MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 142829 bp
Accession: NZ_CP085622 Location: 4478835..4621663 Organism: Escherichia coli strain EC71 Replicon: chromosome
Accession: NZ_CP085622 Location: 4478835..4621663 Organism: Escherichia coli strain EC71 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJN53_RS21545 (4479298) | 4479298..4480155 | - | 858 | WP_000201827.1 | glutamate racemase | - |
| LJN53_RS21550 (4480100) | 4480100..4481944 | - | 1845 | WP_000591355.1 | TonB-dependent vitamin B12 receptor BtuB | - |
| LJN53_RS21555 (4482313) | 4482313..4483413 | + | 1101 | WP_000187022.1 | tRNA (uridine(54)-C5)-methyltransferase TrmA | - |
| LJN53_RS21560 (4483453) | 4483453..4483812 | - | 360 | WP_000806411.1 | YijD family membrane protein | - |
| LJN53_RS21565 (4483812) | 4483812..4484462 | - | 651 | WP_001309117.1 | HTH-type transcriptional repressor FabR | - |
| LJN53_RS21570 (4484793) | 4484793..4486193 | + | 1401 | WP_001120810.1 | Si-specific NAD(P)(+) transhydrogenase | - |
| LJN53_RS21575 (4486176) | 4486176..4487093 | - | 918 | WP_001025939.1 | HTH-type transcriptional regulator HdfR | VF |
| LJN53_RS21580 (4487345) | 4487345..4488628 | - | 1284 | WP_000382183.1 | MFS transporter | - |
| LJN53_RS21585 (4488695) | 4488695..4489909 | - | 1215 | WP_000690946.1 | D-galactonate dehydratase family protein | - |
| LJN53_RS21590 (4490407) | 4490407..4491780 | - | 1374 | WP_001230068.1 | argininosuccinate lyase | - |
| LJN53_RS21595 (4491841) | 4491841..4492617 | - | 777 | WP_001302318.1 | acetylglutamate kinase | - |
| LJN53_RS21600 (4492625) | 4492625..4493629 | - | 1005 | WP_175085574.1 | N-acetyl-gamma-glutamyl-phosphate reductase | - |
| LJN53_RS21605 (4493783) | 4493783..4494934 | + | 1152 | WP_001298964.1 | acetylornithine deacetylase | - |
| LJN53_RS21610 (4495286) | 4495286..4497937 | + | 2652 | WP_001005579.1 | phosphoenolpyruvate carboxylase | - |
| LJN53_RS21615 (4498120) | 4498120..4499853 | + | 1734 | WP_000556280.1 | phosphoethanolamine transferase CptA | - |
| LJN53_RS21620 (4500002) | 4500002..4500853 | + | 852 | WP_000274608.1 | HTH-type transcriptional activator RhaS | VF |
| LJN53_RS21625 (4500840) | 4500840..4501181 | - | 342 | WP_000323849.1 | PTS fructose-like transporter subunit IIB | - |
| LJN53_RS21630 (4501183) | 4501183..4502061 | - | 879 | WP_000204101.1 | [formate-C-acetyltransferase]-activating enzyme | - |
| LJN53_RS21635 (4502027) | 4502027..4504324 | - | 2298 | WP_000184827.1 | formate C-acetyltransferase | - |
| LJN53_RS21640 (4504375) | 4504375..4504695 | - | 321 | WP_000161265.1 | PTS fructose-like transporter subunit IIB | - |
| LJN53_RS21645 (4504710) | 4504710..4505789 | - | 1080 | WP_001004446.1 | PTS fructose transporter subunit EIIC | - |
| LJN53_RS21650 (4506098) | 4506098..4508599 | + | 2502 | WP_001174083.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| LJN53_RS21655 (4508611) | 4508611..4509273 | + | 663 | WP_000424845.1 | fructose-6-phosphate aldolase | - |
| LJN53_RS21660 (4509284) | 4509284..4510387 | + | 1104 | WP_000374004.1 | bifunctional L-1,2-propanediol dehydrogenase/glycerol dehydrogenase | - |
