MGE detailed information
MGE type: Prophage MGE length: 91447 bp
Accession: NZ_CP084879 Location: 2131847..2223293 Organism: Shigella flexneri strain CMCC51574 Replicon: chromosome
Accession: NZ_CP084879 Location: 2131847..2223293 Organism: Shigella flexneri strain CMCC51574 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGV73_RS10835 () | 2127247..2128212 | + | 966 | WP_005049759.1 | L-Ala-D/L-Glu epimerase | - |
| LGV73_RS10840 () | 2128187..2128915 | - | 729 | WP_005061999.1 | murein tripeptide amidase MpaA | - |
| LGV73_RS10845 () | 2129206..2129844 | - | 639 | WP_005049763.1 | SDR family oxidoreductase | - |
| LGV73_RS10850 () | 2129862..2130443 | - | 582 | Protein_2122 | alpha/beta hydrolase | - |
| LGV73_RS10855 () | 2130672..2131868 | + | 1197 | WP_005107451.1 | IS110-like element ISSfl4 family transposase | - |
| LGV73_RS10860 () | 2131895..2132907 | - | 1013 | Protein_2124 | IS3 family transposase IS2 | Transposase |
| LGV73_RS10865 () | 2133431..2133600 | + | 170 | Protein_2125 | hypothetical protein | - |
| LGV73_RS10870 () | 2133746..2134492 | + | 747 | WP_128861108.1 | ATP-binding protein | - |
| LGV73_RS10875 () | 2134507..2134929 | + | 423 | WP_001118167.1 | DUF977 family protein | - |
| LGV73_RS10880 () | 2134987..2135343 | + | 357 | WP_005048249.1 | hypothetical protein | - |
| LGV73_RS10885 () | 2135436..2135654 | + | 219 | WP_000256998.1 | DUF4014 family protein | - |
| LGV73_RS10890 () | 2135656..2136021 | + | 366 | WP_001229298.1 | HNH endonuclease signature motif containing protein | - |
| LGV73_RS10895 () | 2136018..2136683 | + | 666 | WP_000208062.1 | hypothetical protein | - |
| LGV73_RS10900 () | 2136683..2137048 | + | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| - | 2137433..2137491 | - | 59 | - | - | Antitoxin Detail |
| LGV73_RS10905 () | 2137503..2137658 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| LGV73_RS10915 () | 2138995..2139594 | + | 600 | WP_000940329.1 | DUF1367 family protein | - |
| LGV73_RS10920 () | 2139594..2139884 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| LGV73_RS10925 () | 2139881..2140435 | + | 555 | WP_000640143.1 | DUF1133 family protein | - |
| LGV73_RS10930 () | 2140588..2140761 | + | 174 | WP_000504450.1 | hypothetical protein | - |
| LGV73_RS10935 () | 2140823..2141979 | + | 1157 | WP_094081550.1 | IS3 family transposase IS600 | Transposase |
| LGV73_RS10940 () | 2141972..2142532 | + | 561 | WP_072075205.1 | ORF6N domain-containing protein | - |
| LGV73_RS10965 () | 2143166..2144770 | + | 1605 | WP_064751757.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LGV73_RS10970 () | 2145664..2145852 | + | 189 | Protein_2142 | Rha family transcriptional regulator | - |
| LGV73_RS10975 () | 2145911..2146608 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| LGV73_RS10980 () | 2146624..2147529 | + | 906 | Protein_2144 | IS3 family transposase IS600 | Transposase |
| LGV73_RS10985 () | 2147557..2147925 | + | 369 | WP_011069357.1 | hypothetical protein | - |
| LGV73_RS10990 () | 2147949..2148493 | + | 545 | Protein_2146 | tail fiber assembly protein | - |
| LGV73_RS10995 () | 2148517..2149702 | + | 1186 | Protein_2147 | prophage tail fiber N-terminal domain-containing protein | - |
| LGV73_RS11000 () | 2149653..2150277 | + | 625 | Protein_2148 | DUF4376 domain-containing protein | - |
| LGV73_RS11005 () | 2150478..2151335 | - | 858 | WP_000968134.1 | hypothetical protein | ARG |
| LGV73_RS11010 () | 2151332..2152189 | - | 858 | WP_001101728.1 | hypothetical protein | ARG |
| LGV73_RS11015 () | 2152186..2153013 | - | 828 | WP_000983722.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LGV73_RS11020 () | 2153013..2153927 | - | 915 | WP_000555620.1 | hypothetical protein | VF |
| LGV73_RS11025 () | 2154389..2155030 | - | 642 | Protein_2153 | hypothetical protein ; Integrase | Integrase |
| LGV73_RS11030 () | 2155084..2155781 | + | 698 | WP_272606668.1 | IS1 family transposase IS1X2 | Transposase |
| LGV73_RS11035 () | 2155798..2155968 | - | 171 | Protein_2155 | DUF3596 domain-containing protein | - |
