MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 124980 bp
Accession: NZ_CP084774 Location: 1..124980 Organism: Klebsiella quasipneumoniae subsp. similipneumoniae strain SB610 Replicon: plasmid pKqs_SB610_4
Accession: NZ_CP084774 Location: 1..124980 Organism: Klebsiella quasipneumoniae subsp. similipneumoniae strain SB610 Replicon: plasmid pKqs_SB610_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM29_RS28105 (LGM29_28105) | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| LGM29_RS28110 (LGM29_28110) | 1709..2449 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| LGM29_RS28115 (LGM29_28115) | 2570..2692 | - | 123 | Protein_2 | serine/threonine protein kinase | - |
| LGM29_RS28120 (LGM29_28120) | 3080..3388 | - | 309 | Protein_3 | IS3 family transposase ISLad1 | Transposase |
| LGM29_RS28125 (LGM29_28125) | 3405..4481 | - | 1077 | WP_023280912.1 | IS110 family transposase ISEc21 | Transposase |
| LGM29_RS28130 (LGM29_28130) | 4763..4942 | - | 180 | Protein_5 | DDE-type integrase/transposase/recombinase | - |
| LGM29_RS28135 (LGM29_28135) | 5023..6531 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| LGM29_RS28140 (LGM29_28140) | 7204..7892 | - | 689 | Protein_7 | IS3 family transposase | - |
| LGM29_RS28145 (LGM29_28145) | 8246..8494 | + | 249 | WP_004187025.1 | plasmid stabilization protein | - |
| LGM29_RS28150 (LGM29_28150) | 8484..8672 | + | 189 | Protein_9 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LGM29_RS28155 (LGM29_28155) | 8728..9425 | + | 698 | WP_223862167.1 | IS1 family transposase IS1G | Transposase |
| LGM29_RS28160 (LGM29_28160) | 9583..10248 | + | 666 | WP_020804663.1 | hypothetical protein | VF |
| LGM29_RS28165 (LGM29_28165) | 10475..11500 | + | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| LGM29_RS28170 (LGM29_28170) | 11818..12786 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| LGM29_RS28175 (LGM29_28175) | 13081..14106 | - | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| LGM29_RS28180 (LGM29_28180) | 14606..15253 | - | 648 | WP_226550189.1 | hypothetical protein | - |
| LGM29_RS28185 (LGM29_28185) | 15414..16111 | + | 698 | WP_223274115.1 | IS1 family transposase IS1X4 | Transposase |
| LGM29_RS28190 (LGM29_28190) | 16046..17173 | - | 1128 | WP_226550192.1 | DUF2357 domain-containing protein | - |
| LGM29_RS28195 (LGM29_28195) | 17177..19840 | - | 2664 | WP_088569358.1 | chromosome partitioning protein ParA | - |
| LGM29_RS28200 (LGM29_28200) | 19888..22044 | - | 2157 | WP_164877746.1 | hypothetical protein | - |
| LGM29_RS28205 (LGM29_28205) | 22041..25475 | - | 3435 | WP_080828750.1 | AAA domain-containing protein | - |
| LGM29_RS28210 (LGM29_28210) | 25472..26968 | - | 1497 | WP_080828748.1 | lipopolysaccharide kinase | - |
| LGM29_RS28215 (LGM29_28215) | 26965..27693 | - | 729 | WP_080828746.1 | PP2C family serine/threonine-protein phosphatase | - |
| LGM29_RS28220 (LGM29_28220) | 27686..28267 | - | 582 | WP_218190413.1 | hypothetical protein | - |
| LGM29_RS28225 (LGM29_28225) | 28269..29999 | - | 1731 | WP_080828743.1 | DUF1887 family CARF protein | - |
| LGM29_RS28230 (LGM29_28230) | 29996..32143 | - | 2148 | WP_080828741.1 | AAA family ATPase | - |
| LGM29_RS28235 (LGM29_28235) | 32146..33717 | - | 1572 | WP_080828740.1 | hypothetical protein | - |
| LGM29_RS28240 (LGM29_28240) | 33727..34428 | - | 702 | WP_080828737.1 | VWA domain-containing protein | - |
| LGM29_RS28245 (LGM29_28245) | 34477..34572 | - | 96 | Protein_28 | type I restriction endonuclease subunit M | - |