| LJN53_RS21665 (4510662) | 4510662..4511279 | + | 618 | WP_000647882.1 | DUF1287 domain-containing protein | - |
| LJN53_RS21670 (4511306) | 4511306..4512211 | - | 906 | WP_217823221.1 | cystine transporter YijE | - |
| LJN53_RS21675 (4512305) | 4512305..4514485 | - | 2181 | WP_001297636.1 | Catalase-peroxidase | VF |
| LJN53_RS21680 (4514814) | 4514814..4515704 | - | 891 | WP_000007523.1 | methylenetetrahydrofolate reductase | - |
| LJN53_RS25680 (4515780) | 4515780..4515914 | + | 135 | WP_000660586.1 | hypothetical protein | - |
| LJN53_RS21685 (4516053) | 4516053..4518485 | - | 2433 | WP_000110772.1 | bifunctional aspartate kinase/homoserine dehydrogenase II | - |
| LJN53_RS21690 (4518488) | 4518488..4519648 | - | 1161 | WP_001295694.1 | cystathionine gamma-synthase | - |
| LJN53_RS21695 (4519925) | 4519925..4520242 | + | 318 | WP_000852812.1 | met regulon transcriptional regulator MetJ | - |
| LJN53_RS21700 (4520426) | 4520426..4521034 | + | 609 | WP_000797350.1 | YiiX family permuted papain-like enzyme | - |
| LJN53_RS21705 (4521179) | 4521179..4521854 | + | 676 | Protein_4232 | IS1 family transposase | - |
| LJN53_RS21710 (4521941) | 4521941..4522264 | - | 324 | WP_001323627.1 | RHS element protein dsORF-f3 | - |
| LJN53_RS21715 (4522266) | 4522266..4526450 | - | 4185 | WP_053285920.1 | hypothetical protein | VF |
| LJN53_RS21720 (4526610) | 4526610..4526822 | - | 213 | WP_000710769.1 | 50S ribosomal protein L31 | - |
| LJN53_RS21725 (4527025) | 4527025..4529223 | + | 2199 | WP_001315935.1 | primosomal protein N' | - |
| LJN53_RS21730 (4529379) | 4529379..4530404 | + | 1026 | WP_000644904.1 | DNA-binding transcriptional regulator CytR | - |
| LJN53_RS21735 (4530496) | 4530496..4531455 | + | 960 | WP_000068834.1 | cell division protein FtsN | - |
| LJN53_RS21740 (4531548) | 4531548..4532078 | + | 531 | WP_000208242.1 | ATP-dependent protease subunit HslV | - |
| LJN53_RS21745 (4532088) | 4532088..4533419 | + | 1332 | WP_001293343.1 | ATP-dependent protease ATPase subunit HslU | VF |
| LJN53_RS21750 (4533486) | 4533486..4534412 | + | 927 | WP_001307494.1 | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | - |
| LJN53_RS21755 (4534505) | 4534505..4534990 | + | 486 | WP_000872908.1 | ribonuclease E activity regulator RraA | - |
| LJN53_RS21760 (4535075) | 4535075..4535320 | - | 246 | WP_001296623.1 | septal ring assembly protein ZapB | - |
| LJN53_RS21765 (4535746) | 4535746..4536591 | + | 846 | WP_000084268.1 | glycerol uptake facilitator protein GlpF | - |
| LJN53_RS21770 (4536614) | 4536614..4538122 | + | 1509 | WP_000136788.1 | glycerol kinase GlpK | - |
| LJN53_RS21775 (4538258) | 4538258..4539268 | + | 1011 | WP_001250644.1 | class II fructose-bisphosphatase | - |
| LJN53_RS21780 (4539365) | 4539365..4540111 | + | 747 | WP_000796320.1 | ferredoxin--NADP(+) reductase | - |
| LJN53_RS21785 (4540116) | 4540116..4540544 | - | 429 | WP_000323556.1 | universal stress protein UspD | - |
| LJN53_RS21790 (4540571) | 4540571..4540870 | - | 300 | WP_000655986.1 | DUF406 domain-containing protein | - |
