MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63359 bp
Accession: NZ_CP085185 Location: 1..63359 Organism: Escherichia coli strain EC7518 Replicon: plasmid pEC7518-63k
Accession: NZ_CP085185 Location: 1..63359 Organism: Escherichia coli strain EC7518 Replicon: plasmid pEC7518-63k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIN51_RS24575 (LIN51_24575) | 1..1029 | + | 1029 | WP_001175213.1 | plasmid replication initiator RepA | - |
| LIN51_RS24580 (LIN51_24580) | 1730..1920 | + | 191 | Protein_1 | hypothetical protein | - |
| LIN51_RS24585 (LIN51_24585) | 2570..2722 | + | 153 | Protein_2 | FlmC family protein | - |
| LIN51_RS24590 (LIN51_24590) | 2670..2789 | + | 120 | WP_228932012.1 | Hok/Gef family protein | - |
| LIN51_RS24595 (LIN51_24595) | 2939..3535 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| LIN51_RS24600 (LIN51_24600) | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| LIN51_RS24605 (LIN51_24605) | 3911..4576 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| LIN51_RS24610 (LIN51_24610) | 5174..5503 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| LIN51_RS24615 (LIN51_24615) | 6085..6408 | + | 324 | WP_000427403.1 | hypothetical protein | - |
| LIN51_RS24620 (LIN51_24620) | 6450..6659 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| LIN51_RS24625 (LIN51_24625) | 6756..6980 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| LIN51_RS24630 (LIN51_24630) | 7032..7292 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| LIN51_RS24635 (LIN51_24635) | 7282..7533 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| LIN51_RS24640 (LIN51_24640) | 8083..8361 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| LIN51_RS24645 (LIN51_24645) | 8781..9047 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LIN51_RS24650 (LIN51_24650) | 9154..9597 | - | 444 | WP_000068545.1 | hypothetical protein | - |
| LIN51_RS24655 (LIN51_24655) | 9894..10076 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| LIN51_RS24660 (LIN51_24660) | 10101..10538 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LIN51_RS24665 (LIN51_24665) | 10669..10995 | - | 327 | WP_063078684.1 | hypothetical protein | - |
| LIN51_RS24670 (LIN51_24670) | 11015..11722 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| LIN51_RS24675 (LIN51_24675) | 11724..12476 | - | 753 | WP_063078685.1 | conjugal transfer protein TraL | - |
| LIN51_RS24680 (LIN51_24680) | 12494..12895 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| LIN51_RS24685 (LIN51_24685) | 13263..13604 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| LIN51_RS24690 (LIN51_24690) | 13601..17914 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| LIN51_RS24695 (LIN51_24695) | 18135..19760 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| LIN51_RS24700 (LIN51_24700) | 19832..20605 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| LIN51_RS24705 (LIN51_24705) | 20564..21004 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| LIN51_RS24710 (LIN51_24710) | 21350..21556 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| LIN51_RS24715 (LIN51_24715) | 21676..22889 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| LIN51_RS24720 (LIN51_24720) | 22938..24062 | - | 1125 | Protein_29 | DNA topoisomerase | - |
| LIN51_RS24730 (LIN51_24730) | 25373..26416 | - | 1044 | Protein_31 | DNA topoisomerase | - |
| LIN51_RS24735 (LIN51_24735) | 26421..26996 | - | 576 | WP_227311783.1 | DNA topoisomerase III | - |
| LIN51_RS24740 (LIN51_24740) | 27166..28842 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| LIN51_RS24745 (LIN51_24745) | 28937..29469 | - | 533 | Protein_34 | thermonuclease family protein | - |
| LIN51_RS24750 (LIN51_24750) | 29499..30152 | - | 654 | WP_170852113.1 | hypothetical protein | - |
| LIN51_RS24755 (LIN51_24755) | 30164..31288 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| LIN51_RS24760 (LIN51_24760) | 31327..31581 | + | 255 | WP_224519887.1 | pilus assembly protein PilV | - |
| LIN51_RS24765 (LIN51_24765) | 32468..32728 | + | 261 | WP_029237379.1 | hypothetical protein | - |
| LIN51_RS24770 (LIN51_24770) | 32707..34023 | - | 1317 | WP_021500066.1 | hypothetical protein | VF |
| LIN51_RS24775 (LIN51_24775) | 34036..34671 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LIN51_RS24780 (LIN51_24780) | 34675..35157 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| LIN51_RS24785 (LIN51_24785) | 35223..35780 | - | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| LIN51_RS24790 (LIN51_24790) | 35825..36934 | - | 1110 | WP_227311778.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LIN51_RS24795 (LIN51_24795) | 36925..38463 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| LIN51_RS24800 (LIN51_24800) | 38488..38982 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| LIN51_RS24805 (LIN51_24805) | 38966..40276 | - | 1311 | WP_227311779.1 | type 4b pilus protein PilO2 | - |
| LIN51_RS24810 (LIN51_24810) | 40327..41970 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| LIN51_RS24815 (LIN51_24815) | 41963..42499 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| LIN51_RS24820 (LIN51_24820) | 42546..44504 | - | 1959 | WP_227311780.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LIN51_RS24825 (LIN51_24825) | 44520..45575 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| LIN51_RS24830 (LIN51_24830) | 45594..46733 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| LIN51_RS24835 (LIN51_24835) | 46723..47493 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| LIN51_RS24840 (LIN51_24840) | 47490..48224 | - | 735 | WP_227311781.1 | Type IV secretion system protein virB8 | VF |
| LIN51_RS24845 (LIN51_24845) | 48224..48358 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| LIN51_RS24850 (LIN51_24850) | 48390..50747 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| LIN51_RS24855 (LIN51_24855) | 50753..51073 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| LIN51_RS24860 (LIN51_24860) | 51144..51434 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| LIN51_RS24865 (LIN51_24865) | 51434..52018 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| LIN51_RS24870 (LIN51_24870) | 52039..52437 | - | 399 | WP_072643816.1 | hypothetical protein | - |
| LIN51_RS24875 (LIN51_24875) | 52556..52993 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| LIN51_RS24880 (LIN51_24880) | 52999..54234 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| LIN51_RS24885 (LIN51_24885) | 54237..54536 | - | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LIN51_RS24890 (LIN51_24890) | 54604..54885 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LIN51_RS24895 (LIN51_24895) | 54875..55126 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| LIN51_RS24900 (LIN51_24900) | 55226..55861 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| LIN51_RS24905 (LIN51_24905) | 55934..56221 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| LIN51_RS24910 (LIN51_24910) | 56234..56488 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| LIN51_RS24915 (LIN51_24915) | 56490..57131 | - | 642 | WP_227311782.1 | hypothetical protein | VF |
| LIN51_RS24920 (LIN51_24920) | 57137..58132 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| LIN51_RS24925 (LIN51_24925) | 58136..58393 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| LIN51_RS24930 (LIN51_24930) | 58390..58692 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| LIN51_RS24935 (LIN51_24935) | 58673..58930 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| LIN51_RS24940 (LIN51_24940) | 58963..59409 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| LIN51_RS24945 (LIN51_24945) | 59420..59590 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| LIN51_RS24950 (LIN51_24950) | 59594..60037 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| LIN51_RS24955 (LIN51_24955) | 60411..61364 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| LIN51_RS24960 (LIN51_24960) | 61391..61567 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| LIN51_RS24965 (LIN51_24965) | 61560..61775 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| LIN51_RS24970 (LIN51_24970) | 61768..62220 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|