| LGM29_RS28250 (LGM29_28250) | 34635..34820 | - | 186 | Protein_29 | IS3 family transposase | - |
| LGM29_RS28255 (LGM29_28255) | 35284..35649 | + | 366 | WP_088569355.1 | ATP-binding protein | - |
| LGM29_RS28260 (LGM29_28260) | 35637..36221 | + | 585 | WP_080828729.1 | hypothetical protein | - |
| LGM29_RS28265 (LGM29_28265) | 36276..36899 | + | 624 | WP_128336675.1 | AAA family ATPase | - |
| LGM29_RS28270 (LGM29_28270) | 36883..37773 | + | 891 | WP_218190411.1 | hypothetical protein | - |
| LGM29_RS28275 (LGM29_28275) | 37730..37960 | + | 231 | WP_131050662.1 | hypothetical protein | - |
| LGM29_RS28280 (LGM29_28280) | 38407..39402 | + | 996 | WP_023332838.1 | tyrosine-type recombinase/integrase | - |
| LGM29_RS28285 (LGM29_28285) | 39769..41388 | + | 1620 | WP_023332837.1 | Phosphoethanolamine transferase EptA | VF |
| LGM29_RS28290 (LGM29_28290) | 41952..42673 | + | 722 | Protein_37 | IS3 family transposase ISEc36 | Transposase |
| LGM29_RS28295 (LGM29_28295) | 42724..43428 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS28300 (LGM29_28300) | 43477..43576 | + | 100 | Protein_39 | hypothetical protein | - |
| LGM29_RS28305 (LGM29_28305) | 44036..44356 | + | 321 | WP_001137910.1 | DUF134 domain-containing protein | - |
| LGM29_RS28310 (LGM29_28310) | 44331..44792 | + | 462 | WP_000626969.1 | NifB/NifX family molybdenum-iron cluster-binding protein | - |
| LGM29_RS28315 (LGM29_28315) | 44953..45390 | + | 438 | WP_016241611.1 | PaaI family thioesterase | - |
| LGM29_RS28320 (LGM29_28320) | 45505..45981 | + | 477 | WP_000043177.1 | hypothetical protein | VF |
| LGM29_RS28325 (LGM29_28325) | 46286..46636 | - | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LGM29_RS28330 (LGM29_28330) | 46798..48456 | + | 1659 | WP_000706606.1 | FAD-dependent oxidoreductase | - |
| LGM29_RS28335 (LGM29_28335) | 48702..49166 | + | 465 | WP_226550195.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| LGM29_RS28340 (LGM29_28340) | 49446..49970 | - | 525 | Protein_47 | IS5 family transposase ISKpn26 | Transposase |
| LGM29_RS28345 (LGM29_28345) | 50006..51445 | - | 1440 | Protein_48 | IS66 family transposase ISKox1 | Transposase |
| LGM29_RS28350 (LGM29_28350) | 51510..52214 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS28355 (LGM29_28355) | 52267..52836 | - | 570 | Protein_50 | IS6 family transposase IS26 | Transposase |
| LGM29_RS28360 (LGM29_28360) | 52902..52997 | - | 96 | Protein_51 | IS110 family transposase IS4321R | Transposase |
| LGM29_RS28365 (LGM29_28365) | 53076..53633 | - | 558 | WP_017901435.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LGM29_RS28370 (LGM29_28370) | 53656..54015 | - | 360 | WP_017901436.1 | cupin domain-containing protein | - |
| LGM29_RS28375 (LGM29_28375) | 54166..54555 | - | 390 | WP_017901438.1 | DUF86 domain-containing protein | - |
| LGM29_RS28380 (LGM29_28380) | 54552..54842 | - | 291 | WP_025999361.1 | nucleotidyltransferase family protein | - |
| LGM29_RS28385 (LGM29_28385) | 54878..54967 | + | 90 | Protein_56 | TetR family transcriptional regulator | - |
| LGM29_RS28390 (LGM29_28390) | 54979..55683 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS28395 (LGM29_28395) | 56687..57454 | + | 768 | WP_032638139.1 | membrane protein | - |
| LGM29_RS29795 | 57514..57636 | + | 123 | WP_021314799.1 | hypothetical protein | - |
| LGM29_RS28405 (LGM29_28405) | 59222..59455 | + | 234 | WP_021314798.1 | hypothetical protein | - |
| LGM29_RS28410 (LGM29_28410) | 59558..59893 | - | 336 | WP_021314797.1 | hypothetical protein | - |