| LJN53_RS21795 (4541082) | 4541082..4541522 | - | 441 | WP_000155272.1 | DUF805 domain-containing protein | - |
| LJN53_RS21800 (4541623) | 4541623..4542222 | + | 600 | WP_000802232.1 | YiiQ family protein | - |
| LJN53_RS21805 (4542330) | 4542330..4543097 | + | 768 | WP_001216325.1 | triose-phosphate isomerase | - |
| LJN53_RS21810 (4543152) | 4543152..4543907 | - | 756 | WP_000708998.1 | CDP-diacylglycerol diphosphatase | - |
| LJN53_RS21815 (4544014) | 4544014..4545003 | - | 990 | WP_001045689.1 | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | - |
| LJN53_RS21820 (4545347) | 4545347..4546327 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| LJN53_RS21825 (4546602) | 4546602..4547564 | - | 963 | WP_000591795.1 | 6-phosphofructokinase | - |
| LJN53_RS21830 (4547745) | 4547745..4548647 | - | 903 | WP_001076742.1 | CDF family cation-efflux transporter FieF | - |
| LJN53_RS21835 (4548796) | 4548796..4549296 | - | 501 | WP_001223800.1 | cell-envelope stress modulator CpxP | - |
| LJN53_RS21840 (4549446) | 4549446..4550144 | + | 699 | WP_001033722.1 | Regulator of RpoS | VF |
| LJN53_RS21845 (4550141) | 4550141..4551514 | + | 1374 | WP_000580417.1 | Adaptive-response sensory-kinase SasA | VF |
| LJN53_RS21850 (4551620) | 4551620..4552294 | - | 675 | WP_001270260.1 | 6-hydroxyaminopurine reductase | - |
| LJN53_RS21855 (4552443) | 4552443..4553426 | - | 984 | WP_001166063.1 | 2-keto-3-deoxygluconate transporter | - |
| LJN53_RS21860 (4553686) | 4553686..4554306 | - | 621 | WP_001297064.1 | hypothetical protein | VF |
| LJN53_RS21865 (4554591) | 4554591..4555625 | + | 1035 | WP_000063527.1 | L-rhamnose/proton symporter RhaT | - |
| LJN53_RS21870 (4555622) | 4555622..4556470 | - | 849 | WP_001309108.1 | HTH-type transcriptional activator RhaR | - |
| LJN53_RS21875 (4556544) | 4556544..4557380 | - | 837 | WP_000217162.1 | HTH-type transcriptional activator RhaS | - |
| LJN53_RS21880 (4557668) | 4557668..4559137 | + | 1470 | WP_000144050.1 | rhamnulokinase | - |
| LJN53_RS21885 (4559134) | 4559134..4560393 | + | 1260 | WP_000211486.1 | L-rhamnose isomerase | - |
| LJN53_RS21890 (4560635) | 4560635..4561459 | + | 825 | WP_001179764.1 | rhamnulose-1-phosphate aldolase | - |
| LJN53_RS21895 (4561469) | 4561469..4561783 | + | 315 | WP_000619503.1 | L-rhamnose mutarotase | - |
| LJN53_RS21900 (4562084) | 4562084..4562530 | + | 447 | WP_000729595.1 | PTS fructose transporter subunit IIA | - |
| LJN53_RS21905 (4562541) | 4562541..4563992 | + | 1452 | WP_000446010.1 | PTS fructose-like transporter subunit IIBC | - |
| LJN53_RS21910 (4563982) | 4563982..4565052 | + | 1071 | WP_063100036.1 | aminopeptidase | - |
| LJN53_RS21915 (4565052) | 4565052..4566800 | + | 1749 | WP_000931314.1 | putative frv operon regulatory protein | - |
| LJN53_RS21920 (4566850) | 4566850..4567890 | - | 1041 | WP_001317404.1 | YiiG family protein | - |
| LJN53_RS21925 (4568043) | 4568043..4568876 | - | 834 | WP_000753583.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| LJN53_RS21930 (4569070) | 4569070..4572120 | + | 3051 | WP_011310337.1 | formate dehydrogenase-N subunit alpha | - |
