MGE detailed information
MGE type: Genomic_island MGE length: 16665 bp
Accession: NZ_CP084683 Location: 4115143..4131807 Organism: Escherichia coli strain BL21(RP) Replicon: chromosome
Accession: NZ_CP084683 Location: 4115143..4131807 Organism: Escherichia coli strain BL21(RP) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGS58_RS19840 (4111115) | 4111115..4111516 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (4112234) | 4112234..4112314 | - | 81 | NuclAT_14 | - | - |
| - (4112234) | 4112234..4112314 | - | 81 | NuclAT_14 | - | - |
| - (4112234) | 4112234..4112314 | - | 81 | NuclAT_14 | - | - |
| - (4112234) | 4112234..4112314 | - | 81 | NuclAT_14 | - | - |
| LGS58_RS19845 (4111574) | 4111574..4112818 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LGS58_RS19850 (4112910) | 4112910..4113368 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LGS58_RS19855 (4113629) | 4113629..4115086 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| LGS58_RS19860 (4115143) | 4115143..4115664 | - | 522 | Protein_3926 | peptide chain release factor H | - |
| LGS58_RS19865 (4115663) | 4115663..4115866 | - | 204 | Protein_3927 | RtcB family protein | - |
| LGS58_RS19870 (4116112) | 4116112..4116564 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| LGS58_RS19875 (4116574) | 4116574..4116972 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LGS58_RS19880 (4116975) | 4116975..4117268 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LGS58_RS19885 (4117320) | 4117320..4118375 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| LGS58_RS19890 (4118446) | 4118446..4119231 | - | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| LGS58_RS19895 (4119203) | 4119203..4120915 | + | 1713 | Protein_3933 | Flagellar biosynthesis protein FlhA | VF |
| LGS58_RS19900 (4121131) | 4121131..4121628 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| LGS58_RS19905 (4121804) | 4121804..4122577 | - | 774 | WP_001353765.1 | Murein DD-endopeptidase MepH | VF |
| LGS58_RS19910 (4122763) | 4122763..4123023 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| LGS58_RS19915 (4123026) | 4123026..4123304 | + | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| LGS58_RS19920 (4123460) | 4123460..4124200 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LGS58_RS19925 (4124171) | 4124171..4124938 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| LGS58_RS19930 (4125144) | 4125144..4125722 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| LGS58_RS19935 (4125962) | 4125962..4128406 | + | 2445 | WP_000973107.1 | Acyl-coenzyme A dehydrogenase | VF |
| LGS58_RS19940 (4128449) | 4128449..4128895 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| LGS58_RS19945 (4129076) | 4129076..4129846 | + | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| LGS58_RS19950 (4129887) | 4129887..4131023 | - | 1137 | WP_226347319.1 | ISAs1 family transposase ISEc1 | Transposase |
| LGS58_RS19955 (4131454) | 4131454..4131825 | - | 372 | WP_012777340.1 | hypothetical protein | - |
| LGS58_RS19960 (4132126) | 4132126..4133223 | + | 1098 | WP_000678646.1 | murein transglycosylase A | - |
| LGS58_RS19965 (4133462) | 4133462..4134268 | + | 807 | WP_000117728.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| LGS58_RS19970 (4134319) | 4134319..4134762 | - | 444 | WP_000184261.1 | cysteine desulfurase sulfur acceptor subunit CsdE | - |
| LGS58_RS19975 (4134762) | 4134762..4135967 | - | 1206 | WP_001300698.1 | cysteine desulfurase CsdA | - |
| LGS58_RS19980 (4136159) | 4136159..4136386 | + | 228 | WP_000750398.1 | YgdI/YgdR family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|