| LGM29_RS28415 (LGM29_28415) | 59920..60147 | - | 228 | WP_021314796.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LGM29_RS28420 (LGM29_28420) | 60284..60406 | - | 123 | Protein_64 | DsbA family protein | - |
| LGM29_RS28425 (LGM29_28425) | 60428..61441 | - | 1014 | Protein_65 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LGM29_RS28430 (LGM29_28430) | 61494..62198 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS28435 (LGM29_28435) | 62622..63767 | + | 1146 | WP_001325018.1 | ABC transporter permease | - |
| LGM29_RS28440 (LGM29_28440) | 63773..64564 | + | 792 | WP_001325019.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| LGM29_RS28445 (LGM29_28445) | 64566..65504 | + | 939 | WP_000449980.1 | MlaD family protein | - |
| LGM29_RS28450 (LGM29_28450) | 65504..66145 | + | 642 | WP_000948259.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| LGM29_RS28455 (LGM29_28455) | 66493..67770 | + | 1278 | WP_001515737.1 | L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | - |
| LGM29_RS28460 (LGM29_28460) | 67959..68927 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| LGM29_RS28465 (LGM29_28465) | 69222..70247 | - | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| LGM29_RS28470 (LGM29_28470) | 70339..70809 | + | 471 | Protein_74 | PLP-dependent transferase | - |
| LGM29_RS28475 (LGM29_28475) | 70866..71284 | + | 419 | Protein_75 | IS1 family transposase IS1R | Transposase |
| LGM29_RS28480 (LGM29_28480) | 71385..72818 | + | 1434 | WP_001288432.1 | DNA cytosine methyltransferase | - |
| LGM29_RS28485 (LGM29_28485) | 72852..74066 | - | 1215 | WP_005012528.1 | type II site-specific deoxyribonuclease | - |
| LGM29_RS28490 (LGM29_28490) | 74306..74776 | + | 471 | WP_122052499.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LGM29_RS28495 (LGM29_28495) | 74667..75371 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS28500 (LGM29_28500) | 75437..75577 | + | 141 | Protein_80 | IS6 family transposase IS15DI | Transposase |
| LGM29_RS28505 (LGM29_28505) | 75730..76752 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| LGM29_RS28510 (LGM29_28510) | 77798..78127 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LGM29_RS28515 (LGM29_28515) | 78108..78389 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| LGM29_RS28520 (LGM29_28520) | 78667..79647 | + | 981 | WP_016947617.1 | IS5 family transposase ISKpn26 | Transposase |
| LGM29_RS28525 (LGM29_28525) | 79917..80942 | + | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| LGM29_RS28530 (LGM29_28530) | 81261..82228 | - | 968 | Protein_86 | IS5 family transposase IS903B | Transposase |
| LGM29_RS28535 (LGM29_28535) | 82523..83548 | - | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| LGM29_RS28540 (LGM29_28540) | 83635..84129 | - | 495 | Protein_88 | NADH:flavin oxidoreductase | - |
| LGM29_RS28545 (LGM29_28545) | 84158..84627 | - | 470 | Protein_89 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| LGM29_RS28550 (LGM29_28550) | 85591..86448 | - | 858 | WP_020316930.1 | incFII family plasmid replication initiator RepA | - |
| LGM29_RS28560 (LGM29_28560) | 86467..86641 | - | 175 | Protein_91 | protein CopA/IncA | - |
| LGM29_RS28565 (LGM29_28565) | 86726..87004 | - | 279 | WP_004099069.1 | replication regulatory protein RepA | - |
| LGM29_RS28570 (LGM29_28570) | 87325..87876 | - | 552 | WP_013213996.1 | Phospholipase D | VF |
| LGM29_RS28575 (LGM29_28575) | 87981..88060 | - | 80 | Protein_94 | hypothetical protein | - |
