MGE detailed information
MGE type: Prophage MGE length: 24429 bp
Accession: NZ_CP085074 Location: 3820440..3844868 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: chromosome
Accession: NZ_CP085074 Location: 3820440..3844868 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH372_RS18450 (3815611) | 3815611..3816567 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| LH372_RS18455 (3816618) | 3816618..3816956 | + | 339 | Protein_3615 | LysR substrate-binding domain-containing protein | - |
| LH372_RS18460 (3817300) | 3817300..3817659 | + | 360 | WP_001405000.1 | hypothetical protein | - |
| LH372_RS18465 (3817652) | 3817652..3818194 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| LH372_RS18470 (3818315) | 3818315..3818500 | - | 186 | WP_000188903.1 | hypothetical protein | - |
| LH372_RS18475 (3818635) | 3818635..3818916 | - | 282 | WP_040075123.1 | PerC family transcriptional regulator | - |
| LH372_RS18480 (3819130) | 3819130..3819801 | - | 672 | WP_097733949.1 | peptidase M41 family protein | - |
| LH372_RS18485 (3819801) | 3819801..3819974 | - | 174 | WP_001565834.1 | hypothetical protein | - |
| LH372_RS18490 (3820440) | 3820440..3822881 | - | 2442 | WP_115734777.1 | phage/plasmid primase, P4 family | - |
| LH372_RS18495 (3822874) | 3822874..3823215 | - | 342 | WP_032236944.1 | hypothetical protein | - |
| LH372_RS18500 (3823225) | 3823225..3823851 | - | 627 | WP_040075116.1 | hypothetical protein | - |
| LH372_RS18505 (3823848) | 3823848..3824111 | - | 264 | WP_047608019.1 | hypothetical protein | - |
| LH372_RS18510 (3824108) | 3824108..3824422 | - | 315 | WP_115734776.1 | ubiquinol-cytochrome C reductase | - |
| LH372_RS18515 (3824419) | 3824419..3824598 | - | 180 | WP_001565828.1 | hypothetical protein | - |
| LH372_RS18520 (3824591) | 3824591..3825295 | - | 705 | WP_072217902.1 | host cell division inhibitor Icd-like protein | - |
| LH372_RS18525 (3825282) | 3825282..3825464 | - | 183 | WP_001244025.1 | DUF4222 domain-containing protein | - |
| LH372_RS18530 (3825457) | 3825457..3826290 | - | 834 | WP_032236942.1 | antA/AntB antirepressor family protein | - |
| LH372_RS18535 (3826303) | 3826303..3826734 | - | 432 | WP_063112866.1 | hypothetical protein | - |
| LH372_RS18540 (3826734) | 3826734..3826931 | - | 198 | WP_000083330.1 | AlpA family transcriptional regulator | - |
| LH372_RS18545 (3827129) | 3827129..3828010 | - | 882 | WP_063112867.1 | DUF6387 family protein | - |
| LH372_RS18550 (3828153) | 3828153..3829367 | - | 1215 | WP_063112868.1 | hypothetical protein ; Integrase | Integrase |
| LH372_RS18560 (3829723) | 3829723..3830976 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LH372_RS18565 (3830988) | 3830988..3832091 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LH372_RS18570 (3832379) | 3832379..3833434 | + | 1056 | WP_039023169.1 | phosphoporin PhoE | - |
| LH372_RS18575 (3833473) | 3833473..3833874 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3834592) | 3834592..3834672 | - | 81 | NuclAT_13 | - | - |
| - (3834592) | 3834592..3834672 | - | 81 | NuclAT_13 | - | - |
| - (3834592) | 3834592..3834672 | - | 81 | NuclAT_13 | - | - |
| - (3834592) | 3834592..3834672 | - | 81 | NuclAT_13 | - | - |
| LH372_RS18580 (3833932) | 3833932..3835176 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| LH372_RS18585 (3835268) | 3835268..3835726 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LH372_RS18590 (3835987) | 3835987..3837444 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| LH372_RS18595 (3837501) | 3837501..3838022 | - | 522 | Protein_3642 | peptide chain release factor H | - |
| LH372_RS18600 (3838018) | 3838018..3838224 | - | 207 | Protein_3643 | RtcB family protein | - |
| LH372_RS18605 (3838542) | 3838542..3838994 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| LH372_RS18610 (3839004) | 3839004..3839402 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LH372_RS18615 (3839405) | 3839405..3839698 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LH372_RS18620 (3839750) | 3839750..3840805 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| LH372_RS18625 (3840876) | 3840876..3841661 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| LH372_RS18630 (3841633) | 3841633..3843345 | + | 1713 | Protein_3649 | hypothetical protein | VF |
| LH372_RS18635 (3843569) | 3843569..3844066 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| LH372_RS18640 (3844242) | 3844242..3844991 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| LH372_RS18645 (3845201) | 3845201..3845461 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| LH372_RS18650 (3845464) | 3845464..3845742 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| LH372_RS18655 (3845898) | 3845898..3846638 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LH372_RS18660 (3846609) | 3846609..3847376 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| LH372_RS18665 (3847582) | 3847582..3848160 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|