MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94734 bp
Accession: NZ_CP084775 Location: 1..94734 Organism: Klebsiella quasipneumoniae subsp. similipneumoniae strain SB610 Replicon: plasmid pKqs_SB610_5
Accession: NZ_CP084775 Location: 1..94734 Organism: Klebsiella quasipneumoniae subsp. similipneumoniae strain SB610 Replicon: plasmid pKqs_SB610_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM29_RS28745 (LGM29_28745) | 557..1315 | + | 759 | Protein_1 | ISNCY family transposase ISKpn21 | Transposase |
| LGM29_RS28750 (LGM29_28750) | 1453..2316 | - | 864 | WP_226550247.1 | toll/interleukin-1 receptor domain-containing protein | - |
| LGM29_RS28755 (LGM29_28755) | 2333..2758 | - | 426 | WP_226550249.1 | hypothetical protein | - |
| LGM29_RS28760 (LGM29_28760) | 2997..3293 | - | 297 | WP_226550251.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LGM29_RS28765 (LGM29_28765) | 3280..3540 | - | 261 | WP_007374405.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LGM29_RS28770 (LGM29_28770) | 3802..4104 | + | 303 | WP_226550253.1 | hypothetical protein | - |
| LGM29_RS28775 (LGM29_28775) | 4101..5348 | + | 1248 | WP_136048947.1 | hypothetical protein | - |
| LGM29_RS28780 (LGM29_28780) | 5535..6383 | + | 849 | WP_136048948.1 | 3'-5' exonuclease | - |
| LGM29_RS28785 (LGM29_28785) | 6453..7571 | - | 1119 | WP_136048949.1 | acyltransferase | - |
| LGM29_RS28790 (LGM29_28790) | 7917..8399 | + | 483 | WP_226550259.1 | Phospholipase D | VF |
| LGM29_RS28795 (LGM29_28795) | 8440..8808 | + | 369 | WP_136048951.1 | hypothetical protein | - |
| LGM29_RS28800 (LGM29_28800) | 8829..9026 | + | 198 | WP_136048952.1 | hypothetical protein | - |
| LGM29_RS28805 (LGM29_28805) | 9239..9922 | + | 684 | WP_136048953.1 | SOS response-associated peptidase family protein | - |
| LGM29_RS28810 (LGM29_28810) | 10361..11386 | + | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| LGM29_RS28815 (LGM29_28815) | 11681..12649 | + | 969 | WP_072199635.1 | IS5 family transposase IS903B | Transposase |
| LGM29_RS28820 (LGM29_28820) | 12968..13993 | - | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| LGM29_RS28825 (LGM29_28825) | 14529..15305 | + | 777 | WP_226550255.1 | TraX family protein | - |
| LGM29_RS28830 (LGM29_28830) | 15370..15834 | + | 465 | WP_136048955.1 | hypothetical protein | - |
| LGM29_RS28835 (LGM29_28835) | 15860..16081 | - | 222 | WP_136048958.1 | hypothetical protein | - |
| LGM29_RS28840 (LGM29_28840) | 16065..16718 | - | 654 | WP_136048956.1 | hypothetical protein | - |
| LGM29_RS28845 (LGM29_28845) | 17098..17796 | - | 699 | WP_000942288.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| LGM29_RS28850 (LGM29_28850) | 17799..18590 | - | 792 | WP_000130751.1 | urea ABC transporter ATP-binding protein UrtD | - |
| LGM29_RS28855 (LGM29_28855) | 18583..19659 | - | 1077 | WP_000081957.1 | urea ABC transporter permease subunit UrtC | - |
| LGM29_RS28860 (LGM29_28860) | 19659..21233 | - | 1575 | WP_000689172.1 | urea ABC transporter permease subunit UrtB | - |
| LGM29_RS28865 (LGM29_28865) | 21327..22598 | - | 1272 | WP_007371800.1 | urea ABC transporter substrate-binding protein | - |
| LGM29_RS28870 (LGM29_28870) | 22664..23365 | - | 702 | WP_136049090.1 | GntR family transcriptional regulator | - |
| LGM29_RS28875 (LGM29_28875) | 23375..26989 | - | 3615 | WP_000483515.1 | urea carboxylase | - |
| LGM29_RS28880 (LGM29_28880) | 26982..28781 | - | 1800 | WP_136049089.1 | Allophanate hydrolase | VF |
| LGM29_RS28885 (LGM29_28885) | 29249..29680 | - | 432 | WP_136049088.1 | hypothetical protein | - |
| LGM29_RS28890 (LGM29_28890) | 29727..30764 | + | 1038 | WP_136049087.1 | HoxN/HupN/NixA family nickel/cobalt transporter | - |
