MGE detailed information
MGE type: Genomic_island MGE length: 12700 bp
Accession: NZ_CP085622 Location: 3713475..3726174 Organism: Escherichia coli strain EC71 Replicon: chromosome
Accession: NZ_CP085622 Location: 3713475..3726174 Organism: Escherichia coli strain EC71 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJN53_RS17955 (3709055) | 3709055..3709507 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| LJN53_RS17960 (3709504) | 3709504..3710559 | - | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| LJN53_RS17965 (3710630) | 3710630..3711415 | - | 786 | WP_000207575.1 | putative lateral flagellar export/assembly protein LafU | - |
| LJN53_RS17970 (3711387) | 3711387..3713099 | + | 1713 | Protein_3512 | flagellar biosynthesis protein FlhA | - |
| LJN53_RS17975 (3713204) | 3713204..3713482 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LJN53_RS17980 (3713475) | 3713475..3713831 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LJN53_RS17985 (3713888) | 3713888..3714661 | - | 774 | WP_000543895.1 | hypothetical protein | VF |
| LJN53_RS17990 (3714847) | 3714847..3715107 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| LJN53_RS17995 (3715110) | 3715110..3715388 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| LJN53_RS18000 (3715544) | 3715544..3716284 | + | 741 | WP_063100007.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LJN53_RS18005 (3716255) | 3716255..3717022 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| LJN53_RS18010 (3717228) | 3717228..3717806 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| LJN53_RS18015 (3718046) | 3718046..3720490 | + | 2445 | WP_000973081.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| LJN53_RS18020 (3720533) | 3720533..3720979 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| LJN53_RS18025 (3721160) | 3721160..3721930 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| LJN53_RS18030 (3721972) | 3721972..3723108 | - | 1137 | Protein_3524 | ISAs1 family transposase ISEc1 | Transposase |
| LJN53_RS18035 (3723211) | 3723211..3724337 | - | 1127 | Protein_3525 | ISAs1 family transposase ISEc26 | Transposase |
| LJN53_RS18040 (3724418) | 3724418..3724603 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| LJN53_RS18045 (3724518) | 3724518..3724781 | - | 264 | WP_001513053.1 | hypothetical protein | - |
| LJN53_RS18050 (3724984) | 3724984..3728635 | - | 3652 | Protein_3528 | DUF6531 domain-containing protein | - |
| LJN53_RS18055 (3728711) | 3728711..3730037 | - | 1327 | Protein_3529 | type VI secretion system tip protein TssI/VgrG | - |
| LJN53_RS18060 (3730077) | 3730077..3730214 | - | 138 | WP_001297813.1 | hypothetical protein | - |
| LJN53_RS18065 (3730247) | 3730247..3730765 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|