MGE detailed information
MGE type: Genomic_island MGE length: 52570 bp
Accession: NZ_CP085069 Location: 4265455..4318024 Organism: Escherichia coli strain P27_L1_05.20 Replicon: chromosome
Accession: NZ_CP085069 Location: 4265455..4318024 Organism: Escherichia coli strain P27_L1_05.20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH371_RS20580 (4260934) | 4260934..4261437 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| LH371_RS20585 (4261450) | 4261450..4261980 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| LH371_RS20590 (4261990) | 4261990..4264626 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| LH371_RS20595 (4264693) | 4264693..4265418 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| LH371_RS20600 (4265455) | 4265455..4265994 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| LH371_RS20605 (4266059) | 4266059..4266607 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| LH371_RS20610 (4267089) | 4267089..4267685 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| LH371_RS20615 (4268163) | 4268163..4268765 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| LH371_RS20620 (4270221) | 4270221..4270937 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LH371_RS20625 (4270957) | 4270957..4272063 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LH371_RS20630 (4272128) | 4272128..4273108 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LH371_RS20635 (4273218) | 4273218..4273423 | + | 206 | Protein_4029 | HNH endonuclease | - |
| LH371_RS20640 (4273691) | 4273691..4274931 | - | 1241 | Protein_4030 | helicase YjhR | - |
| LH371_RS20645 (4275047) | 4275047..4275178 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LH371_RS20650 (4275669) | 4275669..4275926 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LH371_RS20655 (4275938) | 4275938..4276483 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LH371_RS20660 (4276539) | 4276539..4277285 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LH371_RS20665 (4277454) | 4277454..4277672 | + | 219 | Protein_4035 | hypothetical protein | - |
| LH371_RS20670 (4277710) | 4277710..4277826 | + | 117 | Protein_4036 | VOC family protein | - |
| LH371_RS20675 (4278071) | 4278071..4279192 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LH371_RS20680 (4279189) | 4279189..4279467 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LH371_RS20685 (4279479) | 4279479..4280792 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| LH371_RS20690 (4280805) | 4280805..4281611 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| LH371_RS20695 (4281742) | 4281742..4282173 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| LH371_RS20700 (4282185) | 4282185..4282817 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| LH371_RS20705 (4282834) | 4282834..4283616 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LH371_RS20710 (4283919) | 4283919..4284707 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| LH371_RS20715 (4284712) | 4284712..4285617 | + | 906 | WP_001335841.1 | dihydrodipicolinate synthase family protein | - |
| LH371_RS20720 (4285628) | 4285628..4287595 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| LH371_RS20725 (4287702) | 4287702..4289051 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| LH371_RS20730 (4289398) | 4289398..4290384 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| LH371_RS20735 (4290425) | 4290425..4291270 | - | 846 | WP_016247886.1 | GRP family sugar transporter | - |
| LH371_RS20740 (4291532) | 4291532..4292173 | - | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| LH371_RS20745 (4292204) | 4292204..4293319 | - | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| LH371_RS20750 (4293329) | 4293329..4294588 | - | 1260 | WP_021548606.1 | S-methyl-5-thioribose kinase | - |
| LH371_RS20760 (4295577) | 4295577..4297118 | + | 1542 | WP_001518966.1 | IS21 family transposase ISEc12 | Transposase |
| LH371_RS20765 (4297133) | 4297133..4297879 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| LH371_RS20770 (4298103) | 4298103..4298471 | - | 369 | WP_021548605.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| LH371_RS20775 (4298634) | 4298634..4298855 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| LH371_RS20780 (4298918) | 4298918..4299394 | - | 477 | WP_001186775.1 | RadC family protein | - |
| LH371_RS20785 (4299410) | 4299410..4299883 | - | 474 | WP_001350782.1 | antirestriction protein | - |
| LH371_RS20790 (4300225) | 4300225..4301043 | - | 819 | WP_001234656.1 | DUF932 domain-containing protein | - |
| LH371_RS20795 (4301161) | 4301161..4301356 | - | 196 | Protein_4060 | DUF905 family protein | - |
| LH371_RS20800 (4301427) | 4301427..4304546 | - | 3120 | WP_001774924.1 | autotransporter adhesin Ag43 | - |
| LH371_RS20805 (4304918) | 4304918..4305790 | - | 873 | WP_001565136.1 | GTPase family protein | - |
| LH371_RS20810 (4307020) | 4307020..4308504 | + | 1485 | WP_001297234.1 | YfjI family protein | - |
| LH371_RS20815 (4308826) | 4308826..4309428 | - | 603 | WP_000813451.1 | hypothetical protein | - |
| LH371_RS20820 (4309523) | 4309523..4309729 | - | 207 | WP_000235217.1 | AlpA family transcriptional regulator | - |
| LH371_RS20825 (4310853) | 4310853..4311053 | - | 201 | WP_001297900.1 | hypothetical protein | - |
| LH371_RS20830 (4311253) | 4311253..4311822 | + | 570 | WP_000221515.1 | inovirus Gp2 family protein | - |
| LH371_RS20835 (4312082) | 4312082..4312483 | + | 402 | WP_000270962.1 | putative zinc ribbon protein | - |
| LH371_RS20840 (4312471) | 4312471..4312905 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| LH371_RS20845 (4313260) | 4313260..4313640 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| LH371_RS20850 (4313637) | 4313637..4313984 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| LH371_RS20855 (4314034) | 4314034..4315419 | + | 1386 | WP_000998019.1 | IS66 family transposase ISEc8 | Transposase |
| LH371_RS20860 (4315658) | 4315658..4317016 | - | 1359 | WP_000823250.1 | esterase-like activity of phytase family protein | - |
| LH371_RS20865 (4317298) | 4317298..4317429 | + | 132 | Protein_4074 | IS3 family transposase | - |
| LH371_RS20870 (4317767) | 4317767..4318024 | - | 258 | WP_000555341.1 | biofilm development regulator YmgB/AriR family protein | - |
| LH371_RS20875 (4318363) | 4318363..4318467 | - | 105 | Protein_4076 | IS3 family transposase | - |
| LH371_RS20880 (4318494) | 4318494..4318643 | - | 150 | Protein_4077 | IS3 family transposase | - |
| LH371_RS20885 (4318712) | 4318712..4318774 | + | 63 | WP_113705808.1 | hypothetical protein | - |
| LH371_RS20890 (4318785) | 4318785..4319481 | - | 697 | Protein_4079 | IS1 family transposase | - |
| LH371_RS20895 (4319568) | 4319568..4319636 | - | 69 | WP_211180522.1 | protein YkiE | - |
| LH371_RS20900 (4319773) | 4319773..4320294 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| LH371_RS20905 (4320291) | 4320291..4321244 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|