MGE detailed information
MGE type: Genomic_island MGE length: 37037 bp
Accession: NZ_CP084741 Location: 1813199..1850235 Organism: Pectobacterium carotovorum strain A077-S18-O15 Replicon: chromosome
Accession: NZ_CP084741 Location: 1813199..1850235 Organism: Pectobacterium carotovorum strain A077-S18-O15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHL03_RS07945 (LHL03_07945) | 1809494..1810333 | - | 840 | WP_010298718.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| LHL03_RS07950 (LHL03_07950) | 1810498..1811109 | - | 612 | WP_044203472.1 | NAD(P)-dependent oxidoreductase | - |
| LHL03_RS07955 (LHL03_07955) | 1811212..1811652 | + | 441 | WP_138255530.1 | helix-turn-helix domain-containing protein | - |
| LHL03_RS07960 (LHL03_07960) | 1811788..1812792 | - | 1005 | WP_138255529.1 | threonine/serine dehydratase | - |
| LHL03_RS07965 (LHL03_07965) | 1812845..1813183 | + | 339 | WP_138255528.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LHL03_RS07970 (LHL03_07970) | 1813199..1813591 | - | 393 | WP_029368005.1 | helix-turn-helix domain-containing protein | - |
| LHL03_RS07975 (LHL03_07975) | 1813681..1814106 | + | 426 | WP_039506793.1 | DoxX family protein | - |
| LHL03_RS07980 (LHL03_07980) | 1814225..1814860 | + | 636 | WP_138255527.1 | NAD(P)H-binding protein | - |
| LHL03_RS07985 (LHL03_07985) | 1814928..1815521 | - | 594 | WP_138255526.1 | flavodoxin | - |
| LHL03_RS07990 (LHL03_07990) | 1815574..1816773 | - | 1200 | WP_138255525.1 | multidrug effflux MFS transporter | - |
| LHL03_RS07995 (LHL03_07995) | 1816942..1818177 | - | 1236 | WP_138255524.1 | Riboflavin transporter RibZ | VF |
| LHL03_RS08000 (LHL03_08000) | 1818244..1818690 | + | 447 | WP_138255523.1 | helix-turn-helix domain-containing protein | - |
| LHL03_RS08005 (LHL03_08005) | 1818902..1820338 | + | 1437 | WP_138255522.1 | 6-phospho-beta-glucosidase | - |
| LHL03_RS08010 (LHL03_08010) | 1820501..1820983 | + | 483 | WP_138255521.1 | cold shock domain-containing protein | - |
| LHL03_RS08015 (LHL03_08015) | 1821159..1821698 | + | 540 | WP_010298734.1 | DUF2058 domain-containing protein | - |
| LHL03_RS08020 (LHL03_08020) | 1822011..1822769 | + | 759 | WP_138255520.1 | isocitrate lyase/phosphoenolpyruvate mutase family protein | - |
| LHL03_RS08025 (LHL03_08025) | 1822769..1823830 | + | 1062 | WP_138255519.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| LHL03_RS08030 (LHL03_08030) | 1823881..1825485 | - | 1605 | WP_223806325.1 | diguanylate cyclase DgcJ | - |
| LHL03_RS08035 (LHL03_08035) | 1825627..1825872 | + | 246 | WP_039535606.1 | YmjA family protein | - |
| LHL03_RS08040 (LHL03_08040) | 1826097..1827128 | - | 1032 | WP_039357231.1 | methionine synthase | - |
| LHL03_RS08045 (LHL03_08045) | 1827159..1828136 | - | 978 | WP_138255518.1 | DUF1852 domain-containing protein | - |
| LHL03_RS08050 (LHL03_08050) | 1828519..1828863 | - | 345 | WP_138255517.1 | gamma-glutamylcyclotransferase family protein | - |
| LHL03_RS08055 (LHL03_08055) | 1829170..1830372 | + | 1203 | WP_138255516.1 | tyrosine--tRNA ligase | - |
| LHL03_RS08060 (LHL03_08060) | 1830497..1831387 | + | 891 | WP_138255515.1 | oxidoreductase | - |
| LHL03_RS08065 (LHL03_08065) | 1831384..1831578 | - | 195 | WP_138255514.1 | hypothetical protein | - |
| LHL03_RS08070 (LHL03_08070) | 1832094..1833512 | + | 1419 | WP_223806324.1 | hypothetical protein | VF |
| LHL03_RS08075 (LHL03_08075) | 1834759..1835902 | + | 1144 | Protein_1571 | IS3 family transposase | - |
| LHL03_RS08080 (LHL03_08080) | 1836238..1836966 | + | 729 | WP_138255513.1 | hypothetical protein | - |
| LHL03_RS08085 (LHL03_08085) | 1836966..1837577 | + | 612 | WP_138255512.1 | TIR domain-containing protein | - |
| LHL03_RS08090 (LHL03_08090) | 1838122..1839315 | + | 1194 | WP_138255511.1 | toll/interleukin-1 receptor domain-containing protein | - |
| LHL03_RS08095 (LHL03_08095) | 1839312..1840130 | + | 819 | WP_138255510.1 | hypothetical protein | - |
| LHL03_RS08100 (LHL03_08100) | 1840453..1841115 | - | 663 | WP_138255509.1 | hypothetical protein | - |
| LHL03_RS08105 (LHL03_08105) | 1841109..1841600 | - | 492 | WP_138255508.1 | TIR domain-containing protein | - |
| LHL03_RS08110 (LHL03_08110) | 1841637..1842662 | - | 1026 | WP_138255507.1 | putative DNA base hypermodification protein | - |
| LHL03_RS08115 (LHL03_08115) | 1842655..1843209 | - | 555 | WP_138255506.1 | adenylate kinase | - |
| LHL03_RS08120 (LHL03_08120) | 1843206..1844252 | - | 1047 | WP_223806323.1 | thymidylate synthase | - |
| LHL03_RS08125 (LHL03_08125) | 1844890..1845337 | + | 448 | Protein_1581 | ArdC family protein | - |
| LHL03_RS08130 (LHL03_08130) | 1845480..1845716 | + | 237 | WP_010305008.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| LHL03_RS08135 (LHL03_08135) | 1845719..1846033 | + | 315 | WP_138255504.1 | CcdB family protein | Toxin Detail |
| LHL03_RS08140 (LHL03_08140) | 1846067..1846235 | - | 169 | Protein_1584 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| LHL03_RS08150 (LHL03_08150) | 1846694..1847491 | - | 798 | WP_138255484.1 | DgsA anti-repressor MtfA | - |
| LHL03_RS08155 (LHL03_08155) | 1847722..1848108 | - | 387 | WP_138255483.1 | lysozyme inhibitor LprI family protein | - |
| LHL03_RS08160 (LHL03_08160) | 1848351..1848830 | + | 480 | WP_190306468.1 | hypothetical protein | - |
| LHL03_RS08165 (LHL03_08165) | 1848885..1849481 | - | 597 | WP_010307991.1 | YolA family protein | - |
| LHL03_RS08170 (LHL03_08170) | 1850068..1850235 | + | 168 | WP_010280855.1 | YqaE/Pmp3 family membrane protein | - |
| LHL03_RS08175 (LHL03_08175) | 1850322..1851743 | - | 1422 | WP_138255481.1 | DASS family sodium-coupled anion symporter | - |
| LHL03_RS08180 (LHL03_08180) | 1851890..1853239 | - | 1350 | WP_039473467.1 | adenylosuccinate lyase family protein | - |
| LHL03_RS08185 (LHL03_08185) | 1853466..1854206 | + | 741 | WP_010308003.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|