MGE detailed information
MGE type: Genomic_island MGE length: 40210 bp
Accession: NZ_CP085619 Location: 4129906..4170115 Organism: Escherichia coli strain EC32 Replicon: chromosome
Accession: NZ_CP085619 Location: 4129906..4170115 Organism: Escherichia coli strain EC32 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJN50_RS20310 (4124942) | 4124942..4125946 | - | 1005 | WP_000471144.1 | GRP family sugar transporter | - |
| LJN50_RS20315 (4126050) | 4126050..4126691 | - | 642 | WP_000439686.1 | L-fuculose-phosphate aldolase | - |
| LJN50_RS20320 (4126722) | 4126722..4127837 | - | 1116 | WP_001022015.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| LJN50_RS20325 (4127847) | 4127847..4129106 | - | 1260 | WP_000132325.1 | S-methyl-5-thioribose kinase | - |
| LJN50_RS20330 (4129906) | 4129906..4130843 | + | 938 | Protein_3974 | glycosyltransferase | - |
| LJN50_RS20335 (4131264) | 4131264..4133339 | + | 2076 | WP_000366620.1 | AAA family ATPase | - |
| LJN50_RS20340 (4133332) | 4133332..4134618 | + | 1287 | WP_000504875.1 | McrC family protein | - |
| LJN50_RS20345 (4134728) | 4134728..4136467 | + | 1740 | WP_000781649.1 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| LJN50_RS20350 (4136480) | 4136480..4137670 | - | 1191 | WP_001295727.1 | DNA (cytosine-5-)-methyltransferase | - |
| LJN50_RS20355 (4137663) | 4137663..4139285 | - | 1623 | WP_001295726.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| LJN50_RS20360 (4140076) | 4140076..4140252 | - | 177 | Protein_3980 | IS3 family transposase ISSen1 | Transposase |
| LJN50_RS20365 (4140619) | 4140619..4140768 | - | 150 | Protein_3981 | hypothetical protein | - |
| LJN50_RS20370 (4140874) | 4140874..4141050 | - | 177 | WP_000839286.1 | DUF957 domain-containing protein | - |
| LJN50_RS20375 (4141067) | 4141067..4141555 | - | 489 | WP_000761690.1 | DUF5983 family protein | - |
| LJN50_RS20380 (4141552) | 4141552..4141929 | - | 378 | WP_000854770.1 | TA system toxin CbtA family protein | Toxin Detail |
| LJN50_RS20385 (4142018) | 4142018..4142386 | - | 369 | WP_001280950.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LJN50_RS20390 (4142549) | 4142549..4142770 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| LJN50_RS20395 (4142833) | 4142833..4143309 | - | 477 | WP_001186779.1 | RadC family protein | - |
| LJN50_RS20400 (4143325) | 4143325..4143789 | - | 465 | WP_000855061.1 | antirestriction protein | - |
| LJN50_RS20405 (4144131) | 4144131..4144949 | - | 819 | WP_001234712.1 | DUF932 domain-containing protein | - |
| LJN50_RS20410 (4145067) | 4145067..4145262 | - | 196 | Protein_3990 | DUF905 family protein | - |
| LJN50_RS20415 (4145333) | 4145333..4147234 | - | 1902 | Protein_3991 | Ag43/Cah family autotransporter adhesin | - |
| LJN50_RS20420 (4147428) | 4147428..4148969 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| LJN50_RS20425 (4148984) | 4148984..4149730 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| LJN50_RS20430 (4149815) | 4149815..4150765 | - | 951 | Protein_3994 | autotransporter adhesin family protein | - |
| LJN50_RS20435 (4151137) | 4151137..4152009 | - | 873 | WP_001069743.1 | GTPase family protein | - |
| LJN50_RS20440 (4152108) | 4152108..4152980 | - | 873 | WP_217823714.1 | hypothetical protein | - |
| LJN50_RS20445 (4154552) | 4154552..4154931 | - | 380 | Protein_3997 | IS21 family transposase ISEc62 | Transposase |
| LJN50_RS20450 (4155568) | 4155568..4156170 | - | 603 | WP_001387788.1 | hypothetical protein | - |
| LJN50_RS20455 (4156265) | 4156265..4156471 | - | 207 | WP_000211310.1 | AlpA family transcriptional regulator | - |
| LJN50_RS20460 (4157179) | 4157179..4157391 | + | 213 | WP_000453334.1 | hemolysin expression modulator Hha | - |
| LJN50_RS20465 (4157734) | 4157734..4157931 | - | 198 | WP_001545803.1 | hypothetical protein | - |
| LJN50_RS20470 (4158135) | 4158135..4158704 | + | 570 | WP_000148639.1 | inovirus Gp2 family protein | - |
| LJN50_RS20475 (4158964) | 4158964..4159365 | + | 402 | WP_000270971.1 | putative zinc ribbon protein | - |
| LJN50_RS20480 (4159353) | 4159353..4159787 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| LJN50_RS20485 (4160142) | 4160142..4160522 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| LJN50_RS20490 (4160519) | 4160519..4160866 | + | 348 | WP_000612632.1 | IS66 family transposase ISEc8 | Transposase |
| LJN50_RS20495 (4160906) | 4160906..4162300 | + | 1395 | WP_031935995.1 | IS66 family transposase ISEc8 | Transposase |
| LJN50_RS20500 (4162340) | 4162340..4162417 | + | 78 | Protein_4008 | DUF6404 family protein | - |
| LJN50_RS20505 (4162539) | 4162539..4163897 | - | 1359 | WP_000823249.1 | esterase-like activity of phytase family protein | - |
| LJN50_RS20510 (4164179) | 4164179..4164310 | + | 132 | Protein_4010 | IS3 family transposase | - |
| LJN50_RS20515 (4164834) | 4164834..4165060 | + | 227 | Protein_4011 | acetolactate synthase small subunit | - |
| LJN50_RS20520 (4165062) | 4165062..4165844 | - | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| LJN50_RS20525 (4166150) | 4166150..4167070 | + | 921 | WP_000350265.1 | ribokinase | - |
| LJN50_RS20530 (4167098) | 4167098..4168414 | + | 1317 | WP_000998350.1 | L-fucose:H+ symporter permease | - |
| LJN50_RS20535 (4168426) | 4168426..4169439 | + | 1014 | WP_000107474.1 | aldose 1-epimerase family protein | - |
| LJN50_RS20540 (4169861) | 4169861..4170115 | + | 255 | WP_001327567.1 | IS66 family transposase IS682 | Transposase |
| LJN50_RS20545 (4170362) | 4170362..4171618 | - | 1257 | WP_000345347.1 | PTS ascorbate transporter subunit IIC | - |
| LJN50_RS20550 (4171631) | 4171631..4171918 | - | 288 | WP_000705930.1 | PTS sugar transporter subunit IIB | - |
| LJN50_RS20555 (4171934) | 4171934..4172377 | - | 444 | WP_000916805.1 | PTS sugar transporter subunit IIA | - |
| LJN50_RS20560 (4172648) | 4172648..4173679 | + | 1032 | WP_000416151.1 | LacI family DNA-binding transcriptional regulator | - |
| LJN50_RS20565 (4173807) | 4173807..4174361 | + | 555 | Protein_4021 | transposase | - |
| LJN50_RS20570 (4174380) | 4174380..4174875 | - | 496 | Protein_4022 | IS630 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|