MGE detailed information
MGE type: Genomic_island MGE length: 35053 bp
Accession: NZ_CP085085 Location: 1004806..1039858 Organism: Streptococcus suis strain Ssuis_MA8 Replicon: chromosome
Accession: NZ_CP085085 Location: 1004806..1039858 Organism: Streptococcus suis strain Ssuis_MA8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIO34_RS05110 | 1000362..1001366 | - | 1005 | WP_002935036.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
| LIO34_RS05115 | 1001431..1002267 | - | 837 | WP_002935037.1 | AraC family transcriptional regulator | - |
| LIO34_RS05120 | 1002344..1003678 | - | 1335 | WP_002935038.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| LIO34_RS05125 | 1003874..1004623 | - | 750 | WP_002935039.1 | HAD family hydrolase | - |
| LIO34_RS05130 | 1004806..1006008 | - | 1203 | WP_024401217.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LIO34_RS05135 | 1006031..1006258 | - | 228 | WP_001258320.1 | DUF3173 family protein | - |
| LIO34_RS05140 | 1006536..1006760 | - | 225 | WP_002935042.1 | helix-turn-helix transcriptional regulator | - |
| LIO34_RS05145 | 1006926..1007660 | - | 735 | WP_002935043.1 | ABC transporter permease | - |
| LIO34_RS05150 | 1007644..1008408 | - | 765 | WP_024394868.1 | ABC transporter permease | - |
| LIO34_RS05155 | 1008410..1009318 | - | 909 | WP_024401216.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| LIO34_RS05160 | 1009428..1011500 | - | 2073 | WP_024401215.1 | cysteine peptidase family C39 domain-containing protein | - |
| LIO34_RS05165 | 1011523..1014303 | - | 2781 | WP_024394871.1 | type 2 lanthipeptide synthetase LanM family protein | - |
| LIO34_RS05170 | 1014322..1014489 | - | 168 | WP_074391117.1 | lacticin 481 family lantibiotic | - |
| LIO34_RS05175 | 1015028..1015183 | - | 156 | WP_002935048.1 | lacticin 481 family lantibiotic | - |
| LIO34_RS05180 | 1015212..1015367 | - | 156 | WP_002935049.1 | lacticin 481 family lantibiotic | - |
| LIO34_RS05185 | 1015722..1016420 | + | 699 | WP_002935052.1 | Sensory transduction protein regX3 | VF |
| LIO34_RS05190 | 1016436..1017791 | + | 1356 | WP_002935054.1 | HAMP domain-containing sensor histidine kinase | - |
| LIO34_RS05195 | 1017914..1019773 | - | 1860 | WP_024394872.1 | SAG1250 family conjugative relaxase | - |
| LIO34_RS05200 | 1019760..1020125 | - | 366 | WP_018163914.1 | plasmid mobilization relaxosome protein MobC | - |
| LIO34_RS05205 | 1020135..1020494 | - | 360 | WP_002935059.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| LIO34_RS05210 | 1020829..1023297 | - | 2469 | Protein_981 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| LIO34_RS05215 | 1023467..1024204 | - | 738 | WP_001038796.1 | rRNA adenine N-6-methyltransferase | ARG |
| LIO34_RS05220 | 1024329..1024409 | - | 81 | WP_032501554.1 | 23S rRNA methyltransferase attenuator leader peptide ErmL | - |
| LIO34_RS05225 | 1024475..1024708 | - | 234 | WP_020220349.1 | peptide-binding protein | - |
| LIO34_RS05230 | 1024824..1025375 | - | 552 | Protein_985 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| LIO34_RS05235 | 1025454..1026221 | - | 768 | WP_001235242.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| LIO34_RS05240 | 1026221..1026697 | - | 477 | WP_000578719.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| LIO34_RS05245 | 1026767..1027057 | - | 291 | WP_000667951.1 | hypothetical protein | - |
| LIO34_RS05250 | 1027108..1027497 | - | 390 | WP_000048066.1 | DUF5945 family protein | - |
| LIO34_RS05255 | 1027494..1027721 | - | 228 | WP_000110922.1 | DUF5965 family protein | - |
| LIO34_RS05260 | 1027749..1028849 | - | 1101 | WP_000196860.1 | toprim domain-containing protein | - |
| LIO34_RS05265 | 1028913..1030769 | - | 1857 | WP_001820670.1 | IS607 family transposase ISNma20 | Transposase |
| LIO34_RS05270 | 1030824..1031087 | - | 264 | WP_000253176.1 | hypothetical protein | - |
| LIO34_RS05275 | 1031087..1031317 | - | 231 | WP_001206986.1 | PC4/YdbC family ssDNA-binding protein | - |
| LIO34_RS05280 | 1031363..1032217 | - | 855 | WP_000743700.1 | ParB/RepB/Spo0J family partition protein | - |
| LIO34_RS05285 | 1032226..1033191 | - | 966 | WP_001820668.1 | MobV family relaxase | - |
| LIO34_RS05290 | 1033709..1034740 | - | 1032 | WP_081201666.1 | AAA family ATPase | - |
| LIO34_RS05295 | 1034992..1035108 | - | 117 | Protein_998 | RNA polymerase subunit sigma | - |
| LIO34_RS05300 | 1035199..1035369 | - | 171 | WP_000331638.1 | hypothetical protein | - |
| LIO34_RS05305 | 1035453..1035878 | - | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| LIO34_RS05310 | 1035973..1036485 | - | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| LIO34_RS05315 | 1036973..1037143 | - | 171 | WP_004614788.1 | cysteine-rich KTR domain-containing protein | - |
| LIO34_RS05320 | 1037198..1039117 | - | 1920 | WP_014636291.1 | Tetracycline resistance protein TetO | VF |
| LIO34_RS05325 | 1039484..1039858 | - | 375 | WP_001129922.1 | TnpV protein | - |
| LIO34_RS05330 | 1039798..1040529 | - | 732 | WP_172005819.1 | peptidylprolyl isomerase | - |
| LIO34_RS05335 | 1040625..1040915 | - | 291 | WP_002935084.1 | DUF5966 family protein | - |
| LIO34_RS05340 | 1040929..1041228 | - | 300 | WP_024401832.1 | DUF5962 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|