MGE detailed information
MGE type: Prophage MGE length: 94340 bp
Accession: NZ_CP085074 Location: 4132165..4226504 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: chromosome
Accession: NZ_CP085074 Location: 4132165..4226504 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH372_RS19910 (4127618) | 4127618..4127758 | - | 141 | WP_001742685.1 | protein YjjY | - |
| LH372_RS19915 (4127854) | 4127854..4128570 | + | 717 | WP_001194358.1 | two-component system response regulator ArcA | - |
| LH372_RS19920 (4128629) | 4128629..4129981 | - | 1353 | WP_000920325.1 | cell envelope integrity protein CreD | - |
| LH372_RS19925 (4130039) | 4130039..4131463 | - | 1425 | WP_001219614.1 | two-component system sensor histidine kinase CreC | - |
| LH372_RS19930 (4131463) | 4131463..4132152 | - | 690 | WP_001188664.1 | two-component system response regulator CreB | - |
| LH372_RS19935 (4132165) | 4132165..4132638 | - | 474 | WP_000875487.1 | protein CreA | - |
| LH372_RS19940 (4132849) | 4132849..4133718 | + | 870 | WP_000371666.1 | MDR efflux pump AcrAB transcriptional activator RobA | - |
| LH372_RS19945 (4133715) | 4133715..4134362 | - | 648 | WP_000942368.1 | 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB | - |
| LH372_RS19950 (4134414) | 4134414..4134926 | + | 513 | WP_001742676.1 | inosine/xanthosine triphosphatase | - |
| LH372_RS19955 (4135073) | 4135073..4135399 | - | 327 | WP_000068679.1 | trp operon repressor | - |
| LH372_RS19960 (4135489) | 4135489..4137426 | - | 1938 | WP_000409451.1 | murein transglycosylase | - |
| LH372_RS19965 (4137637) | 4137637..4139304 | + | 1668 | WP_000046749.1 | hypothetical protein | VF |
| LH372_RS19970 (4139411) | 4139411..4139578 | - | 168 | WP_000007433.1 | NadS family protein | - |
| LH372_RS19975 (4139612) | 4139612..4140844 | - | 1233 | WP_000093809.1 | multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR | - |
| LH372_RS19980 (4140865) | 4140865..4142247 | - | 1383 | WP_001029698.1 | DNA repair protein RadA | - |
| LH372_RS19985 (4142296) | 4142296..4143264 | - | 969 | WP_001132956.1 | phosphoserine phosphatase | - |
| LH372_RS19990 (4143370) | 4143370..4144014 | + | 645 | WP_000124615.1 | YtjB family periplasmic protein | - |
| LH372_RS19995 (4144042) | 4144042..4145058 | + | 1017 | WP_000105848.1 | hypothetical protein | VF |
| LH372_RS20000 (4145090) | 4145090..4145353 | + | 264 | Protein_3916 | helix-turn-helix transcriptional regulator | - |
| LH372_RS20005 (4145514) | 4145514..4146233 | - | 720 | WP_000224877.1 | purine-nucleoside phosphorylase | - |
| LH372_RS20010 (4146313) | 4146313..4147536 | - | 1224 | WP_000816471.1 | phosphopentomutase | - |
| LH372_RS20015 (4147588) | 4147588..4148910 | - | 1323 | WP_000477811.1 | thymidine phosphorylase | - |
| LH372_RS20020 (4149037) | 4149037..4149816 | - | 780 | WP_001295412.1 | deoxyribose-phosphate aldolase | - |
| LH372_RS20025 (4150074) | 4150074..4151624 | + | 1551 | WP_001143253.1 | YjjI family glycine radical enzyme | - |
| LH372_RS20030 (4151596) | 4151596..4152459 | + | 864 | WP_001088439.1 | YjjW family glycine radical enzyme activase | - |
| LH372_RS20035 (4152976) | 4152976..4153758 | - | 783 | WP_000563060.1 | metal-dependent hydrolase | - |
| LH372_RS20040 (4153755) | 4153755..4154828 | - | 1074 | WP_001543400.1 | patatin family protein | - |
| LH372_RS20045 (4154950) | 4154950..4155111 | - | 162 | WP_000490275.1 | DUF1328 domain-containing protein | - |
| LH372_RS20050 (4155238) | 4155238..4155843 | - | 606 | WP_001295748.1 | molecular chaperone OsmY | - |
| LH372_RS20055 (4156236) | 4156236..4157822 | - | 1587 | WP_000202564.1 | peptide chain release factor 3 | - |
| LH372_RS20060 (4158042) | 4158042..4158302 | + | 261 | WP_001217545.1 | DinI-like family protein | - |
| LH372_RS20065 (4158636) | 4158636..4160264 | + | 1629 | WP_223370176.1 | hypothetical protein | VF |
| LH372_RS20070 (4160438) | 4160438..4160680 | - | 243 | Protein_3930 | recombinase family protein | - |
| LH372_RS20075 (4160709) | 4160709..4160840 | - | 132 | Protein_3931 | tail fiber assembly protein | - |
