MGE detailed information
MGE type: Prophage MGE length: 45760 bp
Accession: NZ_CP084892 Location: 2340832..2386591 Organism: Staphylococcus aureus strain CC1956/ST4614-MSSA Replicon: chromosome
Accession: NZ_CP084892 Location: 2340832..2386591 Organism: Staphylococcus aureus strain CC1956/ST4614-MSSA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LB315_RS11745 (2336772) | 2336772..2338037 | - | 1266 | WP_229373882.1 | lipid II:glycine glycyltransferase | - |
| LB315_RS11750 (2338426) | 2338426..2338677 | + | 252 | WP_001566779.1 | hypothetical protein | - |
| LB315_RS11755 (2338669) | 2338669..2339433 | - | 765 | WP_000600967.1 | VOC family protein | - |
| LB315_RS11760 (2339596) | 2339596..2340036 | + | 441 | WP_000951062.1 | winged helix DNA-binding protein | - |
| LB315_RS11765 (2340029) | 2340029..2340316 | + | 288 | Protein_2273 | MFS transporter | - |
| LB315_RS11770 (2340832) | 2340832..2341266 | - | 435 | WP_229373883.1 | Chemotaxis inhibitory protein | VF |
| LB315_RS11775 (2341574) | 2341574..2342068 | - | 495 | WP_229373884.1 | Staphylokinase | VF |
| LB315_RS11780 (2342177) | 2342177..2342932 | - | 756 | WP_229373885.1 | CHAP domain-containing protein | - |
| LB315_RS11785 (2342944) | 2342944..2343201 | - | 258 | WP_115211003.1 | phage holin | - |
| LB315_RS11790 (2343253) | 2343253..2343348 | + | 96 | Protein_2278 | hypothetical protein | - |
| - (2343282) | 2343282..2343375 | + | 94 | NuclAT_1 | - | Antitoxin Detail |
| - (2343282) | 2343282..2343375 | + | 94 | NuclAT_1 | - | Antitoxin Detail |
| - (2343282) | 2343282..2343375 | + | 94 | NuclAT_1 | - | Antitoxin Detail |
| - (2343282) | 2343282..2343375 | + | 94 | NuclAT_1 | - | Antitoxin Detail |
| LB315_RS11795 (2343404) | 2343404..2343508 | - | 105 | WP_229373886.1 | hypothetical protein | Toxin Detail |
| LB315_RS11800 (2343713) | 2343713..2344012 | - | 300 | WP_031797127.1 | DUF2951 family protein | - |
| LB315_RS11805 (2344058) | 2344058..2344222 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| LB315_RS11810 (2344215) | 2344215..2344604 | - | 390 | WP_229373887.1 | DUF2977 domain-containing protein | - |
| LB315_RS11815 (2344604) | 2344604..2346070 | - | 1467 | WP_229373888.1 | BppU family phage baseplate upper protein | - |
| LB315_RS11820 (2346070) | 2346070..2347980 | - | 1911 | WP_229373889.1 | hypothetical protein | - |
| LB315_RS11825 (2347996) | 2347996..2348286 | - | 291 | WP_000179864.1 | hypothetical protein | - |
| LB315_RS11830 (2348286) | 2348286..2349869 | - | 1584 | WP_229373890.1 | prophage endopeptidase tail family protein | - |
| LB315_RS11835 (2349878) | 2349878..2350702 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| LB315_RS11840 (2350702) | 2350702..2356953 | - | 6252 | WP_229373891.1 | phage tail tape measure protein | - |
| LB315_RS11845 (2356967) | 2356967..2357125 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| LB315_RS11850 (2357167) | 2357167..2357517 | - | 351 | WP_061736643.1 | hypothetical protein | - |
| LB315_RS11855 (2357575) | 2357575..2358030 | - | 456 | WP_229373892.1 | Ig-like domain-containing protein | - |