| LGV73_RS11040 () | 2155970..2156137 | - | 168 | WP_005049823.1 | excisionase family protein | - |
| LGV73_RS11045 () | 2156185..2157239 | - | 1055 | Protein_2157 | IS3 family transposase IS629 | Transposase |
| LGV73_RS11050 () | 2157265..2158425 | - | 1161 | WP_005107813.1 | AAA family ATPase | - |
| LGV73_RS11060 () | 2159635..2159943 | - | 309 | WP_232046049.1 | host-nuclease inhibitor Gam family protein | - |
| LGV73_RS11065 () | 2160042..2161198 | + | 1157 | WP_094190485.1 | IS3 family transposase IS600 | Transposase |
| LGV73_RS11070 () | 2161255..2162670 | - | 1416 | Protein_2162 | exodeoxyribonuclease VIII | - |
| LGV73_RS11075 () | 2162770..2163045 | - | 276 | WP_005049830.1 | hypothetical protein | - |
| LGV73_RS11080 () | 2163120..2163290 | - | 171 | WP_001359121.1 | YdaE family protein | - |
| LGV73_RS11085 () | 2163290..2163511 | - | 222 | WP_000560226.1 | killing protein KilR | - |
| LGV73_RS11095 () | 2164858..2165746 | - | 889 | Protein_2167 | Rha family transcriptional regulator | - |
| LGV73_RS11100 () | 2166223..2166459 | + | 237 | WP_001275006.1 | hypothetical protein | - |
| LGV73_RS11105 () | 2166660..2167040 | + | 381 | Protein_2169 | IS66 family transposase ISSfl3 | Transposase |
| LGV73_RS11110 () | 2167042..2167209 | + | 168 | Protein_2170 | IS66 family transposase ISSfl3 | Transposase |
| LGV73_RS11115 () | 2167160..2167783 | + | 624 | WP_000930142.1 | DUF4376 domain-containing protein | - |
| LGV73_RS11120 () | 2167963..2169678 | - | 1716 | WP_128571583.1 | hypothetical protein | VF |
| LGV73_RS11125 () | 2170420..2170866 | + | 447 | Protein_2173 | metallophosphoesterase | - |
| LGV73_RS11130 () | 2170931..2172087 | + | 1157 | WP_094105050.1 | IS3 family transposase IS600 | Transposase |
| LGV73_RS11135 () | 2172131..2172319 | + | 189 | Protein_2175 | serine/threonine-protein phosphatase | - |
| LGV73_RS11140 () | 2172344..2172535 | - | 192 | WP_001296140.1 | YebW family protein | - |
| LGV73_RS11145 () | 2172640..2172876 | - | 237 | WP_001295499.1 | YebV family protein | - |
| LGV73_RS11150 () | 2172994..2174433 | - | 1440 | WP_000057029.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LGV73_RS11155 () | 2174513..2177133 | - | 2621 | Protein_2179 | hypothetical protein | VF |
| LGV73_RS11160 () | 2177102..2178385 | - | 1284 | Protein_2180 | membrane integrity lipid transport subunit YebS | - |
| LGV73_RS11165 () | 2178515..2179012 | + | 498 | WP_001043881.1 | L-methionine (R)-S-oxide reductase | - |
| LGV73_RS11170 () | 2179109..2179807 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| LGV73_RS11175 () | 2179827..2181875 | + | 2049 | WP_001055799.1 | carboxy terminal-processing peptidase | - |
| LGV73_RS11180 () | 2182067..2182948 | + | 882 | WP_000984517.1 | protease HtpX | - |
| LGV73_RS11185 () | 2182994..2184367 | - | 1374 | WP_001127218.1 | MFS transporter | - |
| LGV73_RS11190 () | 2184544..2185335 | + | 792 | WP_001262181.1 | DNA-binding transcriptional regulator KdgR | - |
| LGV73_RS11195 () | 2185478..2185717 | - | 240 | WP_001211010.1 | YobH family protein | - |
| LGV73_RS11200 () | 2185876..2186019 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| LGV73_RS11205 () | 2186094..2186381 | + | 288 | WP_001006860.1 | YebO family protein | - |
| LGV73_RS11210 () | 2187051..2187194 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| LGV73_RS11215 () | 2187207..2187416 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LGV73_RS11220 () | 2187582..2188391 | + | 810 | WP_000010128.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LGV73_RS11225 () | 2188388..2188954 | - | 567 | WP_001668667.1 | manganese efflux pump MntP | - |
| LGV73_RS11230 () | 2189417..2190115 | - | 699 | WP_272606669.1 | IS1 family transposase IS1X2 | Transposase |
| LGV73_RS11235 () | 2190144..2190620 | - | 477 | WP_000156246.1 | DUF986 family protein | - |
| LGV73_RS11240 () | 2190675..2191526 | - | 852 | WP_001331209.1 | PTS mannose transporter subunit IID | - |
| LGV73_RS11245 () | 2191539..2192339 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| LGV73_RS11250 () | 2192402..2193373 | - | 972 | WP_000150543.1 | PTS mannose transporter subunit IIAB | - |
