MGE detailed information
MGE type: Prophage MGE length: 62994 bp
Accession: NZ_CP085202 Location: 2383664..2446657 Organism: Shigella flexneri strain P099 Replicon: chromosome
Accession: NZ_CP085202 Location: 2383664..2446657 Organism: Shigella flexneri strain P099 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUX27_RS24920 () | 2379737..2379895 | - | 159 | WP_001327808.1 | protein YoaL | - |
| IUX27_RS11825 () | 2380212..2381183 | + | 972 | WP_000150543.1 | PTS mannose transporter subunit IIAB | - |
| IUX27_RS11830 () | 2381246..2382046 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| IUX27_RS11835 () | 2382059..2382910 | + | 852 | WP_001331209.1 | PTS mannose transporter subunit IID | - |
| IUX27_RS11840 () | 2382965..2383441 | + | 477 | WP_000156246.1 | DUF986 family protein | - |
| IUX27_RS11845 () | 2383470..2384167 | + | 698 | WP_227804321.1 | IS1 family transposase IS1X2 | Transposase |
| IUX27_RS11850 () | 2384630..2385196 | + | 567 | WP_001668667.1 | manganese efflux pump MntP | - |
| IUX27_RS11855 () | 2385193..2386002 | - | 810 | WP_000010128.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| IUX27_RS11860 () | 2386168..2386377 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| IUX27_RS11865 () | 2386390..2386533 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| IUX27_RS11870 () | 2387204..2387491 | - | 288 | WP_001006860.1 | YebO family protein | - |
| IUX27_RS11875 () | 2387566..2387709 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| IUX27_RS11880 () | 2387868..2388107 | + | 240 | WP_001211010.1 | YobH family protein | - |
| IUX27_RS11885 () | 2388250..2389041 | - | 792 | WP_001262181.1 | DNA-binding transcriptional regulator KdgR | - |
| IUX27_RS11890 () | 2389218..2390591 | + | 1374 | WP_001127218.1 | MFS transporter | - |
| IUX27_RS11895 () | 2390637..2391518 | - | 882 | WP_000984517.1 | protease HtpX | - |
| IUX27_RS11900 () | 2391710..2393758 | - | 2049 | WP_001055799.1 | carboxy terminal-processing peptidase | - |
| IUX27_RS11905 () | 2393778..2394476 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| IUX27_RS11910 () | 2394573..2395070 | - | 498 | WP_001043881.1 | L-methionine (R)-S-oxide reductase | - |
| IUX27_RS11915 () | 2395200..2396483 | + | 1284 | WP_001207280.1 | membrane integrity lipid transport subunit YebS | - |
| IUX27_RS11920 () | 2396452..2399072 | + | 2621 | Protein_2309 | hypothetical protein | VF |
| IUX27_RS11925 () | 2399152..2400591 | + | 1440 | Protein_2310 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| IUX27_RS11930 () | 2400709..2400945 | + | 237 | WP_001295499.1 | YebV family protein | - |
| IUX27_RS11935 () | 2401050..2401241 | + | 192 | WP_005049838.1 | YebW family protein | - |
| IUX27_RS11940 () | 2401266..2401454 | - | 189 | Protein_2313 | serine/threonine-protein phosphatase | - |
| IUX27_RS11950 () | 2402719..2403165 | - | 447 | Protein_2315 | metallophosphoesterase | - |
| IUX27_RS11960 () | 2404693..2406399 | + | 1707 | WP_000936833.1 | hypothetical protein | VF |
| IUX27_RS11970 () | 2406579..2407202 | - | 624 | WP_064198857.1 | DUF4376 domain-containing protein | - |
| IUX27_RS11975 () | 2407153..2407320 | - | 168 | Protein_2319 | IS66 family transposase ISSfl3 | Transposase |
| IUX27_RS11980 () | 2407322..2407702 | - | 381 | Protein_2320 | IS66 family transposase ISSfl3 | Transposase |
| IUX27_RS11985 () | 2408926..2409814 | + | 889 | Protein_2321 | Rha family transcriptional regulator | - |
| IUX27_RS11990 () | 2409811..2411084 | + | 1274 | WP_248500996.1 | IS3 family transposase IS2 | Transposase |
| IUX27_RS11995 () | 2411161..2411382 | + | 222 | WP_000560226.1 | killing protein KilR | - |
| IUX27_RS12000 () | 2411382..2411552 | + | 171 | WP_001359121.1 | YdaE family protein | - |
| IUX27_RS12005 () | 2411627..2411902 | + | 276 | WP_005049830.1 | hypothetical protein | - |
| IUX27_RS12010 () | 2412002..2413417 | + | 1416 | Protein_2326 | exodeoxyribonuclease VIII | - |
| IUX27_RS12020 () | 2414729..2414989 | + | 261 | WP_171763949.1 | host-nuclease inhibitor Gam family protein | - |