| LH372_RS20080 (4160892) | 4160892..4161776 | - | 885 | WP_223372511.1 | tail fiber domain-containing protein | - |
| LH372_RS20085 (4163673) | 4163673..4164665 | - | 993 | Protein_3933 | prophage tail fiber N-terminal domain-containing protein | - |
| LH372_RS20090 (4164730) | 4164730..4165329 | - | 600 | WP_032329899.1 | hypothetical protein | VF |
| LH372_RS20095 (4165400) | 4165400..4168897 | - | 3498 | WP_061357298.1 | host specificity protein J | - |
| LH372_RS20100 (4168958) | 4168958..4169605 | - | 648 | WP_001399694.1 | tail assembly protein | - |
| LH372_RS20105 (4169503) | 4169503..4170246 | - | 744 | WP_032147298.1 | C40 family peptidase | - |
| LH372_RS20110 (4170252) | 4170252..4170950 | - | 699 | WP_001537716.1 | phage minor tail protein L | - |
| LH372_RS20115 (4170960) | 4170960..4171289 | - | 330 | WP_000447253.1 | phage tail protein | - |
| LH372_RS20120 (4171289) | 4171289..4174345 | - | 3057 | WP_061357299.1 | phage tail tape measure protein | - |
| LH372_RS20125 (4174317) | 4174317..4174646 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| LH372_RS20130 (4174655) | 4174655..4175041 | - | 387 | WP_001299384.1 | phage minor tail protein G | - |
| LH372_RS20135 (4175102) | 4175102..4175845 | - | 744 | WP_000211109.1 | phage tail protein | - |
| LH372_RS20140 (4175857) | 4175857..4176258 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| LH372_RS20145 (4176255) | 4176255..4176833 | - | 579 | WP_000677106.1 | phage tail protein | - |
| LH372_RS20150 (4176845) | 4176845..4177120 | - | 276 | WP_001283147.1 | DNA breaking-rejoining protein | - |
| LH372_RS20155 (4177113) | 4177113..4177436 | - | 324 | WP_001097046.1 | DUF2190 family protein | - |
| LH372_RS20160 (4177523) | 4177523..4179550 | - | 2028 | WP_001136591.1 | hypothetical protein | VF |
| LH372_RS20165 (4179495) | 4179495..4181075 | - | 1581 | WP_077631867.1 | phage portal protein | - |
| LH372_RS20170 (4181003) | 4181003..4181215 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| LH372_RS20175 (4181212) | 4181212..4183314 | - | 2103 | WP_061357300.1 | phage terminase large subunit family protein | - |
| LH372_RS20180 (4183314) | 4183314..4183808 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| LH372_RS20185 (4184193) | 4184193..4184384 | + | 192 | WP_001564342.1 | hypothetical protein | - |
| LH372_RS20190 (4184515) | 4184515..4184667 | - | 153 | WP_001564341.1 | hypothetical protein | - |
| LH372_RS25810 (4184655) | 4184655..4185122 | - | 468 | WP_001564340.1 | lysis protein | - |
| LH372_RS20205 (4185119) | 4185119..4185616 | - | 498 | WP_001135250.1 | lysozyme RrrD | - |
| LH372_RS20210 (4185616) | 4185616..4185831 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| LH372_RS20215 (4185899) | 4185899..4186951 | - | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| LH372_RS20220 (4187101) | 4187101..4187295 | - | 195 | WP_001355891.1 | hypothetical protein | - |
| LH372_RS20225 (4187544) | 4187544..4188704 | + | 1161 | WP_001564338.1 | DUF262 domain-containing protein | - |
| LH372_RS20230 (4188707) | 4188707..4189396 | + | 690 | WP_001564336.1 | MAE_28990/MAE_18760 family HEPN-like nuclease | - |
| LH372_RS20235 (4189365) | 4189365..4190405 | - | 1041 | WP_001025377.1 | DNA cytosine methyltransferase | - |
| LH372_RS20240 (4190485) | 4190485..4190838 | - | 354 | WP_021534260.1 | antiterminator Q family protein | - |
| LH372_RS20245 (4190856) | 4190856..4191845 | - | 990 | WP_024172633.1 | DUF968 domain-containing protein | - |
| LH372_RS20250 (4191853) | 4191853..4192662 | - | 810 | WP_033547789.1 | KilA-N domain-containing protein | - |
| LH372_RS20255 (4192682) | 4192682..4193071 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LH372_RS20260 (4193068) | 4193068..4193394 | - | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| LH372_RS20265 (4193412) | 4193412..4193726 | - | 315 | Protein_3968 | hypothetical protein | - |
| LH372_RS20270 (4193723) | 4193723..4194664 | - | 942 | WP_033547788.1 | helix-turn-helix domain-containing protein | - |