| LB315_RS11860 (2358122) | 2358122..2358763 | - | 642 | WP_000807542.1 | phage tail protein | - |
| LB315_RS11865 (2358798) | 2358798..2359193 | - | 396 | WP_229373893.1 | hypothetical protein | - |
| LB315_RS11870 (2359194) | 2359194..2359595 | - | 402 | WP_229373894.1 | hypothetical protein | - |
| LB315_RS11875 (2359592) | 2359592..2359924 | - | 333 | WP_229373895.1 | hypothetical protein | - |
| LB315_RS11880 (2359936) | 2359936..2360214 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| LB315_RS11885 (2360283) | 2360283..2361446 | - | 1164 | WP_229373896.1 | phage major capsid protein | - |
| LB315_RS11890 (2361458) | 2361458..2362231 | - | 774 | WP_229373897.1 | Clp protease ClpP | - |
| LB315_RS11895 (2362215) | 2362215..2363453 | - | 1239 | WP_229373898.1 | phage portal protein | - |
| LB315_RS11900 (2363458) | 2363458..2365149 | - | 1692 | WP_229373899.1 | terminase large subunit | - |
| LB315_RS11905 (2365139) | 2365139..2365444 | - | 306 | WP_000778935.1 | P27 family phage terminase small subunit | - |
| LB315_RS11910 (2365568) | 2365568..2365888 | - | 321 | WP_000160691.1 | HNH endonuclease signature motif containing protein | - |
| LB315_RS11915 (2366014) | 2366014..2366448 | - | 435 | WP_115211362.1 | hypothetical protein | - |
| LB315_RS11920 (2366462) | 2366462..2367829 | - | 1368 | WP_229373900.1 | DEAD/DEAH box helicase | - |
| LB315_RS11925 (2367810) | 2367810..2368100 | - | 291 | WP_229373672.1 | VRR-NUC domain-containing protein | - |
| LB315_RS11930 (2368234) | 2368234..2368338 | + | 105 | WP_229373901.1 | hypothetical protein | - |
| LB315_RS11935 (2368441) | 2368441..2370897 | - | 2457 | WP_229373902.1 | virulence-associated E family protein | - |
| LB315_RS11940 (2370950) | 2370950..2371150 | - | 201 | WP_229373676.1 | DUF1514 family protein | - |
| LB315_RS11945 (2371219) | 2371219..2371371 | - | 153 | WP_229373903.1 | transcriptional activator RinB | - |
| LB315_RS11950 (2371368) | 2371368..2371754 | - | 387 | WP_229373904.1 | DUF1523 family protein | - |
| LB315_RS11955 (2371775) | 2371775..2371942 | - | 168 | WP_229373905.1 | hypothetical protein | - |
| LB315_RS11960 (2371958) | 2371958..2372155 | - | 198 | WP_229373906.1 | DUF1381 domain-containing protein | - |
| LB315_RS11965 (2372192) | 2372192..2372728 | - | 537 | WP_229373907.1 | dUTP diphosphatase | - |
| LB315_RS11970 (2372721) | 2372721..2372969 | - | 249 | WP_229373908.1 | DUF1024 family protein | - |
| LB315_RS11975 (2372962) | 2372962..2373327 | - | 366 | WP_229373909.1 | acetyltransferase | - |
| LB315_RS11980 (2373324) | 2373324..2373710 | - | 387 | WP_229373910.1 | hypothetical protein | - |
| LB315_RS11985 (2373724) | 2373724..2373966 | - | 243 | WP_229373911.1 | phi PVL orf 51-like protein | - |
| LB315_RS11990 (2373970) | 2373970..2374326 | - | 357 | WP_115211371.1 | SA1788 family PVL leukocidin-associated protein | - |
| LB315_RS11995 (2374454) | 2374454..2374759 | - | 306 | WP_229373912.1 | hypothetical protein | - |
| LB315_RS12000 (2374760) | 2374760..2374945 | - | 186 | WP_229373913.1 | DUF3113 family protein | - |
| LB315_RS12005 (2375050) | 2375050..2377002 | - | 1953 | WP_229373914.1 | DNA polymerase | - |
