MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 53197 bp
Accession: NZ_CP085087 Location: 743905..797101 Organism: Streptococcus suis strain Ssuis_MA2 Replicon: chromosome
Accession: NZ_CP085087 Location: 743905..797101 Organism: Streptococcus suis strain Ssuis_MA2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIO32_RS03800 | 739276..739965 | + | 690 | WP_013730276.1 | Wzz/FepE/Etk N-terminal domain-containing protein | - |
| LIO32_RS03805 | 739975..740661 | + | 687 | WP_013730277.1 | tyrosine-protein kinase | - |
| LIO32_RS03810 | 740700..741431 | + | 732 | WP_013730278.1 | capsular polysaccharide biosynthesis protein Cps4B | - |
| LIO32_RS03815 | 741461..743286 | + | 1826 | Protein_717 | polysaccharide biosynthesis protein | - |
| LIO32_RS03820 | 743731..744429 | + | 699 | WP_014636873.1 | sugar transferase | - |
| LIO32_RS03825 | 744439..745659 | + | 1221 | WP_024390820.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| LIO32_RS03830 | 745652..746482 | + | 831 | WP_024390819.1 | UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase | VF |
| LIO32_RS03835 | 746559..747452 | + | 894 | WP_024390818.1 | beta-1,6-N-acetylglucosaminyltransferase | - |
| LIO32_RS03840 | 747457..748047 | + | 591 | WP_024390817.1 | GNAT family N-acetyltransferase | - |
| LIO32_RS03845 | 748044..749201 | + | 1158 | WP_074412167.1 | hypothetical protein | - |
| LIO32_RS03850 | 749198..750100 | + | 903 | WP_161944493.1 | glycosyltransferase family A protein | - |
| LIO32_RS03855 | 750097..751512 | + | 1416 | WP_024390814.1 | oligosaccharide flippase family protein | - |
| LIO32_RS03860 | 751684..753189 | + | 1506 | WP_024390813.1 | UDP-glucose 6-dehydrogenase | VF |
| LIO32_RS03865 | 753301..754548 | - | 1248 | WP_074389816.1 | ISL3 family transposase IS1193D | Transposase |
| LIO32_RS03870 | 754711..755880 | - | 1170 | Protein_728 | IS66 family transposase ISSwo2 | Transposase |
| LIO32_RS03875 | 755834..756034 | - | 201 | WP_013730290.1 | IS66 family transposase ISBthe6 | Transposase |
| LIO32_RS03880 | 756107..756244 | - | 138 | Protein_730 | IS110 family transposase | - |
| LIO32_RS03885 | 756323..756508 | + | 186 | WP_013730291.1 | hypothetical protein | - |
| LIO32_RS03890 | 756540..757439 | - | 900 | WP_074389817.1 | Tyrosine recombinase XerD | VF |
| LIO32_RS03895 | 757847..758836 | - | 990 | WP_018379641.1 | hypothetical protein | - |
| LIO32_RS03900 | 759050..760330 | + | 1281 | WP_014636887.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| LIO32_RS03905 | 760339..760830 | + | 492 | WP_014636886.1 | shikimate kinase | - |
| LIO32_RS03910 | 760821..761648 | + | 828 | WP_024381706.1 | prephenate dehydratase | - |
| LIO32_RS03915 | 761660..762982 | + | 1323 | WP_013730298.1 | LCP family protein | - |
| LIO32_RS03920 | 763049..764410 | + | 1362 | WP_024394786.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| LIO32_RS03925 | 764621..764788 | + | 168 | WP_172046048.1 | hypothetical protein | - |
| LIO32_RS03930 | 764791..765609 | + | 819 | WP_172046049.1 | replication initiator protein A | - |
| LIO32_RS03935 | 765758..767113 | + | 1356 | WP_172046050.1 | DNA (cytosine-5-)-methyltransferase | - |
| LIO32_RS03940 | 767097..767525 | + | 429 | WP_024383464.1 | hypothetical protein | - |
