MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 51852 bp
Accession: NZ_CP084655 Location: 4815868..4867719 Organism: Pectobacterium brasiliense strain SR10 Replicon: chromosome
Accession: NZ_CP084655 Location: 4815868..4867719 Organism: Pectobacterium brasiliense strain SR10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL97_RS21720 (LGL97_21720) | 4811209..4812117 | - | 909 | WP_039316060.1 | lipid kinase | - |
| LGL97_RS21725 (LGL97_21725) | 4812393..4813865 | + | 1473 | WP_225584171.1 | sensor domain-containing diguanylate cyclase | - |
| LGL97_RS21730 (LGL97_21730) | 4813952..4814119 | - | 168 | WP_116362855.1 | YqaE/Pmp3 family membrane protein | - |
| LGL97_RS21735 (LGL97_21735) | 4814274..4814660 | + | 387 | WP_225584170.1 | lysozyme inhibitor LprI family protein | - |
| LGL97_RS21745 (LGL97_21745) | 4814900..4815697 | + | 798 | WP_225584169.1 | DgsA anti-repressor MtfA | - |
| LGL97_RS21755 (LGL97_21755) | 4816045..4817316 | + | 1272 | WP_039319747.1 | Prophage integrase IntA ; Integrase | Integrase |
| LGL97_RS21760 (LGL97_21760) | 4817450..4817764 | - | 315 | WP_039319744.1 | helix-turn-helix transcriptional regulator | - |
| LGL97_RS21765 (LGL97_21765) | 4817950..4818264 | - | 315 | WP_039319862.1 | helix-turn-helix transcriptional regulator | - |
| LGL97_RS21770 (LGL97_21770) | 4818412..4818684 | + | 273 | WP_010287755.1 | helix-turn-helix transcriptional regulator | - |
| LGL97_RS21775 (LGL97_21775) | 4819102..4820016 | + | 915 | WP_159398230.1 | hypothetical protein | - |
| LGL97_RS21780 (LGL97_21780) | 4820170..4820364 | + | 195 | WP_025918863.1 | AlpA family transcriptional regulator | - |
| LGL97_RS21785 (LGL97_21785) | 4820381..4820965 | + | 585 | WP_159398231.1 | DUF2857 domain-containing protein | - |
| LGL97_RS21790 (LGL97_21790) | 4820955..4821164 | + | 210 | WP_039320792.1 | TraR/DksA family transcriptional regulator | - |
| LGL97_RS21795 (LGL97_21795) | 4821450..4822238 | + | 789 | WP_010287209.1 | hypothetical protein | - |
| LGL97_RS21800 (LGL97_21800) | 4822624..4824810 | - | 2187 | WP_010287203.1 | AAA family ATPase | - |
| LGL97_RS21805 (LGL97_21805) | 4825308..4825529 | + | 222 | WP_010287613.1 | hypothetical protein | - |
| LGL97_RS21810 (LGL97_21810) | 4825598..4826263 | + | 666 | WP_225584168.1 | Type IV secretion system protein virB1 | VF |
| LGL97_RS21815 (LGL97_21815) | 4826260..4826541 | + | 282 | WP_010287611.1 | TrbC/VirB2 family protein | - |
| LGL97_RS21820 (LGL97_21820) | 4826551..4829298 | + | 2748 | WP_225584167.1 | Type IV secretion system protein virB4 | VF |
| LGL97_RS21825 (LGL97_21825) | 4829322..4830038 | + | 717 | WP_225584166.1 | type IV secretion system protein | - |
| LGL97_RS21830 (LGL97_21830) | 4830049..4830273 | + | 225 | WP_225584164.1 | EexN family lipoprotein | - |
| LGL97_RS21835 (LGL97_21835) | 4830285..4831325 | + | 1041 | WP_225584163.1 | type IV secretion system protein | - |
| LGL97_RS21840 (LGL97_21840) | 4831413..4831553 | + | 141 | WP_010286996.1 | hypothetical protein | - |
| LGL97_RS21845 (LGL97_21845) | 4831546..4832229 | + | 684 | WP_010286993.1 | Type IV secretion system protein PtlE | VF |
| LGL97_RS21850 (LGL97_21850) | 4832229..4833119 | + | 891 | WP_010286991.1 | P-type conjugative transfer protein VirB9 | - |
| LGL97_RS21855 (LGL97_21855) | 4833116..4834339 | + | 1224 | WP_225584162.1 | Type IV secretion system protein virB10 | VF |
| LGL97_RS21860 (LGL97_21860) | 4834329..4835345 | + | 1017 | WP_225584161.1 | Type IV secretion system protein VirB11 | VF |
| LGL97_RS21865 (LGL97_21865) | 4835389..4835691 | + | 303 | WP_010287717.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LGL97_RS21870 (LGL97_21870) | 4836417..4838279 | + | 1863 | WP_225584160.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LGL97_RS21875 (LGL97_21875) | 4838288..4839034 | + | 747 | WP_039320867.1 | MobC family replication-relaxation protein | - |
