MGE detailed information
MGE type: IScluster/Tn MGE length: 6770 bp
Accession: NZ_CP085077 Location: 47465..54234 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: plasmid unnamed1
Accession: NZ_CP085077 Location: 47465..54234 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH372_RS25600 (42942) | 42942..44012 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| LH372_RS25605 (44031) | 44031..45239 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (45419) | 45419..45476 | - | 58 | NuclAT_1 | - | - |
| - (45419) | 45419..45476 | - | 58 | NuclAT_1 | - | - |
| - (45419) | 45419..45476 | - | 58 | NuclAT_1 | - | - |
| - (45419) | 45419..45476 | - | 58 | NuclAT_1 | - | - |
| LH372_RS25610 (45546) | 45546..46328 | - | 783 | WP_023063753.1 | protein FinQ | - |
| LH372_RS25615 (46524) | 46524..46841 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| LH372_RS25620 (46838) | 46838..47371 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| LH372_RS25625 (47465) | 47465..48610 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| LH372_RS25635 (49815) | 49815..49913 | + | 99 | Protein_55 | ethanolamine utilization protein EutE | - |
| LH372_RS25640 (49985) | 49985..50194 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| LH372_RS25645 (50586) | 50586..50762 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| LH372_RS25650 (50827) | 50827..51123 | - | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| LH372_RS25655 (51423) | 51423..51674 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| LH372_RS25660 (51746) | 51746..51898 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (51950) | 51950..52010 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (51950) | 51950..52010 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (51950) | 51950..52010 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (51950) | 51950..52010 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| LH372_RS25665 (52219) | 52219..52593 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| LH372_RS25670 (52746) | 52746..53903 | + | 1158 | Protein_62 | IS1380 family transposase ISEcp1 | Transposase |
| LH372_RS25675 (53959) | 53959..54656 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| LH372_RS25680 (54667) | 54667..54975 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| LH372_RS25685 (55417) | 55417..55704 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| LH372_RS25690 (55742) | 55742..55900 | - | 159 | Protein_66 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|