| IUX27_RS12025 () | 2414995..2416101 | + | 1107 | WP_112333954.1 | AAA family ATPase | - |
| IUX27_RS12035 () | 2417419..2418628 | + | 1210 | Protein_2331 | IS3 family transposase IS629 | Transposase |
| IUX27_RS12040 () | 2418676..2418843 | + | 168 | WP_005049823.1 | excisionase family protein | - |
| IUX27_RS12045 () | 2418845..2419015 | + | 171 | Protein_2333 | DUF3596 domain-containing protein | - |
| IUX27_RS12055 () | 2419783..2420424 | + | 642 | Protein_2335 | hypothetical protein ; Integrase | Integrase |
| IUX27_RS12060 () | 2420856..2421770 | + | 915 | WP_000555620.1 | hypothetical protein | VF |
| IUX27_RS12065 () | 2421770..2422597 | + | 828 | WP_000983722.1 | hypothetical protein | VF |
| IUX27_RS12070 () | 2422594..2423451 | + | 858 | WP_001101728.1 | hypothetical protein | ARG |
| IUX27_RS12075 () | 2423448..2424305 | + | 858 | WP_000968134.1 | hypothetical protein | ARG |
| IUX27_RS12080 () | 2424506..2425129 | - | 624 | WP_000930141.1 | DUF4376 domain-containing protein | - |
| IUX27_RS12085 () | 2425080..2426344 | - | 1265 | Protein_2341 | prophage tail fiber N-terminal domain-containing protein | - |
| IUX27_RS12090 () | 2426368..2426912 | - | 545 | Protein_2342 | tail fiber assembly protein | - |
| IUX27_RS12095 () | 2426936..2427304 | - | 369 | WP_011069357.1 | hypothetical protein | - |
| IUX27_RS12100 () | 2427332..2428237 | - | 906 | Protein_2344 | IS3 family transposase ISSd1 | Transposase |
| IUX27_RS12110 () | 2429009..2429161 | - | 153 | Protein_2346 | Rha family transcriptional regulator | - |
| IUX27_RS12120 () | 2431403..2433007 | - | 1605 | Protein_2348 | site-specific integrase | - |
| IUX27_RS12145 () | 2433641..2434201 | - | 561 | WP_072075205.1 | ORF6N domain-containing protein | - |
| IUX27_RS12155 () | 2435412..2435585 | - | 174 | WP_000504450.1 | hypothetical protein | - |
| IUX27_RS12160 () | 2435738..2436292 | - | 555 | WP_000640143.1 | DUF1133 family protein | - |
| IUX27_RS12165 () | 2436289..2436579 | - | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| IUX27_RS12170 () | 2436579..2437178 | - | 600 | WP_000940329.1 | DUF1367 family protein | - |
| IUX27_RS12175 () | 2437312..2438009 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| IUX27_RS12180 () | 2438515..2438670 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2438682..2438740 | + | 59 | - | - | Antitoxin Detail |
| IUX27_RS12185 () | 2439125..2439490 | - | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| IUX27_RS12190 () | 2439490..2440155 | - | 666 | WP_000208062.1 | hypothetical protein | - |
| IUX27_RS12195 () | 2440152..2440517 | - | 366 | WP_001229297.1 | HNH endonuclease signature motif containing protein | - |
| IUX27_RS12200 () | 2440519..2440737 | - | 219 | WP_000256998.1 | DUF4014 family protein | - |
| IUX27_RS12205 () | 2440830..2441186 | - | 357 | WP_005048249.1 | hypothetical protein | - |
| IUX27_RS12210 () | 2441244..2441666 | - | 423 | WP_001118167.1 | DUF977 family protein | - |
| IUX27_RS12215 () | 2441681..2442427 | - | 747 | WP_000788996.1 | ATP-binding protein | - |
| IUX27_RS12220 () | 2442573..2442742 | - | 170 | Protein_2364 | hypothetical protein | - |
| IUX27_RS12225 () | 2443221..2444494 | + | 1274 | WP_141106122.1 | IS3 family transposase IS2 | Transposase |
| IUX27_RS12230 () | 2444508..2444918 | - | 411 | Protein_2366 | YdaU family protein | - |
| IUX27_RS12235 () | 2445022..2446178 | + | 1157 | WP_094081493.1 | IS3 family transposase IS600 | Transposase |
| IUX27_RS12240 () | 2446223..2446657 | - | 435 | Protein_2368 | hypothetical protein | VF |
| IUX27_RS12245 () | 2446795..2447715 | + | 921 | WP_000981715.1 | alpha/beta hydrolase | - |
| IUX27_RS12250 () | 2447715..2448074 | + | 360 | Protein_2370 | alpha/beta hydrolase | - |
| IUX27_RS12255 () | 2448091..2449287 | - | 1197 | WP_038404179.1 | IS110-like element ISSfl4 family transposase | - |
| IUX27_RS12260 () | 2449516..2450097 | + | 582 | Protein_2372 | alpha/beta hydrolase | - |
| IUX27_RS12265 () | 2450115..2450753 | + | 639 | WP_005049763.1 | SDR family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|