| LGL97_RS21880 (LGL97_21880) | 4839413..4839907 | + | 495 | WP_010287542.1 | Lrp/AsnC family transcriptional regulator | - |
| LGL97_RS21885 (LGL97_21885) | 4839904..4840764 | - | 861 | WP_010287540.1 | EamA family transporter | - |
| LGL97_RS21890 (LGL97_21890) | 4840950..4841204 | + | 255 | WP_039320862.1 | hypothetical protein | - |
| LGL97_RS21895 (LGL97_21895) | 4841238..4841552 | - | 315 | WP_010287537.1 | CcdB family protein | Toxin Detail |
| LGL97_RS21900 (LGL97_21900) | 4841555..4841791 | - | 237 | WP_010287535.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| LGL97_RS21905 (LGL97_21905) | 4842111..4843055 | - | 945 | WP_159398235.1 | zincin-like metallopeptidase domain-containing protein | - |
| LGL97_RS21910 (LGL97_21910) | 4843441..4844163 | + | 723 | WP_072014229.1 | MurR/RpiR family transcriptional regulator | - |
| LGL97_RS21915 (LGL97_21915) | 4844341..4845768 | + | 1428 | WP_225584159.1 | glycoside hydrolase family 1 protein | - |
| LGL97_RS21920 (LGL97_21920) | 4845813..4847174 | + | 1362 | WP_010284507.1 | PTS transporter subunit EIIC | - |
| LGL97_RS21925 (LGL97_21925) | 4847798..4848364 | + | 567 | WP_052051620.1 | TetR family transcriptional regulator | - |
| LGL97_RS21930 (LGL97_21930) | 4848445..4849641 | + | 1197 | WP_039320401.1 | MFS transporter | - |
| LGL97_RS21935 (LGL97_21935) | 4849875..4850447 | - | 573 | Protein_4280 | IS630 family transposase ISEc33 | Transposase |
| LGL97_RS21940 (LGL97_21940) | 4850637..4850771 | - | 135 | Protein_4281 | transposase | - |
| LGL97_RS21945 (LGL97_21945) | 4850980..4852278 | - | 1299 | WP_225584158.1 | MFS transporter | - |
| LGL97_RS21950 (LGL97_21950) | 4852349..4853758 | - | 1410 | WP_226313271.1 | 5-aminovalerate aminotransferase DavT | VF |
| LGL97_RS21955 (LGL97_21955) | 4854097..4855350 | + | 1254 | WP_225584626.1 | D-amino acid dehydrogenase | - |
| LGL97_RS21960 (LGL97_21960) | 4855364..4856434 | + | 1071 | WP_225584627.1 | alanine racemase | - |
| LGL97_RS21965 (LGL97_21965) | 4856722..4856890 | - | 169 | Protein_4286 | EamA family transporter | - |
| LGL97_RS21970 (LGL97_21970) | 4857025..4857234 | - | 210 | WP_225584628.1 | putative selenium delivery protein YdfZ | - |
| LGL97_RS21975 (LGL97_21975) | 4857274..4857873 | - | 600 | WP_225584629.1 | MarC family protein | - |
| LGL97_RS21980 (LGL97_21980) | 4858089..4858754 | + | 666 | WP_225584630.1 | GntR family transcriptional regulator | - |
| LGL97_RS21985 (LGL97_21985) | 4858778..4859590 | - | 813 | WP_225584631.1 | 5-deoxy-glucuronate isomerase | - |
| LGL97_RS21990 (LGL97_21990) | 4859615..4860928 | - | 1314 | WP_225584632.1 | MFS transporter | - |
| LGL97_RS21995 (LGL97_21995) | 4861008..4862417 | - | 1410 | WP_226313272.1 | 5-aminovalerate aminotransferase DavT | VF |
| LGL97_RS22000 (LGL97_22000) | 4862752..4863936 | + | 1185 | WP_225584624.1 | mannonate dehydratase | - |
| LGL97_RS22005 (LGL97_22005) | 4864007..4865479 | + | 1473 | WP_225584623.1 | fructuronate reductase | - |
| LGL97_RS22010 (LGL97_22010) | 4865656..4866405 | + | 750 | WP_225584625.1 | GntR family transcriptional regulator | - |
| LGL97_RS22015 (LGL97_22015) | 4866474..4867449 | - | 976 | Protein_4296 | integrase core domain-containing protein | - |
| LGL97_RS22020 (LGL97_22020) | 4867898..4869175 | + | 1278 | WP_225584622.1 | integrase arm-type DNA-binding domain-containing protein | - |
| LGL97_RS22025 (LGL97_22025) | 4869296..4869694 | - | 399 | WP_225584621.1 | HNH endonuclease | - |
| LGL97_RS22030 (LGL97_22030) | 4870519..4870698 | + | 180 | WP_039280286.1 | hypothetical protein | - |
| LGL97_RS22035 (LGL97_22035) | 4870848..4871057 | - | 210 | WP_225584620.1 | DUF4926 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|