MGE detailed information
MGE type: Prophage MGE length: 75619 bp
Accession: NZ_CP084900 Location: 3703737..3779355 Organism: Escherichia coli strain EC20 Replicon: chromosome
Accession: NZ_CP084900 Location: 3703737..3779355 Organism: Escherichia coli strain EC20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHL15_RS17910 (3699658) | 3699658..3700368 | + | 711 | WP_064221667.1 | fimbrial chaperone EcpE | - |
| LHL15_RS17915 (3700681) | 3700681..3701010 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| LHL15_RS17925 (3702704) | 3702704..3703319 | - | 616 | Protein_3510 | YagU family protein | - |
| LHL15_RS17930 (3703737) | 3703737..3704426 | + | 690 | WP_000070699.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| LHL15_RS17935 (3704423) | 3704423..3705379 | + | 957 | WP_064221631.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| LHL15_RS17940 (3705376) | 3705376..3707574 | + | 2199 | WP_118972012.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| LHL15_RS17945 (3707584) | 3707584..3708539 | + | 956 | Protein_3514 | molybdenum cofactor insertion chaperone PaoD | - |
| LHL15_RS17950 (3708590) | 3708590..3708928 | + | 339 | Protein_3515 | LysR substrate-binding domain-containing protein | - |
| LHL15_RS17955 (3709327) | 3709327..3710106 | - | 780 | WP_052924176.1 | hypothetical protein | - |
| LHL15_RS17960 (3710107) | 3710107..3710934 | - | 828 | WP_000609023.1 | hypothetical protein | - |
| LHL15_RS17965 (3711427) | 3711427..3711954 | - | 528 | WP_072649949.1 | hypothetical protein | - |
| LHL15_RS17970 (3712054) | 3712054..3712326 | - | 273 | WP_001723130.1 | hypothetical protein | - |
| LHL15_RS17975 (3712323) | 3712323..3712490 | - | 168 | WP_001723129.1 | hypothetical protein | - |
| LHL15_RS17980 (3712506) | 3712506..3712706 | + | 201 | WP_024170960.1 | hypothetical protein | - |
| LHL15_RS17985 (3712769) | 3712769..3713092 | - | 324 | WP_016262937.1 | hypothetical protein | - |
| LHL15_RS17990 (3713157) | 3713157..3714299 | - | 1143 | WP_001723127.1 | hypothetical protein | - |
| LHL15_RS17995 (3714434) | 3714434..3714722 | - | 289 | Protein_3524 | PerC family transcriptional regulator | - |
| LHL15_RS18000 (3714719) | 3714719..3715249 | - | 531 | WP_001723124.1 | ProQ/FinO family protein | - |
| LHL15_RS18005 (3715631) | 3715631..3717436 | - | 1806 | WP_001723123.1 | primase-like DNA-binding domain-containing protein | - |
| LHL15_RS18010 (3717433) | 3717433..3717722 | - | 290 | Protein_3527 | DUF4222 domain-containing protein | - |
| LHL15_RS18015 (3717727) | 3717727..3717927 | - | 201 | WP_000551487.1 | hypothetical protein | - |
| LHL15_RS18020 (3717920) | 3717920..3718153 | - | 234 | WP_001204082.1 | hypothetical protein | - |
| LHL15_RS18025 (3718146) | 3718146..3718511 | - | 366 | WP_001723121.1 | hypothetical protein | - |
| LHL15_RS18030 (3718504) | 3718504..3718728 | - | 225 | WP_000335966.1 | hypothetical protein | - |
| LHL15_RS18035 (3718721) | 3718721..3720028 | - | 1308 | WP_075851460.1 | host cell division inhibitor Icd-like protein | - |
| LHL15_RS18040 (3720021) | 3720021..3720821 | - | 801 | WP_001515791.1 | antA/AntB antirepressor family protein | - |
| LHL15_RS18045 (3720899) | 3720899..3721096 | - | 198 | WP_000072422.1 | AlpA family transcriptional regulator | - |
| LHL15_RS18050 (3721324) | 3721324..3722121 | - | 798 | WP_000565286.1 | hypothetical protein | - |
| LHL15_RS18055 (3722250) | 3722250..3723464 | - | 1215 | WP_041329569.1 | Prophage integrase IntS ; Integrase | Integrase |
| LHL15_RS18060 (3724068) | 3724068..3725033 | - | 966 | WP_000049501.1 | hypothetical protein | - |
| LHL15_RS18065 (3725701) | 3725701..3726915 | + | 1215 | WP_012602456.1 | type II restriction endonuclease | - |
