_227527090.1 | ISL3 family transposase | - |
| LJQ72_RS14990 (LJQ72_14990) | 3321923..3322705 | + | 783 | WP_227527091.1 | HNH endonuclease | - |
| LJQ72_RS14995 (LJQ72_14995) | 3322828..3323223 | + | 396 | WP_227527092.1 | hypothetical protein | - |
| LJQ72_RS15000 (LJQ72_15000) | 3323216..3323629 | + | 414 | WP_227527093.1 | hypothetical protein | - |
| LJQ72_RS21475 | 3323704..3324024 | + | 321 | WP_265104160.1 | hypothetical protein | - |
| LJQ72_RS15010 (LJQ72_15010) | 3324154..3325014 | + | 861 | WP_227527094.1 | FRG domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|