| LH372_RS20275 (4194654) | 4194654..4194833 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| LH372_RS20280 (4195009) | 4195009..4195566 | - | 558 | WP_000526668.1 | protein YmfL | - |
| LH372_RS20285 (4195559) | 4195559..4195819 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| LH372_RS20290 (4195917) | 4195917..4196609 | + | 693 | WP_001020632.1 | XRE family transcriptional regulator | - |
| LH372_RS20295 (4197389) | 4197389..4197751 | + | 363 | WP_000135682.1 | protein YfdP | - |
| LH372_RS20300 (4197817) | 4197817..4198641 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| LH372_RS20305 (4198770) | 4198770..4199306 | + | 537 | WP_000008217.1 | 5'-deoxynucleotidase | - |
| LH372_RS20310 (4199297) | 4199297..4200175 | + | 879 | WP_000335011.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| LH372_RS20315 (4200172) | 4200172..4200519 | + | 348 | WP_000206056.1 | hypothetical protein | - |
| LH372_RS20320 (4200996) | 4200996..4202237 | - | 1242 | WP_015364392.1 | hypothetical protein | - |
| LH372_RS20325 (4202422) | 4202422..4203645 | - | 1224 | WP_001218286.1 | hypothetical protein ; Integrase | Integrase |
| LH372_RS20330 (4204031) | 4204031..4204708 | - | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
| LH372_RS20335 (4204723) | 4204723..4205169 | - | 447 | WP_001092461.1 | hypothetical protein | VF |
| LH372_RS20340 (4205138) | 4205138..4205551 | - | 414 | WP_000204018.1 | DNA polymerase III subunit psi | - |
| LH372_RS20345 (4205654) | 4205654..4206685 | + | 1032 | WP_001272323.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| LH372_RS20365 (4207346) | 4207346..4207582 | - | 237 | WP_001360092.1 | DUF1435 domain-containing protein | - |
| LH372_RS20370 (4207723) | 4207723..4208511 | + | 789 | WP_000331550.1 | siderophore-iron reductase FhuF | - |
| LH372_RS20375 (4208549) | 4208549..4209226 | - | 678 | WP_004020501.1 | hypothetical protein | VF |
| LH372_RS20380 (4209184) | 4209184..4209909 | - | 726 | WP_000936635.1 | hypothetical protein | VF |
| LH372_RS20385 (4210528) | 4210528..4211298 | + | 771 | WP_001340933.1 | threonine/serine exporter ThrE family protein | - |
| LH372_RS20390 (4211289) | 4211289..4211762 | + | 474 | WP_000538188.1 | threonine/serine exporter | - |
| LH372_RS20395 (4211869) | 4211869..4212408 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| LH372_RS20400 (4212411) | 4212411..4213148 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| LH372_RS20405 (4213197) | 4213197..4213691 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| LH372_RS20410 (4213945) | 4213945..4216236 | + | 2292 | WP_001292661.1 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| LH372_RS20415 (4216376) | 4216376..4217398 | - | 1023 | WP_000106027.1 | L-galactonate oxidoreductase | - |
| LH372_RS20420 (4217537) | 4217537..4218451 | + | 915 | WP_000091587.1 | GntR family transcriptional regulator | - |
| LH372_RS20425 (4218665) | 4218665..4220026 | + | 1362 | WP_000410144.1 | MFS transporter | - |
| LH372_RS20430 (4220075) | 4220075..4221739 | - | 1665 | WP_000919537.1 | hypothetical protein | VF |
| LH372_RS20435 (4222116) | 4222116..4224266 | + | 2151 | WP_001295524.1 | pyruvate/proton symporter BtsT | - |
| LH372_RS20440 (4224316) | 4224316..4224519 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| LH372_RS20445 (4224530) | 4224530..4225486 | + | 957 | WP_001297640.1 | GTPase | - |
| LH372_RS20450 (4225520) | 4225520..4225822 | - | 303 | WP_000063160.1 | BrnA antitoxin family protein | Antitoxin Detail |
| LH372_RS20455 (4225809) | 4225809..4226096 | - | 288 | WP_001297643.1 | BrnT family toxin | Toxin Detail |
| LH372_RS20460 (4226295) | 4226295..4226991 | - | 697 | Protein_4004 | IS1 family transposase | - |
| LH372_RS20465 (4227306) | 4227306..4228538 | + | 1233 | WP_001137030.1 | multidrug efflux MFS transporter MdtM | - |
| LH372_RS20470 (4228579) | 4228579..4229859 | + | 1281 | WP_001037390.1 | DUF445 domain-containing protein | - |
| LH372_RS20475 (4229975) | 4229975..4231126 | + | 1152 | WP_001324743.1 | double-cubane-cluster-containing anaerobic reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|