| LJN53_RS21935 (4572133) | 4572133..4573035 | + | 903 | WP_000331377.1 | formate dehydrogenase O subunit beta | - |
| LJN53_RS21940 (4573032) | 4573032..4573667 | + | 636 | WP_000829013.1 | formate dehydrogenase cytochrome b556 subunit | - |
| LJN53_RS21945 (4573664) | 4573664..4574593 | + | 930 | WP_000027708.1 | formate dehydrogenase accessory protein FdhE | - |
| LJN53_RS21950 (4574923) | 4574923..4575165 | - | 243 | WP_001087409.1 | protein YiiF | - |
| LJN53_RS21955 (4575385) | 4575385..4575603 | - | 219 | WP_001315930.1 | CopG family transcriptional regulator | - |
| LJN53_RS21960 (4576207) | 4576207..4576497 | - | 291 | WP_000356397.1 | NadS family protein | Antitoxin Detail |
| LJN53_RS21965 (4576498) | 4576498..4576809 | - | 312 | WP_000897305.1 | hypothetical protein | Toxin Detail |
| LJN53_RS21970 (4577038) | 4577038..4577946 | + | 909 | WP_001162704.1 | alpha/beta hydrolase | - |
| LJN53_RS21975 (4578010) | 4578010..4578951 | - | 942 | WP_001297068.1 | fatty acid biosynthesis protein FabY | - |
| LJN53_RS21980 (4578996) | 4578996..4579433 | - | 438 | WP_000560983.1 | D-aminoacyl-tRNA deacylase | - |
| LJN53_RS21985 (4579430) | 4579430..4580302 | - | 873 | WP_000920762.1 | virulence factor BrkB family protein | - |
| LJN53_RS21990 (4580296) | 4580296..4580895 | - | 600 | WP_001295269.1 | glucose-1-phosphatase | - |
| LJN53_RS21995 (4580994) | 4580994..4581779 | - | 786 | WP_000059678.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LJN53_RS22000 (4581813) | 4581813..4582709 | - | 897 | WP_000621656.1 | sulfofructose kinase | - |
| LJN53_RS22005 (4582877) | 4582877..4583773 | + | 897 | WP_000718896.1 | sulfolactaldehyde 3-reductase | - |
| LJN53_RS22010 (4583797) | 4583797..4584675 | + | 879 | WP_001046453.1 | sulfofructosephosphate aldolase | - |
| LJN53_RS22015 (4584692) | 4584692..4584961 | + | 270 | Protein_4294 | AGE family epimerase/isomerase | - |
| LJN53_RS22020 (4585014) | 4585014..4585718 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LJN53_RS22025 (4585782) | 4585782..4586777 | - | 996 | Protein_4296 | DUF3883 domain-containing protein | - |
| LJN53_RS22030 (4586828) | 4586828..4587055 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| LJN53_RS22035 (4587079) | 4587079..4587270 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| LJN53_RS22040 (4587752) | 4587752..4588294 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| LJN53_RS22045 (4588307) | 4588307..4589167 | - | 861 | WP_000557454.1 | hypothetical protein | ARG |
| LJN53_RS22050 (4589310) | 4589310..4589825 | + | 516 | Protein_4301 | IS4 family transposase IS10R | Transposase |
| LJN53_RS22055 (4589878) | 4589878..4590582 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LJN53_RS22060 (4590648) | 4590648..4591283 | + | 636 | Protein_4303 | replication protein C, IncQ-type | - |
| LJN53_RS22065 (4591332) | 4591332..4591787 | + | 456 | Protein_4304 | transposase | - |
| LJN53_RS22070 (4591818) | 4591818..4592702 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| LJN53_RS22075 (4592919) | 4592919..4594133 | + | 1215 | WP_023300759.1 | Multidrug resistance protein MdtL | ARG |
