MGE detailed information
MGE type: Prophage MGE length: 52685 bp
Accession: NZ_CP084879 Location: 1464212..1516896 Organism: Shigella flexneri strain CMCC51574 Replicon: chromosome
Accession: NZ_CP084879 Location: 1464212..1516896 Organism: Shigella flexneri strain CMCC51574 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGV73_RS07375 (1460275) | 1460275..1461708 | + | 1434 | WP_001036463.1 | anion permease | - |
| LGV73_RS07380 (1461891) | 1461891..1464071 | + | 2181 | WP_000593940.1 | hydratase | - |
| LGV73_RS07385 (1464212) | 1464212..1465495 | - | 1284 | WP_001091541.1 | putative acyl-CoA thioester hydrolase | - |
| LGV73_RS07390 (1465698) | 1465698..1466866 | - | 1169 | Protein_1443 | IS3 family transposase ISLad1 | Transposase |
| LGV73_RS07395 (1466976) | 1466976..1467140 | + | 165 | WP_128863664.1 | lysis system o-spanin lipoprotein Rz1 | - |
| LGV73_RS07400 (1467273) | 1467273..1467785 | - | 513 | WP_011069285.1 | VTT domain-containing protein | - |
| LGV73_RS07405 (1467980) | 1467980..1468744 | + | 765 | WP_001108106.1 | hypothetical protein | - |
| LGV73_RS07410 (1468695) | 1468695..1469363 | + | 669 | Protein_1447 | PBSX family phage terminase large subunit | - |
| LGV73_RS07415 (1469454) | 1469454..1469944 | + | 491 | Protein_1448 | IS3 family transposase IS2 | Transposase |
| LGV73_RS07420 (1470024) | 1470024..1471192 | + | 1169 | WP_272606654.1 | IS3 family transposase ISLad1 | Transposase |
| LGV73_RS07425 (1471203) | 1471203..1471643 | + | 441 | Protein_1450 | DUF1133 family protein | - |
| LGV73_RS07450 (1472823) | 1472823..1472909 | + | 87 | Protein_1451 | phage holin | - |
| LGV73_RS07460 (1474137) | 1474137..1474253 | + | 117 | Protein_1453 | helix-turn-helix domain-containing protein | - |
| LGV73_RS07465 (1474361) | 1474361..1475650 | + | 1290 | Protein_1454 | toprim domain-containing protein | - |
| LGV73_RS07470 (1475713) | 1475713..1476869 | + | 1157 | WP_094105672.1 | IS3 family transposase IS600 | Transposase |
| LGV73_RS07475 (1476913) | 1476913..1477092 | - | 180 | Protein_1456 | Rha family transcriptional regulator | - |
| LGV73_RS07480 (1477295) | 1477295..1477762 | - | 468 | WP_000092287.1 | lysis protein | - |
| LGV73_RS07485 (1477759) | 1477759..1478292 | - | 534 | WP_001274722.1 | lysozyme | - |
| LGV73_RS07490 (1478358) | 1478358..1478987 | - | 630 | WP_005083349.1 | hypothetical protein | - |
| LGV73_RS07495 (1478991) | 1478991..1479206 | - | 216 | WP_000839566.1 | class II holin family protein | - |
| LGV73_RS07520 (1480009) | 1480009..1480389 | - | 381 | WP_001204832.1 | antiterminator Q family protein | - |
| LGV73_RS07525 (1480382) | 1480382..1480582 | - | 201 | WP_000111769.1 | protein ninH | - |
| LGV73_RS07530 (1480677) | 1480677..1480934 | - | 258 | WP_001064799.1 | hypothetical protein | - |
| LGV73_RS07535 (1480931) | 1480931..1482322 | - | 1392 | WP_000211324.1 | replicative DNA helicase | - |
| LGV73_RS07540 (1482319) | 1482319..1483197 | - | 879 | WP_000988183.1 | ATP-binding protein | - |
| LGV73_RS07545 (1483208) | 1483208..1484116 | - | 909 | WP_001247840.1 | hypothetical protein | - |
| LGV73_RS07550 (1484103) | 1484103..1484336 | - | 234 | WP_000618004.1 | hypothetical protein | - |
| LGV73_RS07555 (1484333) | 1484333..1484785 | - | 453 | WP_232046050.1 | Rha family transcriptional regulator | - |
| LGV73_RS07560 (1484843) | 1484843..1485301 | - | 459 | WP_000961311.1 | ash family protein | - |
| LGV73_RS07565 (1485314) | 1485314..1485544 | + | 231 | WP_005061113.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGV73_RS07570 (1485534) | 1485534..1485842 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| LGV73_RS07575 (1485884) | 1485884..1486060 | - | 177 | WP_024260406.1 | NinE family protein | - |
| LGV73_RS07580 (1486057) | 1486057..1486467 | - | 411 | WP_000814621.1 | recombination protein NinB | - |
| LGV73_RS07585 (1486464) | 1486464..1486742 | - | 279 | WP_005061104.1 | hypothetical protein | - |
