MGE detailed information
MGE type: Mobilizable plasmid MGE length: 48551 bp
Accession: NZ_CP085071 Location: 1..48551 Organism: Escherichia coli strain P27_L1_05.20 Replicon: plasmid unnamed1
Accession: NZ_CP085071 Location: 1..48551 Organism: Escherichia coli strain P27_L1_05.20 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH371_RS24830 (46) | 46..1077 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| LH371_RS24835 (2146) | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| LH371_RS24840 (2711) | 2711..3313 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| LH371_RS24845 (3667) | 3667..5013 | + | 1347 | WP_039052405.1 | protein YagA | - |
| LH371_RS24850 (5528) | 5528..5830 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| LH371_RS24855 (5827) | 5827..6453 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| LH371_RS24860 (6641) | 6641..7912 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| LH371_RS24865 (7912) | 7912..8349 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LH371_RS24870 (8346) | 8346..8594 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| LH371_RS24875 (9012) | 9012..9914 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| LH371_RS24880 (9918) | 9918..10004 | + | 87 | Protein_10 | hypothetical protein | - |
| LH371_RS24885 (10009) | 10009..10344 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| LH371_RS24890 (10682) | 10682..11662 | + | 981 | WP_226908832.1 | plasmid segregation protein ParM | - |
| LH371_RS24895 (11665) | 11665..12087 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| LH371_RS24900 (12091) | 12091..12401 | + | 311 | Protein_14 | hypothetical protein | - |
| LH371_RS24905 (12477) | 12477..13160 | + | 684 | WP_000086127.1 | DNA methylase | - |
| LH371_RS24910 (13161) | 13161..13382 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| LH371_RS24915 (13312) | 13312..13830 | + | 519 | WP_202864534.1 | DUF1380 family protein | - |
| LH371_RS24920 (13875) | 13875..14645 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| LH371_RS24925 (15063) | 15063..15488 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| LH371_RS24930 (15535) | 15535..15957 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| LH371_RS24935 (15954) | 15954..16145 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| LH371_RS24940 (16216) | 16216..16530 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| LH371_RS24945 (17565) | 17565..19466 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| LH371_RS24950 (19649) | 19649..20938 | + | 1290 | Protein_24 | hypothetical protein | - |
| LH371_RS24955 (20991) | 20991..21425 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| LH371_RS24960 (21422) | 21422..22141 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| LH371_RS24965 (22138) | 22138..22734 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| LH371_RS24970 (23196) | 23196..23696 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| LH371_RS24975 (24425) | 24425..24859 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| LH371_RS24980 (24953) | 24953..25219 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| LH371_RS24985 (25396) | 25396..25785 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| LH371_RS24990 (25782) | 25782..26684 | + | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| LH371_RS24995 (26746) | 26746..26952 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| LH371_RS25000 (26983) | 26983..27234 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| LH371_RS25005 (27814) | 27814..28662 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| LH371_RS25010 (28749) | 28749..29084 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| LH371_RS25015 (29318) | 29318..29650 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| LH371_RS25020 (29661) | 29661..32360 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| LH371_RS25025 (32398) | 32398..34689 | - | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| LH371_RS25030 (34682) | 34682..35752 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| LH371_RS25035 (35771) | 35771..36979 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (37159) | 37159..37216 | - | 58 | NuclAT_1 | - | - |
| - (37159) | 37159..37216 | - | 58 | NuclAT_1 | - | - |
| - (37159) | 37159..37216 | - | 58 | NuclAT_1 | - | - |
| - (37159) | 37159..37216 | - | 58 | NuclAT_1 | - | - |
| LH371_RS25040 (37286) | 37286..38068 | - | 783 | WP_023063753.1 | protein FinQ | - |
| LH371_RS25045 (38264) | 38264..38581 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| LH371_RS25050 (38578) | 38578..39111 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| LH371_RS25055 (39205) | 39205..40350 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| LH371_RS25065 (41555) | 41555..41653 | + | 99 | Protein_47 | ethanolamine utilization protein EutE | - |
| LH371_RS25070 (41725) | 41725..41934 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| LH371_RS25075 (42326) | 42326..42502 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| LH371_RS25080 (42567) | 42567..42863 | - | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| LH371_RS25085 (43163) | 43163..43414 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| LH371_RS25090 (43486) | 43486..43638 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (43690) | 43690..43750 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43690) | 43690..43750 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43690) | 43690..43750 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43690) | 43690..43750 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| LH371_RS25095 (43959) | 43959..44333 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| LH371_RS25100 (44486) | 44486..45643 | + | 1158 | Protein_54 | IS1380 family transposase ISEcp1 | Transposase |
| LH371_RS25105 (45699) | 45699..46396 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| LH371_RS25110 (46407) | 46407..46715 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| LH371_RS25115 (47157) | 47157..47444 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| LH371_RS25120 (47482) | 47482..47640 | - | 159 | Protein_58 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|