| LGM29_RS28895 (LGM29_28895) | 31390..31866 | - | 477 | Protein_31 | IS110-like element IS4321 family transposase | - |
| LGM29_RS28900 (LGM29_28900) | 31897..32601 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS28905 (LGM29_28905) | 32992..33759 | - | 768 | WP_075809031.1 | hypothetical protein | - |
| LGM29_RS28910 (LGM29_28910) | 33806..34216 | - | 411 | WP_060415454.1 | DUF1380 family protein | - |
| LGM29_RS28915 (LGM29_28915) | 34262..34483 | - | 222 | WP_020804418.1 | hypothetical protein | - |
| LGM29_RS28920 (LGM29_28920) | 34483..35184 | - | 702 | WP_075808998.1 | DNA methylase | - |
| LGM29_RS28925 (LGM29_28925) | 35256..35450 | - | 195 | Protein_37 | hypothetical protein | - |
| LGM29_RS28930 (LGM29_28930) | 35621..35851 | - | 231 | WP_075808997.1 | hypothetical protein | - |
| LGM29_RS28935 (LGM29_28935) | 36060..36485 | + | 426 | WP_032743916.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LGM29_RS28940 (LGM29_28940) | 36545..37132 | + | 588 | Protein_40 | DUF4113 domain-containing protein | - |
| LGM29_RS28945 (LGM29_28945) | 37355..37981 | + | 627 | WP_023304044.1 | ParA family plasmid-partitioning AAA ATPase | - |
| LGM29_RS28950 (LGM29_28950) | 37978..38280 | + | 303 | WP_071847026.1 | hypothetical protein | - |
| LGM29_RS28955 (LGM29_28955) | 38536..39009 | + | 474 | WP_023304043.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LGM29_RS28960 (LGM29_28960) | 40135..41297 | + | 1163 | WP_087759146.1 | IS3 family transposase ISPeat2 | Transposase |
| LGM29_RS28965 (LGM29_28965) | 41586..42551 | + | 966 | WP_023304042.1 | Recombination-promoting nuclease RpnA | VF |
| LGM29_RS28970 (LGM29_28970) | 42696..43472 | - | 777 | WP_023304041.1 | site-specific integrase | - |
| LGM29_RS28975 (LGM29_28975) | 43523..44293 | - | 771 | WP_001499400.1 | hypothetical protein | - |
| LGM29_RS28980 (LGM29_28980) | 44355..44774 | - | 420 | WP_224253935.1 | hypothetical protein | - |
| LGM29_RS28985 (LGM29_28985) | 45244..45507 | + | 264 | WP_004118691.1 | hypothetical protein | - |
| LGM29_RS28990 (LGM29_28990) | 45504..46070 | + | 567 | WP_202707995.1 | hypothetical protein | - |
| LGM29_RS28995 (LGM29_28995) | 46101..46595 | + | 495 | WP_202707993.1 | DNA-binding protein | - |
| LGM29_RS29000 (LGM29_29000) | 46639..47007 | + | 369 | WP_015344965.1 | hypothetical protein | - |
| LGM29_RS29005 (LGM29_29005) | 47041..47244 | + | 204 | WP_004098931.1 | HHA domain-containing protein | - |
| LGM29_RS29010 (LGM29_29010) | 47293..47550 | + | 258 | WP_210763816.1 | hypothetical protein | - |
| LGM29_RS29015 (LGM29_29015) | 47626..47880 | + | 255 | WP_210763815.1 | hypothetical protein | - |
| LGM29_RS29020 (LGM29_29020) | 48016..48792 | - | 777 | WP_064357852.1 | DUF2971 domain-containing protein | - |
| LGM29_RS29025 (LGM29_29025) | 49033..49356 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| LGM29_RS29035 (LGM29_29035) | 50283..51071 | - | 789 | Protein_59 | Alcohol dehydrogenase 2 | VF |
| LGM29_RS29040 (LGM29_29040) | 51494..52435 | - | 942 | WP_044351353.1 | pyridoxal-phosphate dependent enzyme | - |
| LGM29_RS29045 (LGM29_29045) | 52432..52746 | - | 315 | WP_044351355.1 | succinylglutamate desuccinylase/aspartoacylase family protein | - |
| LGM29_RS29050 (LGM29_29050) | 52800..53780 | + | 981 | WP_060415503.1 | IS5 family transposase ISKpn26 | Transposase |
| LGM29_RS29055 (LGM29_29055) | 54056..55405 | - | 1350 | WP_181250926.1 | group II intron reverse transcriptase/maturase | - |
| LGM29_RS29060 (LGM29_29060) | 56159..56641 | - | 483 | WP_063942099.1 | Protein SrpB | VF |
| LGM29_RS29065 (LGM29_29065) | 56924..57621 | + | 698 | WP_223335778.1 | IS1 family transposase | - |