| LJN53_RS22080 (4594161) | 4594161..4594301 | + | 141 | Protein_4307 | LysR family transcriptional regulator | - |
| LJN53_RS22085 (4594537) | 4594537..4595241 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LJN53_RS22090 (4595307) | 4595307..4596284 | + | 978 | Protein_4309 | sulfoquinovose isomerase | - |
| LJN53_RS22095 (4596422) | 4596422..4597324 | + | 903 | WP_001315929.1 | aldose-1-epimerase | - |
| LJN53_RS22100 (4597523) | 4597523..4599559 | + | 2037 | WP_000380841.1 | sulfoquinovosidase | - |
| LJN53_RS22105 (4599605) | 4599605..4600990 | + | 1386 | WP_000018376.1 | MFS transporter | - |
| LJN53_RS22110 (4601033) | 4601033..4602436 | + | 1404 | WP_001297066.1 | MFS transporter | - |
| LJN53_RS22115 (4602504) | 4602504..4603196 | + | 693 | WP_000723474.1 | porin OmpL | - |
| LJN53_RS22120 (4603287) | 4603287..4604552 | - | 1266 | WP_000956312.1 | MFS transporter | - |
| LJN53_RS22125 (4604654) | 4604654..4605634 | - | 981 | WP_000256396.1 | TIM barrel protein | - |
| LJN53_RS22130 (4605642) | 4605642..4606352 | - | 711 | WP_000147430.1 | GntR family transcriptional regulator | - |
| LJN53_RS22135 (4606569) | 4606569..4608392 | - | 1824 | WP_000570668.1 | Elongation factor 4 | VF |
| LJN53_RS22140 (4608765) | 4608765..4610174 | + | 1410 | WP_001271717.1 | glutamate--ammonia ligase | - |
| LJN53_RS22145 (4610493) | 4610493..4611542 | + | 1050 | WP_000190577.1 | nitrogen regulation protein NR(II) | - |
| LJN53_RS22150 (4611554) | 4611554..4612963 | + | 1410 | WP_001188777.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| LJN53_RS22155 (4613075) | 4613075..4613185 | + | 111 | WP_000893994.1 | YshB family small membrane protein | - |
| LJN53_RS22160 (4613375) | 4613375..4614748 | - | 1374 | WP_000116090.1 | oxygen-independent coproporphyrinogen III oxidase | - |
| LJN53_RS22165 (4614937) | 4614937..4615446 | - | 510 | WP_001295266.1 | Der GTPase-activating protein YihI | - |
| LJN53_RS22170 (4615565) | 4615565..4615793 | - | 229 | Protein_4325 | hypothetical protein | - |
| LJN53_RS22175 (4616028) | 4616028..4616660 | + | 633 | WP_000183349.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| LJN53_RS22180 (4617042) | 4617042..4619828 | - | 2787 | WP_000250006.1 | DNA polymerase I | - |
| LJN53_RS22185 (4620192) | 4620192..4621124 | + | 933 | WP_001303740.1 | acyltransferase | - |
| LJN53_RS22190 (4621165) | 4621165..4622595 | - | 1431 | WP_001338628.1 | YdgA family protein | - |
| LJN53_RS22195 (4622750) | 4622750..4623376 | - | 627 | WP_000725337.1 | thiol:disulfide interchange protein DsbA | - |
| LJN53_RS22200 (4623393) | 4623393..4624379 | - | 987 | WP_001065519.1 | stress response kinase SrkA | - |
| LJN53_RS22205 (4624456) | 4624456..4624725 | - | 270 | WP_001295263.1 | YihD family protein | - |
| LJN53_RS22210 (4624795) | 4624795..4625379 | + | 585 | WP_001052174.1 | molybdenum cofactor guanylyltransferase MobA | - |
| LJN53_RS22215 (4625361) | 4625361..4625888 | + | 528 | WP_000907641.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|