MGE detailed information
MGE type: Genomic_island MGE length: 55967 bp
Accession: NZ_CP085188 Location: 2879216..2935182 Organism: Escherichia coli strain EC195 Replicon: chromosome
Accession: NZ_CP085188 Location: 2879216..2935182 Organism: Escherichia coli strain EC195 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIN52_RS13980 (2874681) | 2874681..2875838 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| LIN52_RS13985 (2875846) | 2875846..2877327 | - | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| LIN52_RS13990 (2877269) | 2877269..2877802 | - | 534 | WP_000857399.1 | O-acetyl-ADP-ribose deacetylase | - |
| LIN52_RS13995 (2877897) | 2877897..2878208 | - | 312 | WP_060621315.1 | protein YmdA | - |
| LIN52_RS14000 (2878329) | 2878329..2878661 | - | 333 | WP_000992831.1 | curli assembly chaperone CsgC | - |
| LIN52_RS14005 (2878720) | 2878720..2879175 | - | 456 | WP_000771437.1 | curli major subunit CsgA | - |
| LIN52_RS14010 (2879216) | 2879216..2879671 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| LIN52_RS14015 (2880425) | 2880425..2881075 | + | 651 | WP_001678504.1 | CsgBAC operon transcriptional regulatory protein | VF |
| LIN52_RS14020 (2881080) | 2881080..2881469 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| LIN52_RS14025 (2881494) | 2881494..2881910 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| LIN52_RS14030 (2881937) | 2881937..2882770 | + | 834 | WP_001372924.1 | Curli production assembly/transport component CsgG | VF |
| LIN52_RS14035 (2882834) | 2882834..2883325 | - | 492 | WP_001297187.1 | DUF1097 domain-containing protein | - |
| LIN52_RS14040 (2883427) | 2883427..2883981 | - | 555 | WP_001001902.1 | molecular chaperone YcdY | - |
| LIN52_RS14045 (2884005) | 2884005..2884742 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| LIN52_RS14050 (2884797) | 2884797..2885735 | - | 939 | WP_000351311.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| LIN52_RS14060 (2886206) | 2886206..2887047 | - | 842 | Protein_2754 | DUF4942 domain-containing protein | - |
| LIN52_RS14065 (2887132) | 2887132..2887329 | - | 198 | WP_000839253.1 | DUF957 domain-containing protein | - |
| LIN52_RS14070 (2887346) | 2887346..2887834 | - | 489 | WP_032180032.1 | DUF5983 family protein | - |
| LIN52_RS14075 (2887831) | 2887831..2888214 | - | 384 | WP_000854686.1 | TA system toxin CbtA family protein | Toxin Detail |
| LIN52_RS14080 (2888295) | 2888295..2888675 | - | 381 | WP_001285602.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LIN52_RS14085 (2888686) | 2888686..2889369 | - | 684 | WP_000086768.1 | hypothetical protein | - |
| LIN52_RS14090 (2889388) | 2889388..2889609 | - | 222 | WP_000692298.1 | DUF987 domain-containing protein | - |
| LIN52_RS14095 (2889672) | 2889672..2890148 | - | 477 | WP_001186726.1 | RadC family protein | - |
| LIN52_RS14100 (2890164) | 2890164..2890649 | - | 486 | WP_000214307.1 | antirestriction protein | - |
| LIN52_RS14105 (2890741) | 2890741..2891562 | - | 822 | WP_001761104.1 | DUF932 domain-containing protein | - |
| LIN52_RS14110 (2891663) | 2891663..2891871 | - | 209 | Protein_2764 | DUF905 domain-containing protein | - |
| LIN52_RS14115 (2891972) | 2891972..2892427 | - | 456 | WP_000581506.1 | IrmA family protein | - |
| LIN52_RS14120 (2892503) | 2892503..2895019 | - | 2517 | WP_001531238.1 | hypothetical protein | - |
| LIN52_RS14125 (2895140) | 2895140..2897986 | - | 2847 | WP_122639720.1 | Ag43/Cah family autotransporter adhesin | - |
| LIN52_RS14130 (2898358) | 2898358..2899230 | - | 873 | WP_001069760.1 | GTPase family protein | - |
| LIN52_RS14135 (2899598) | 2899598..2900293 | - | 696 | WP_032180028.1 | hypothetical protein | - |
| LIN52_RS14140 (2900296) | 2900296..2900802 | - | 507 | WP_032180027.1 | hypothetical protein | - |
| LIN52_RS14145 (2900799) | 2900799..2901629 | - | 831 | WP_001399639.1 | Sporulation initiation inhibitor protein Soj | VF |
| LIN52_RS14150 (2902951) | 2902951..2903190 | + | 240 | WP_024224214.1 | hypothetical protein | - |
