MGE detailed information
MGE type: IScluster/Tn MGE length: 8881 bp
Accession: NZ_CP085075 Location: 87982..96862 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: plasmid pNDM_P21_SE1_04.20
Accession: NZ_CP085075 Location: 87982..96862 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: plasmid pNDM_P21_SE1_04.20
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH372_RS24525 (83734) | 83734..85011 | + | 1278 | WP_001083369.1 | MFS transporter | - |
| LH372_RS24530 (85008) | 85008..86441 | + | 1434 | WP_024170639.1 | glycoside hydrolase family 32 protein | - |
| LH372_RS24535 (86636) | 86636..87958 | + | 1323 | Protein_98 | carbohydrate porin | - |
| LH372_RS24545 (89053) | 89053..89157 | - | 105 | Protein_100 | thiosulfate reductase cytochrome B subunit | - |
| LH372_RS24550 (89214) | 89214..89907 | + | 694 | Protein_101 | IS1 family transposase | - |
| LH372_RS24555 (90034) | 90034..90546 | + | 513 | WP_223350513.1 | potassium channel family protein | - |
| LH372_RS24560 (90631) | 90631..90882 | + | 252 | Protein_103 | iron-containing alcohol dehydrogenase | - |
| LH372_RS24565 (91171) | 91171..91488 | - | 318 | Protein_104 | IS110 family transposase | - |
| LH372_RS24570 (91643) | 91643..91748 | + | 106 | Protein_105 | plasmid SOS inhibition protein A | - |
| - (91717) | 91717..91915 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (91717) | 91717..91915 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (91717) | 91717..91915 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (91717) | 91717..91915 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| LH372_RS24575 (91922) | 91922..92071 | + | 150 | Protein_106 | DUF5431 family protein | - |
| LH372_RS24580 (92022) | 92022..92138 | + | 117 | WP_001375150.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| LH372_RS24585 (92439) | 92439..92736 | - | 298 | Protein_108 | hypothetical protein | - |
| LH372_RS24590 (92806) | 92806..93012 | + | 207 | WP_000275854.1 | hypothetical protein | - |
| LH372_RS24595 (93037) | 93037..93324 | + | 288 | WP_000107242.1 | hypothetical protein | - |
| LH372_RS24600 (93443) | 93443..94264 | + | 822 | WP_001234465.1 | DUF932 domain-containing protein | - |
| LH372_RS24605 (94560) | 94560..95132 | - | 573 | WP_000949660.1 | transglycosylase SLT domain-containing protein | - |
| LH372_RS24610 (95502) | 95502..95885 | + | 384 | WP_001063020.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LH372_RS24615 (96076) | 96076..96474 | + | 399 | WP_226907400.1 | hypothetical protein | - |
| LH372_RS24625 (97635) | 97635..97850 | + | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| LH372_RS24630 (97893) | 97893..98258 | + | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| LH372_RS24635 (98273) | 98273..98584 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| LH372_RS24640 (98606) | 98606..99172 | + | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| LH372_RS24645 (99159) | 99159..99887 | + | 729 | WP_001230813.1 | type-F conjugative transfer system secretin TraK | - |
| LH372_RS24650 (99887) | 99887..101314 | + | 1428 | WP_106509571.1 | F-type conjugal transfer pilus assembly protein TraB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|