| LHL15_RS18070 (3726950) | 3726950..3728383 | - | 1434 | WP_001288444.1 | DNA cytosine methyltransferase | - |
| LHL15_RS18075 (3728790) | 3728790..3729563 | + | 774 | WP_000355482.1 | hypothetical protein | - |
| LHL15_RS18080 (3729633) | 3729633..3729764 | - | 132 | Protein_3541 | tail fiber assembly protein | - |
| LHL15_RS18085 (3729816) | 3729816..3730619 | - | 804 | WP_226762406.1 | tail fiber domain-containing protein | - |
| LHL15_RS18090 (3732582) | 3732582..3733574 | - | 993 | Protein_3543 | prophage tail fiber N-terminal domain-containing protein | - |
| LHL15_RS18095 (3733639) | 3733639..3734238 | - | 600 | WP_023566733.1 | Outer membrane protein X | VF |
| LHL15_RS18100 (3734307) | 3734307..3737786 | - | 3480 | WP_191636375.1 | host specificity protein J | - |
| LHL15_RS18105 (3737847) | 3737847..3738419 | - | 573 | WP_001517847.1 | tail assembly protein | - |
| LHL15_RS18110 (3738416) | 3738416..3739159 | - | 744 | WP_072971412.1 | C40 family peptidase | - |
| LHL15_RS18115 (3739165) | 3739165..3739863 | - | 699 | WP_072971415.1 | phage minor tail protein L | - |
| LHL15_RS18120 (3739863) | 3739863..3740192 | - | 330 | WP_001494851.1 | phage tail protein | - |
| LHL15_RS18125 (3740189) | 3740189..3742789 | - | 2601 | WP_049290766.1 | phage tail tape measure protein | - |
| LHL15_RS18130 (3742782) | 3742782..3743216 | - | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| LHL15_RS18135 (3743198) | 3743198..3743620 | - | 423 | WP_000479193.1 | phage minor tail protein G | - |
| LHL15_RS18140 (3743636) | 3743636..3744376 | - | 741 | WP_024250570.1 | phage tail protein | - |
| LHL15_RS18145 (3744384) | 3744384..3744779 | - | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| LHL15_RS18150 (3744776) | 3744776..3745354 | - | 579 | WP_000985119.1 | phage tail protein | - |
| LHL15_RS18155 (3745366) | 3745366..3745719 | - | 354 | WP_000753001.1 | head-tail joining protein | - |
| LHL15_RS18160 (3745731) | 3745731..3746126 | - | 396 | WP_088224509.1 | DNA-packaging protein FI | - |
| LHL15_RS18165 (3746168) | 3746168..3747193 | - | 1026 | WP_029395141.1 | major capsid protein | - |
| LHL15_RS18170 (3747249) | 3747249..3747581 | - | 333 | WP_040092234.1 | head decoration protein | - |
| LHL15_RS18175 (3747591) | 3747591..3748910 | - | 1320 | WP_088224510.1 | S49 family peptidase | - |
| LHL15_RS18180 (3748891) | 3748891..3750492 | - | 1602 | WP_088224511.1 | phage portal protein | - |
| LHL15_RS18185 (3750489) | 3750489..3750695 | - | 207 | WP_000198149.1 | gpW family protein | - |
| LHL15_RS18190 (3750692) | 3750692..3752617 | - | 1926 | WP_001027292.1 | phage terminase large subunit family protein | - |
| LHL15_RS18195 (3752592) | 3752592..3753137 | - | 546 | WP_000453580.1 | DNA-packaging protein | - |
| LHL15_RS18200 (3753526) | 3753526..3753759 | + | 234 | WP_000105084.1 | YlcI/YnfO family protein | - |
| LHL15_RS18205 (3753816) | 3753816..3754226 | + | 411 | WP_000079508.1 | DUF1398 family protein | - |
| LHL15_RS18210 (3754577) | 3754577..3754729 | - | 153 | WP_001139678.1 | hypothetical protein | - |
| LHL15_RS18215 (3754717) | 3754717..3755154 | - | 438 | WP_001446997.1 | lysis protein | - |
| LHL15_RS18220 (3755151) | 3755151..3755627 | - | 477 | WP_106495053.1 | glycoside hydrolase family protein | - |
| LHL15_RS18225 (3755631) | 3755631..3755957 | - | 327 | WP_001120496.1 | phage holin, lambda family | - |
| LHL15_RS18230 (3756358) | 3756358..3757107 | + | 750 | WP_000907077.1 | TIGR04255 family protein | - |
| LHL15_RS18235 (3757123) | 3757123..3757467 | + | 345 | WP_125282403.1 | hypothetical protein | - |
| LHL15_RS18240 (3757471) | 3757471..3758085 | + | 615 | WP_000069422.1 | hypothetical protein | - |