| LIO32_RS03945 | 767536..767919 | + | 384 | WP_024401259.1 | arsenate reductase | - |
| LIO32_RS03950 | 767928..768161 | + | 234 | WP_172046051.1 | transcriptional regulator | - |
| LIO32_RS03955 | 768164..768748 | + | 585 | WP_172046052.1 | CPBP family intramembrane metalloprotease | - |
| LIO32_RS03960 | 768826..769314 | + | 489 | WP_002936460.1 | hypothetical protein | - |
| LIO32_RS03965 | 769314..770588 | + | 1275 | Protein_747 | type IV secretory system conjugative DNA transfer family protein | - |
| LIO32_RS03970 | 771398..773308 | + | 1911 | WP_079844892.1 | group II intron reverse transcriptase/maturase | - |
| LIO32_RS03975 | 773412..773951 | + | 540 | Protein_749 | TraG/TraD/VirD4 family protein | - |
| LIO32_RS03980 | 773969..774211 | + | 243 | WP_001072171.1 | hypothetical protein | - |
| LIO32_RS03985 | 774230..775084 | + | 855 | WP_024399356.1 | conjugal transfer protein TrbL | - |
| LIO32_RS03990 | 775146..775499 | + | 354 | WP_014636633.1 | PrgI family protein | - |
| LIO32_RS03995 | 775456..777807 | + | 2352 | WP_170240187.1 | AAA family ATPase | - |
| LIO32_RS04000 | 777809..780610 | + | 2802 | WP_172046053.1 | phage tail tip lysozyme | - |
| LIO32_RS04005 | 780732..781325 | + | 594 | WP_032510474.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LIO32_RS04010 | 781322..782164 | + | 843 | WP_032510476.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LIO32_RS04015 | 782171..782398 | + | 228 | WP_029750527.1 | hypothetical protein | - |
| LIO32_RS04020 | 782929..784221 | + | 1293 | WP_172046079.1 | IS110 family transposase ISSsu7 | Transposase |
| LIO32_RS04025 | 784529..789424 | + | 4896 | WP_172046047.1 | hypothetical protein | VF |
| LIO32_RS04030 | 789425..789616 | + | 192 | WP_044693404.1 | calcium-binding protein | - |
| LIO32_RS04035 | 789600..790151 | + | 552 | WP_074389831.1 | hypothetical protein | - |
| LIO32_RS04040 | 790202..794011 | + | 3810 | Protein_762 | N-6 DNA methylase | - |
| LIO32_RS04045 | 794011..794442 | + | 432 | Protein_763 | peptidylprolyl isomerase | - |
| LIO32_RS04050 | 794481..794885 | + | 405 | Protein_764 | DNA primase | - |
| LIO32_RS04055 | 794887..794955 | + | 69 | Protein_765 | DUF5945 family protein | - |
| LIO32_RS04060 | 795005..795295 | + | 291 | WP_024405543.1 | hypothetical protein | - |
| LIO32_RS04065 | 795365..795841 | + | 477 | WP_024405542.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| LIO32_RS04070 | 795841..796617 | + | 777 | WP_024405541.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| LIO32_RS04075 | 796614..797513 | + | 900 | WP_216092534.1 | AAA family ATPase | - |
| LIO32_RS04080 | 797617..797805 | + | 189 | Protein_770 | nuclear transport factor 2 family protein | - |
| LIO32_RS04085 | 797818..798468 | + | 651 | WP_216092535.1 | SAP domain-containing protein | - |
| LIO32_RS04090 | 798758..799870 | + | 1113 | WP_172046046.1 | UDP-galactopyranose mutase | - |
| LIO32_RS04095 | 799967..800512 | - | 546 | WP_002941732.1 | NADPH-dependent FMN reductase | - |
| LIO32_RS04100 | 800575..801024 | - | 450 | WP_024383028.1 | MarR family transcriptional regulator | - |
| LIO32_RS04105 | 801326..801823 | + | 498 | WP_024405519.1 | DUF5590 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|