MGE detailed information
MGE type: Genomic_island MGE length: 12700 bp
Accession: NZ_CP085488 Location: 3638153..3650852 Organism: Escherichia coli strain VCSW8 Replicon: chromosome
Accession: NZ_CP085488 Location: 3638153..3650852 Organism: Escherichia coli strain VCSW8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJY68_RS17495 (3633515) | 3633515..3633787 | + | 273 | WP_001341234.1 | flagellar biosynthetic protein FliQ | - |
| LJY68_RS17500 (3633789) | 3633789..3634571 | + | 783 | WP_001260503.1 | flagellar biosynthetic protein FliR | - |
| LJY68_RS17505 (3634561) | 3634561..3635700 | + | 1140 | WP_032216948.1 | flagellar type III secretion system protein FlhB | - |
| LJY68_RS17510 (3635684) | 3635684..3637777 | + | 2094 | WP_001140806.1 | flagellar biosynthesis protein FlhA | - |
| LJY68_RS17515 (3637882) | 3637882..3638160 | + | 279 | WP_042099148.1 | type II toxin-antitoxin system HicA family toxin | - |
| LJY68_RS17520 (3638153) | 3638153..3638509 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LJY68_RS17525 (3638566) | 3638566..3639339 | - | 774 | WP_000543899.1 | Murein DD-endopeptidase MepH | VF |
| LJY68_RS17530 (3639525) | 3639525..3639785 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| LJY68_RS17535 (3639788) | 3639788..3640066 | + | 279 | WP_000615982.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| LJY68_RS17540 (3640222) | 3640222..3640962 | + | 741 | WP_227534316.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LJY68_RS17545 (3640933) | 3640933..3641700 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| LJY68_RS17550 (3641906) | 3641906..3642484 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| LJY68_RS17555 (3642724) | 3642724..3645168 | + | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| LJY68_RS17560 (3645211) | 3645211..3645657 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| LJY68_RS17565 (3645838) | 3645838..3646608 | + | 771 | WP_001118029.1 | 2-oxoglutaramate amidase | - |
| LJY68_RS17570 (3646650) | 3646650..3647786 | - | 1137 | Protein_3433 | ISAs1 family transposase ISEc1 | Transposase |
| LJY68_RS17575 (3647889) | 3647889..3649015 | - | 1127 | Protein_3434 | ISAs1 family transposase ISEc26 | Transposase |
| LJY68_RS17580 (3649096) | 3649096..3649281 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| LJY68_RS17585 (3649196) | 3649196..3649459 | - | 264 | WP_001513053.1 | hypothetical protein | - |
| LJY68_RS17590 (3650112) | 3650112..3651026 | - | 915 | Protein_3437 | Protein RhsD | VF |
| LJY68_RS17595 (3651062) | 3651062..3653289 | - | 2228 | Protein_3438 | DUF6531 domain-containing protein | - |
| LJY68_RS17600 (3653401) | 3653401..3655542 | - | 2142 | WP_000103361.1 | type VI secretion system tip protein VgrG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|