| LHL15_RS18245 (3758111) | 3758111..3758455 | - | 345 | WP_106495050.1 | antiterminator Q family protein | - |
| LHL15_RS18250 (3758473) | 3758473..3759462 | - | 990 | WP_024169034.1 | DUF968 domain-containing protein | - |
| LHL15_RS18255 (3759470) | 3759470..3760267 | - | 798 | WP_001061404.1 | KilA-N domain-containing protein | - |
| LHL15_RS18260 (3760287) | 3760287..3760676 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LHL15_RS18265 (3760673) | 3760673..3760999 | - | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| LHL15_RS18270 (3760999) | 3760999..3761493 | - | 495 | WP_106495048.1 | PerC family transcriptional regulator | - |
| LHL15_RS18275 (3761490) | 3761490..3762431 | - | 942 | WP_001377815.1 | helix-turn-helix domain-containing protein | - |
| LHL15_RS18280 (3762421) | 3762421..3762600 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| LHL15_RS18285 (3762776) | 3762776..3763333 | - | 558 | WP_000526668.1 | protein YmfL | - |
| LHL15_RS18290 (3763326) | 3763326..3763586 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| LHL15_RS18295 (3763684) | 3763684..3764376 | + | 693 | WP_001020632.1 | XRE family transcriptional regulator | - |
| LHL15_RS18300 (3765079) | 3765079..3765441 | + | 363 | WP_000135680.1 | protein YfdP | - |
| LHL15_RS18305 (3765507) | 3765507..3766331 | + | 825 | WP_106495044.1 | DUF2303 family protein | - |
| LHL15_RS18310 (3766459) | 3766459..3766995 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| LHL15_RS18315 (3766986) | 3766986..3767348 | + | 363 | WP_001242749.1 | phage protein | - |
| LHL15_RS18320 (3767348) | 3767348..3767653 | + | 306 | WP_000206732.1 | protein YfdT | - |
| LHL15_RS18325 (3767653) | 3767653..3768003 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| LHL15_RS18330 (3767925) | 3767925..3769043 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LHL15_RS18335 (3769385) | 3769385..3770082 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| LHL15_RS18340 (3770099) | 3770099..3771295 | + | 1197 | Protein_3593 | IS21 family transposase ISEc12 | Transposase |
| LHL15_RS18345 (3771310) | 3771310..3772056 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| LHL15_RS18350 (3772141) | 3772141..3772224 | - | 84 | Protein_3595 | DUF5983 family protein | - |
| LHL15_RS18355 (3772221) | 3772221..3772598 | - | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| LHL15_RS18360 (3772688) | 3772688..3773056 | - | 369 | WP_070749977.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LHL15_RS18365 (3773106) | 3773106..3773750 | - | 645 | Protein_3598 | antitoxin of toxin-antitoxin stability system | - |
| LHL15_RS18370 (3773765) | 3773765..3773986 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| LHL15_RS18375 (3774055) | 3774055..3774531 | - | 477 | WP_001186742.1 | RadC family protein | - |
| LHL15_RS18380 (3774545) | 3774545..3775024 | - | 480 | WP_000706976.1 | antirestriction protein | - |
| LHL15_RS18385 (3775118) | 3775118..3775363 | - | 246 | WP_000680584.1 | hypothetical protein | - |
| LHL15_RS18390 (3775363) | 3775363..3776181 | - | 819 | WP_070749978.1 | DUF932 domain-containing protein | - |
| LHL15_RS18395 (3776509) | 3776509..3779355 | - | 2847 | WP_176486894.1 | Ag43/Cah family autotransporter adhesin | - |
| LHL15_RS18400 (3779728) | 3779728..3780600 | - | 873 | WP_070751363.1 | GTPase family protein | - |
| LHL15_RS18405 (3780864) | 3780864..3782420 | + | 1557 | WP_000200813.1 | type I restriction-modification system subunit M | - |
| LHL15_RS18410 (3782417) | 3782417..3783643 | + | 1227 | WP_050019106.1 | restriction endonuclease subunit S | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|