| LGV73_RS07590 (1486817) | 1486817..1487584 | - | 768 | Protein_1475 | hypothetical protein | - |
| LGV73_RS07600 (1489134) | 1489134..1489688 | - | 555 | Protein_1477 | hypothetical protein | - |
| LGV73_RS07610 (1491021) | 1491021..1491374 | + | 354 | WP_000439005.1 | hypothetical protein | - |
| LGV73_RS07615 (1491682) | 1491682..1491858 | - | 177 | WP_001205133.1 | hypothetical protein | - |
| LGV73_RS07620 (1492255) | 1492255..1492467 | + | 213 | WP_005107083.1 | hypothetical protein | - |
| LGV73_RS07625 (1492524) | 1492524..1492643 | + | 120 | Protein_1482 | IS3 family transposase ISSfl10 | Transposase |
| LGV73_RS07630 (1492685) | 1492685..1493894 | - | 1210 | Protein_1483 | IS3 family transposase IS629 | Transposase |
| LGV73_RS07635 (1493950) | 1493950..1494989 | + | 1040 | Protein_1484 | IS3 family transposase IS600 | Transposase |
| LGV73_RS07640 (1495032) | 1495032..1495340 | + | 309 | Protein_1485 | terminase small subunit | - |
| LGV73_RS07645 (1495312) | 1495312..1497240 | + | 1929 | WP_001026848.1 | phage terminase large subunit family protein | - |
| LGV73_RS07650 (1497224) | 1497224..1497427 | + | 204 | WP_000259004.1 | gpW family head-tail joining protein | - |
| LGV73_RS07655 (1497424) | 1497424..1499017 | + | 1594 | Protein_1488 | phage portal protein | - |
| LGV73_RS07660 (1499007) | 1499007..1500512 | + | 1506 | WP_075332558.1 | S49 family peptidase | - |
| LGV73_RS07665 (1500549) | 1500549..1500896 | + | 348 | WP_000256830.1 | head decoration protein | - |
| LGV73_RS07670 (1500954) | 1500954..1501982 | + | 1029 | WP_000522637.1 | major capsid protein | - |
| LGV73_RS07675 (1502034) | 1502034..1502420 | + | 387 | WP_000201488.1 | DNA-packaging protein FI | - |
| LGV73_RS07680 (1502432) | 1502432..1502809 | + | 378 | WP_000348593.1 | head-tail joining protein | - |
| LGV73_RS07685 (1502796) | 1502796..1503380 | + | 585 | WP_000677140.1 | phage tail protein | - |
| LGV73_RS07690 (1503377) | 1503377..1503778 | + | 402 | WP_001079406.1 | phage minor tail U family protein | - |
| LGV73_RS07695 (1503789) | 1503789..1504529 | + | 741 | WP_000211126.1 | phage tail tube protein | - |
| LGV73_RS07700 (1504588) | 1504588..1504974 | + | 387 | WP_000478927.1 | phage minor tail protein G | - |
| LGV73_RS07705 (1504983) | 1504983..1505312 | + | 330 | WP_001161004.1 | phage tail assembly protein T | - |
| LGV73_RS07710 (1505284) | 1505284..1508326 | + | 3043 | Protein_1499 | phage tail tape measure protein | - |
| LGV73_RS07715 (1508326) | 1508326..1508655 | + | 330 | WP_000447264.1 | phage tail protein | - |
| LGV73_RS07720 (1508655) | 1508655..1509353 | + | 699 | WP_272606564.1 | phage minor tail protein L | - |
| LGV73_RS07725 (1509358) | 1509358..1510101 | + | 744 | WP_000194737.1 | C40 family peptidase | - |
| LGV73_RS07730 (1510065) | 1510065..1510640 | + | 576 | WP_005105520.1 | tail assembly protein | - |
| LGV73_RS07735 (1510701) | 1510701..1514180 | + | 3480 | WP_272606563.1 | host specificity protein J | - |
| LGV73_RS07740 (1514248) | 1514248..1514847 | + | 600 | WP_001230368.1 | hypothetical protein | VF |
| LGV73_RS07745 (1514911) | 1514911..1516322 | + | 1412 | Protein_1506 | prophage tail fiber N-terminal domain-containing protein | - |
| LGV73_RS07750 (1516273) | 1516273..1516896 | + | 624 | WP_000930145.1 | DUF4376 domain-containing protein | - |
| LGV73_RS07755 (1517076) | 1517076..1518839 | - | 1764 | WP_000801162.1 | NEL-type E3 ubiquitin ligase domain-containing protein | - |
| LGV73_RS07760 (1518931) | 1518931..1519017 | + | 87 | Protein_1509 | transposase | - |
| LGV73_RS07765 (1519027) | 1519027..1519107 | - | 81 | Protein_1510 | hypothetical protein | - |
| LGV73_RS07770 (1519422) | 1519422..1519898 | - | 477 | WP_000767391.1 | kinase inhibitor | - |
| LGV73_RS07775 (1519957) | 1519957..1521246 | - | 1290 | WP_024260402.1 | adenosylmethionine--8-amino-7-oxononanoate transaminase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|