| LGM29_RS28580 (LGM29_28580) | 88166..88423 | - | 258 | WP_021312405.1 | bacteriocin immunity protein | - |
| LGM29_RS28585 (LGM29_28585) | 88425..90328 | - | 1904 | Protein_96 | klebicin B-related nuclease bacteriocin | - |
| LGM29_RS28590 (LGM29_28590) | 90437..90982 | + | 546 | WP_023317517.1 | hypothetical protein | - |
| LGM29_RS28595 (LGM29_28595) | 91210..91557 | - | 348 | WP_023317518.1 | DUF6404 family protein | - |
| LGM29_RS28600 (LGM29_28600) | 91577..92173 | - | 597 | WP_048235019.1 | fertility inhibition protein FinO | - |
| LGM29_RS28605 (LGM29_28605) | 92330..93055 | - | 726 | WP_023284651.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LGM29_RS28610 (LGM29_28610) | 93135..98396 | - | 5262 | WP_226550180.1 | Multifunctional conjugation protein TraI | Relaxase |
| LGM29_RS28615 (LGM29_28615) | 98396..100354 | - | 1959 | Protein_102 | type IV conjugative transfer system coupling protein TraD | - |
| LGM29_RS28620 (LGM29_28620) | 100498..101478 | - | 981 | WP_042934497.1 | IS5 family transposase IS5D | Transposase |
| LGM29_RS28625 (LGM29_28625) | 101634..101798 | - | 165 | Protein_104 | N-acetyltransferase | - |
| LGM29_RS28630 (LGM29_28630) | 101869..102849 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| LGM29_RS28635 (LGM29_28635) | 102962..104341 | + | 1380 | WP_226550183.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| LGM29_RS28640 (LGM29_28640) | 104334..105029 | + | 696 | WP_000370412.1 | lactate utilization protein C | - |
| LGM29_RS28645 (LGM29_28645) | 105079..105459 | - | 381 | Protein_108 | gluconate permease | - |
| LGM29_RS28650 (LGM29_28650) | 105670..105981 | + | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| LGM29_RS28655 (LGM29_28655) | 105978..106397 | + | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LGM29_RS28660 (LGM29_28660) | 106434..107636 | - | 1203 | WP_003031541.1 | hypothetical protein | - |
| LGM29_RS28665 (LGM29_28665) | 107629..107958 | - | 330 | WP_000121260.1 | hypothetical protein | - |
| LGM29_RS28670 (LGM29_28670) | 107955..108614 | - | 660 | WP_176759338.1 | maturation control protein | - |
| LGM29_RS28675 (LGM29_28675) | 109017..109130 | - | 114 | Protein_114 | IS1 family transposase | - |
| LGM29_RS28680 (LGM29_28680) | 109267..109590 | + | 324 | WP_157843664.1 | Tn7-like element transposition protein TnsE | - |
| LGM29_RS28685 (LGM29_28685) | 109754..110662 | + | 909 | WP_117250874.1 | WYL domain-containing protein | - |
| LGM29_RS28690 (LGM29_28690) | 110677..112407 | + | 1731 | WP_015632415.1 | DUF262 domain-containing protein | - |
| LGM29_RS28695 (LGM29_28695) | 112419..114800 | + | 2382 | WP_048270271.1 | class I SAM-dependent DNA methyltransferase | - |
| LGM29_RS28700 (LGM29_28700) | 114800..116197 | + | 1398 | WP_136048876.1 | restriction endonuclease subunit S | - |
| LGM29_RS28705 (LGM29_28705) | 116184..118084 | + | 1901 | Protein_120 | type I restriction endonuclease | - |
| LGM29_RS28710 (LGM29_28710) | 118138..118842 | - | 705 | WP_016237027.1 | IS6 family transposase IS26 | Transposase |
| LGM29_RS28715 (LGM29_28715) | 118937..120208 | + | 1272 | WP_226550186.1 | Y-family DNA polymerase | - |
| LGM29_RS28720 (LGM29_28720) | 120287..120538 | + | 252 | WP_004187100.1 | hypothetical protein | - |
| LGM29_RS28725 (LGM29_28725) | 120592..120897 | + | 306 | WP_064176598.1 | hypothetical protein | - |
| LGM29_RS28730 (LGM29_28730) | 122103..123074 | - | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LGM29_RS28735 (LGM29_28735) | 123074..124240 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|