| LIN52_RS14155 (2903230) | 2903230..2905668 | + | 2439 | WP_032180025.1 | type I restriction-modification system subunit M | - |
| LIN52_RS14160 (2905668) | 2905668..2907023 | + | 1356 | WP_223349791.1 | restriction endonuclease subunit S | - |
| LIN52_RS14165 (2907036) | 2907036..2907692 | + | 657 | WP_000312833.1 | toxin-antitoxin system toxin DNA ADP-ribosyl transferase DarT | Toxin Detail |
| LIN52_RS14170 (2907689) | 2907689..2908756 | + | 1068 | WP_000634203.1 | toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG | Antitoxin Detail |
| LIN52_RS14175 (2908775) | 2908775..2911870 | + | 3096 | WP_000108736.1 | HsdR family type I site-specific deoxyribonuclease | - |
| LIN52_RS14180 (2911870) | 2911870..2912586 | + | 717 | WP_001122107.1 | SprT family zinc-dependent metalloprotease | - |
| LIN52_RS14185 (2912931) | 2912931..2913545 | + | 615 | Protein_2779 | IS3 family transposase ISSd1 | Transposase |
| LIN52_RS14190 (2913789) | 2913789..2915087 | - | 1299 | WP_000262203.1 | anaerobic C4-dicarboxylate transporter | - |
| LIN52_RS14195 (2915153) | 2915153..2915872 | - | 720 | WP_000677245.1 | amino acid racemase | - |
| LIN52_RS14200 (2916223) | 2916223..2917161 | + | 939 | WP_000789104.1 | HTH-type transcriptional regulator YjiE | VF |
| LIN52_RS14205 (2917279) | 2917279..2917737 | - | 459 | WP_021513032.1 | IS200-IS605 family transposase IS200C | Transposase |
| LIN52_RS14210 (2917817) | 2917817..2918308 | + | 492 | Protein_2784 | putative protein YggR | VF |
| LIN52_RS14220 (2918466) | 2918466..2919611 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| LIN52_RS14225 (2919935) | 2919935..2921197 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| LIN52_RS14230 (2921463) | 2921463..2922809 | - | 1347 | WP_000483766.1 | IS4 family transposase IS4 | Transposase |
| LIN52_RS14235 (2923288) | 2923288..2923443 | - | 156 | Protein_2788 | tellurite resistance protein | - |
| LIN52_RS14240 (2923585) | 2923585..2924367 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| LIN52_RS14245 (2924364) | 2924364..2925386 | - | 1023 | Protein_2790 | IS21 family transposase IS100kyp | Transposase |
| LIN52_RS14250 (2925749) | 2925749..2926006 | - | 258 | Protein_2791 | replication endonuclease | - |
| LIN52_RS14255 (2926097) | 2926097..2927635 | - | 1539 | WP_060621365.1 | IS66 family transposase ISEc8 | Transposase |
| LIN52_RS14260 (2927685) | 2927685..2928032 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| LIN52_RS14265 (2928029) | 2928029..2928409 | - | 381 | WP_021566758.1 | IS66 family transposase ISEc8 | Transposase |
| LIN52_RS14270 (2928622) | 2928622..2928732 | + | 111 | Protein_2795 | transposase domain-containing protein | - |
| LIN52_RS14275 (2928864) | 2928864..2929877 | - | 1014 | WP_000107485.1 | aldose 1-epimerase family protein | - |
| LIN52_RS14280 (2929889) | 2929889..2931205 | - | 1317 | WP_000998346.1 | L-fucose:H+ symporter permease | - |
| LIN52_RS14285 (2931233) | 2931233..2932153 | - | 921 | WP_000350265.1 | ribokinase | - |
| LIN52_RS14290 (2932459) | 2932459..2933241 | + | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| LIN52_RS14295 (2933243) | 2933243..2933469 | - | 227 | Protein_2800 | acetolactate synthase small subunit | - |
| LIN52_RS14305 (2935485) | 2935485..2935622 | - | 138 | WP_154761740.1 | hypothetical protein | - |
| LIN52_RS14310 (2935772) | 2935772..2936939 | + | 1168 | Protein_2803 | UxaA family hydrolase | - |
| LIN52_RS14315 (2937002) | 2937002..2937826 | - | 825 | WP_000072197.1 | aga operon transcriptional regulator AgaR | - |
| LIN52_RS25695 (2938075) | 2938075..2938149 | + | 75 | Protein_2805 | aldolase | - |
| LIN52_RS14320 (2938156) | 2938156..2938413 | + | 258 | Protein_2806 | class II fructose-bisphosphate aldolase | - |
| LIN52_RS14325 (2938527) | 2938527..2940098 | + | 1572 | WP_000192271.1 | maltose/glucose-specific PTS transporter subunit IIBC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|