| LGM29_RS29070 (LGM29_29070) | 57631..58713 | + | 1083 | WP_032140505.1 | lytic murein transglycosylase B | - |
| LGM29_RS29075 (LGM29_29075) | 58821..59366 | - | 546 | Protein_67 | APC family permease | - |
| LGM29_RS29080 (LGM29_29080) | 59429..60133 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS29085 (LGM29_29085) | 60279..63176 | - | 2898 | WP_023307208.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LGM29_RS29090 (LGM29_29090) | 63271..63876 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LGM29_RS29095 (LGM29_29095) | 63912..64580 | + | 669 | Protein_71 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | VF |
| LGM29_RS29100 (LGM29_29100) | 64821..65123 | - | 303 | WP_041146308.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LGM29_RS29105 (LGM29_29105) | 65128..65481 | - | 354 | WP_226550201.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGM29_RS29110 (LGM29_29110) | 65800..68487 | - | 2688 | WP_115192343.1 | cation-transporting P-type ATPase | - |
| LGM29_RS29115 (LGM29_29115) | 68538..68969 | - | 432 | WP_226550204.1 | universal stress protein | - |
| LGM29_RS29120 (LGM29_29120) | 69244..69941 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| LGM29_RS29125 (LGM29_29125) | 70278..71363 | + | 1086 | WP_115192341.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LGM29_RS29130 (LGM29_29130) | 71363..74425 | + | 3063 | WP_178994631.1 | efflux RND transporter permease subunit | - |
| LGM29_RS29135 (LGM29_29135) | 74422..75387 | + | 966 | WP_226550206.1 | acyltransferase | - |
| LGM29_RS29140 (LGM29_29140) | 75415..75990 | - | 576 | WP_041146315.1 | lipid IV(A) palmitoyltransferase PagP | - |
| LGM29_RS29145 (LGM29_29145) | 76251..77231 | + | 981 | WP_042934497.1 | IS5 family transposase IS5D | Transposase |
| LGM29_RS29150 (LGM29_29150) | 77664..78092 | + | 429 | WP_226550209.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LGM29_RS29155 (LGM29_29155) | 78092..79366 | + | 1275 | WP_226550211.1 | Y-family DNA polymerase | - |
| LGM29_RS29160 (LGM29_29160) | 79787..80542 | + | 756 | WP_226550213.1 | replication initiation protein RepE | - |
| LGM29_RS29165 (LGM29_29165) | 80905..82440 | - | 1536 | WP_001000406.1 | IS66 family transposase ISSgsp1 | Transposase |
| LGM29_RS29170 (LGM29_29170) | 82490..82837 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| LGM29_RS29175 (LGM29_29175) | 82834..83217 | - | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| LGM29_RS29180 (LGM29_29180) | 83248..84627 | - | 1380 | WP_226550215.1 | hypothetical protein | - |
| LGM29_RS29185 (LGM29_29185) | 84846..85490 | - | 645 | WP_226550218.1 | hypothetical protein | - |
| LGM29_RS29190 (LGM29_29190) | 85586..86686 | - | 1101 | WP_226550221.1 | hsdR | - |
| LGM29_RS29195 (LGM29_29195) | 86706..87461 | - | 756 | WP_226550223.1 | IS91 family transposase ISMno23 | Transposase |
| LGM29_RS29200 (LGM29_29200) | 88035..89182 | + | 1148 | WP_226550224.1 | IS3 family transposase ISEhe3 | Transposase |
| LGM29_RS29205 (LGM29_29205) | 89829..90185 | + | 357 | WP_226550226.1 | hypothetical protein | - |
| LGM29_RS29210 (LGM29_29210) | 90304..90594 | - | 291 | WP_226550228.1 | hypothetical protein | - |
| LGM29_RS29215 (LGM29_29215) | 90595..91422 | - | 828 | WP_226550230.1 | AAA family ATPase | - |
| LGM29_RS29220 (LGM29_29220) | 91630..92613 | + | 984 | WP_226550232.1 | hypothetical protein | - |
| LGM29_RS29225 (LGM29_29225) | 92679..92864 | + | 186 | WP_226550235.1 | hypothetical protein | - |
| LGM29_RS29230 (LGM29_29230) | 93092..94093 | - | 1002 | WP_226550238.1 | DUF4238 domain-containing protein | - |
| LGM29_RS29235 (LGM29_29235) | 94242..94481 | + | 240 | WP_226550242.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|