| LB315_RS12010 (2377072) | 2377072..2377626 | - | 555 | WP_000647288.1 | DUF2815 family protein | - |
| LB315_RS12015 (2377658) | 2377658..2377918 | - | 261 | WP_229373915.1 | helix-turn-helix transcriptional regulator | - |
| LB315_RS12020 (2377932) | 2377932..2379098 | - | 1167 | WP_229373916.1 | DUF2800 domain-containing protein | - |
| LB315_RS12025 (2379095) | 2379095..2379457 | - | 363 | WP_229373917.1 | hypothetical protein | - |
| LB315_RS12030 (2379472) | 2379472..2379795 | - | 324 | WP_229373918.1 | TrmB family transcriptional regulator | - |
| LB315_RS12035 (2379876) | 2379876..2380037 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| LB315_RS12040 (2380049) | 2380049..2380312 | - | 264 | WP_229373919.1 | helix-turn-helix domain-containing protein | - |
| LB315_RS12045 (2380390) | 2380390..2380587 | - | 198 | WP_229373920.1 | hypothetical protein | - |
| LB315_RS12050 (2380644) | 2380644..2380973 | + | 330 | WP_229373921.1 | hypothetical protein | - |
| LB315_RS12055 (2380962) | 2380962..2381180 | - | 219 | WP_229373922.1 | DUF2829 domain-containing protein | - |
| LB315_RS12060 (2381239) | 2381239..2381469 | + | 231 | WP_229373923.1 | hypothetical protein | - |
| LB315_RS12065 (2381466) | 2381466..2381642 | - | 177 | WP_015994739.1 | hypothetical protein | - |
| LB315_RS12070 (2381655) | 2381655..2382431 | - | 777 | WP_229373924.1 | phage antirepressor KilAC domain-containing protein | - |
| LB315_RS12075 (2382454) | 2382454..2382681 | - | 228 | WP_229373925.1 | helix-turn-helix transcriptional regulator | - |
| LB315_RS12080 (2382835) | 2382835..2383467 | + | 633 | WP_229373926.1 | XRE family transcriptional regulator | - |
| LB315_RS12085 (2383483) | 2383483..2384403 | + | 921 | WP_229373927.1 | exonuclease domain-containing protein | - |
| LB315_RS12090 (2384507) | 2384507..2384698 | + | 192 | WP_115211192.1 | hypothetical protein | - |
| LB315_RS12095 (2384695) | 2384695..2384985 | - | 291 | WP_229373928.1 | hypothetical protein | - |
| LB315_RS12100 (2385386) | 2385386..2386591 | + | 1206 | WP_229374831.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LB315_RS12105 (2386689) | 2386689..2387627 | + | 939 | Protein_2341 | MFS transporter | - |
| LB315_RS12110 (2387729) | 2387729..2388079 | - | 351 | WP_000066900.1 | HTH-type transcriptional regulator SarV | - |
| LB315_RS12115 (2388205) | 2388205..2388375 | + | 171 | WP_031927354.1 | hypothetical protein | - |
| LB315_RS12120 (2388655) | 2388655..2389677 | - | 1023 | WP_000230173.1 | GTP 3',8-cyclase MoaA | - |
| LB315_RS12125 (2389697) | 2389697..2390296 | - | 600 | WP_229373929.1 | molybdenum cofactor guanylyltransferase MobA | - |
| LB315_RS12130 (2390303) | 2390303..2390536 | - | 234 | WP_000866971.1 | molybdopterin converting factor subunit 1 | - |
| LB315_RS12135 (2390542) | 2390542..2390988 | - | 447 | WP_000808500.1 | molybdenum cofactor biosynthesis protein MoaE | - |
| LB315_RS12140 (2391002) | 2391002..2391487 | - | 486 | WP_229373930.1 | molybdopterin-guanine dinucleotide biosynthesis protein B | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|