MGE detailed information
MGE type: IS/Tn MGE length: 228 bp
Accession: NZ_CP085527 Location: 1144114..1144341 Organism: Sinorhizobium meliloti strain L6-AK89 Replicon: plasmid pSymA
Accession: NZ_CP085527 Location: 1144114..1144341 Organism: Sinorhizobium meliloti strain L6-AK89 Replicon: plasmid pSymA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LJD24_RS24430 (LJD24_24430) | 1139511..1139900 | - | 390 | WP_017269045.1 | very short patch repair endonuclease | - |
LJD24_RS24435 (LJD24_24435) | 1140113..1141183 | + | 1071 | WP_017269044.1 | DUF262 domain-containing protein | - |
LJD24_RS24440 (LJD24_24440) | 1141173..1141838 | + | 666 | WP_017269043.1 | MAE_28990/MAE_18760 family HEPN-like nuclease | - |
LJD24_RS24445 (LJD24_24445) | 1141826..1142995 | - | 1170 | WP_162145862.1 | DNA cytosine methyltransferase | - |
LJD24_RS24450 (LJD24_24450) | 1143466..1143708 | + | 243 | WP_013845224.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
LJD24_RS24455 (LJD24_24455) | 1143705..1144124 | + | 420 | WP_013845223.1 | type II toxin-antitoxin system VapC family toxin | - |
LJD24_RS24460 (LJD24_24460) | 1144132..1144341 | + | 210 | Protein_1123 | IS256 family transposase ISAli6 | Transposase |
LJD24_RS24465 (LJD24_24465) | 1144496..1144756 | + | 261 | WP_013845222.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
LJD24_RS24470 (LJD24_24470) | 1144756..1145031 | + | 276 | WP_014989489.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LJD24_RS24475 (LJD24_24475) | 1145080..1146234 | + | 1155 | WP_017271252.1 | site-specific integrase | - |
LJD24_RS24480 (LJD24_24480) | 1146283..1146582 | - | 300 | WP_017271251.1 | hypothetical protein | - |
LJD24_RS24485 (LJD24_24485) | 1147085..1147522 | - | 438 | WP_013845218.1 | VOC family protein | - |
LJD24_RS24490 (LJD24_24490) | 1148159..1148540 | + | 382 | Protein_1129 | integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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