| LGV73_RS11255 () | 2193690..2193848 | + | 159 | WP_001327808.1 | protein YoaL | - |
| LGV73_RS11260 () | 2193836..2195386 | + | 1551 | WP_000394975.1 | CNNM family cation transport protein YoaE | - |
| LGV73_RS11265 () | 2195390..2196988 | - | 1599 | WP_272606670.1 | hypothetical protein | VF |
| LGV73_RS11270 () | 2197119..2198483 | - | 1365 | WP_000624314.1 | L-serine ammonia-lyase | - |
| LGV73_RS11275 () | 2198667..2199245 | - | 579 | WP_000456709.1 | CoA pyrophosphatase | - |
| LGV73_RS11280 () | 2199249..2200610 | - | 1362 | WP_000855039.1 | aminodeoxychorismate synthase component 1 | - |
| LGV73_RS11285 () | 2200684..2200863 | + | 180 | WP_000457325.1 | YoaH family protein | - |
| LGV73_RS11290 () | 2200983..2201282 | - | 300 | WP_001111995.1 | DUF1889 family protein | - |
| LGV73_RS11295 () | 2201617..2202314 | + | 698 | WP_272606671.1 | IS1 family transposase IS1X2 | Transposase |
| LGV73_RS11300 () | 2202481..2202825 | - | 345 | WP_001295493.1 | RidA family protein | - |
| LGV73_RS11305 () | 2202957..2204867 | + | 1911 | WP_000128851.1 | ATP-dependent DNA helicase | - |
| LGV73_RS11310 () | 2204925..2205620 | + | 696 | WP_001220997.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| LGV73_RS11315 () | 2205660..2206241 | + | 582 | WP_000290576.1 | Slp family lipoprotein YeaY | - |
| LGV73_RS11320 () | 2206446..2208131 | + | 1686 | WP_005107553.1 | long-chain-fatty-acid--CoA ligase FadD | - |
| LGV73_RS11325 () | 2208213..2209328 | + | 1116 | WP_005049885.1 | ribonuclease D | - |
| LGV73_RS11330 () | 2209382..2210347 | - | 966 | WP_272606672.1 | carnitine monooxygenase subunit YeaX | - |
| LGV73_RS11335 () | 2210403..2211020 | - | 618 | Protein_2215 | carnitine monooxygenase subunit YeaW | - |
| LGV73_RS11340 () | 2211362..2211970 | - | 609 | WP_272606673.1 | helix-turn-helix transcriptional regulator | - |
| LGV73_RS11345 () | 2212295..2213451 | + | 1157 | WP_094105050.1 | IS3 family transposase IS600 | Transposase |
| LGV73_RS11350 () | 2213518..2213634 | + | 117 | WP_071829131.1 | helix-turn-helix domain-containing protein | - |
| LGV73_RS11355 () | 2213628..2214005 | + | 378 | Protein_2219 | DNA-binding protein | - |
| LGV73_RS11360 () | 2214166..2214240 | - | 75 | WP_001386836.1 | protein YoaJ | - |
| LGV73_RS11365 () | 2214243..2214341 | - | 99 | WP_032155854.1 | YoaK family small membrane protein | - |
| LGV73_RS11370 () | 2214374..2215399 | - | 1026 | WP_005049892.1 | diguanylate cyclase DgcP | - |
| LGV73_RS11375 () | 2215582..2215836 | + | 255 | WP_000691930.1 | DUF333 domain-containing lipoprotein YoaF | - |
| LGV73_RS11380 () | 2215858..2216205 | - | 348 | WP_005049895.1 | DUF488 domain-containing protein | - |
| LGV73_RS11385 () | 2216260..2217440 | - | 1181 | Protein_2225 | 2-nitroimidazole transporter | - |
| LGV73_RS11390 () | 2217537..2218355 | + | 819 | Protein_2226 | HTH-type transcriptional activator RhaS | VF |
| LGV73_RS11395 () | 2218312..2218758 | - | 447 | WP_000460707.1 | DUF441 domain-containing protein | - |
| LGV73_RS11400 () | 2218928..2219032 | + | 105 | WP_000999629.1 | small membrane protein YoaI | - |
| LGV73_RS11405 () | 2219033..2219536 | - | 504 | WP_119172918.1 | mischarged aminoacyl-tRNA deacylase | - |
| LGV73_RS11410 () | 2219579..2220682 | - | 1104 | WP_000111978.1 | GAPES1 domain-containing protein | - |
| LGV73_RS11415 () | 2220721..2221877 | + | 1157 | WP_094081550.1 | IS3 family transposase IS600 | Transposase |
| LGV73_RS11420 () | 2221905..2223293 | - | 1389 | Protein_2232 | protein kinase YeaG | - |
| LGV73_RS11425 () | 2223729..2224475 | + | 747 | WP_000163771.1 | scaffolding protein MipA | - |
| LGV73_RS11430 () | 2224565..2225326 | + | 762 | WP_001186355.1 | aldo/keto reductase | - |
| LGV73_RS11435 () | 2225377..2226261 | - | 885 | WP_001343163.1 | D-hexose-6-phosphate mutarotase | - |
| LGV73_RS11440 () | 2226345..2227340 | - | 996 | WP_000153502.1 | glyceraldehyde-3-phosphate dehydrogenase | - |
| LGV73_RS11445 () | 2227682..2228095 | + | 414 | WP_001284613.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|