MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 7755 bp
Accession: NZ_CP084655 Location: 1228558..1236312 Organism: Pectobacterium brasiliense strain SR10 Replicon: chromosome
Accession: NZ_CP084655 Location: 1228558..1236312 Organism: Pectobacterium brasiliense strain SR10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL97_RS05440 (LGL97_05440) | 1224290..1225591 | + | 1302 | WP_010286407.1 | anaerobic C4-dicarboxylate transporter | - |
| LGL97_RS05445 (LGL97_05445) | 1225723..1226055 | + | 333 | WP_010286405.1 | divalent cation tolerance protein CutA | - |
| LGL97_RS05450 (LGL97_05450) | 1226031..1227761 | + | 1731 | WP_225582601.1 | protein-disulfide reductase DsbD | - |
| LGL97_RS05455 (LGL97_05455) | 1227796..1228371 | + | 576 | WP_014914059.1 | transcriptional regulator | - |
| LGL97_RS05465 (LGL97_05465) | 1228735..1229994 | + | 1260 | WP_225582602.1 | Prophage integrase IntS ; Integrase | Integrase |
| LGL97_RS05470 (LGL97_05470) | 1230089..1230283 | - | 195 | WP_012773549.1 | YlcI/YnfO family protein | - |
| LGL97_RS05475 (LGL97_05475) | 1230469..1230810 | + | 342 | WP_039552182.1 | hypothetical protein | - |
| LGL97_RS05480 (LGL97_05480) | 1231723..1232466 | + | 744 | WP_225582603.1 | MobC family replication-relaxation protein | - |
| LGL97_RS05485 (LGL97_05485) | 1232525..1232743 | + | 219 | WP_040036037.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LGL97_RS05490 (LGL97_05490) | 1232746..1233051 | + | 306 | WP_225582604.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LGL97_RS05495 (LGL97_05495) | 1233250..1233741 | - | 492 | WP_225582605.1 | hypothetical protein | - |
| LGL97_RS05500 (LGL97_05500) | 1233753..1235129 | - | 1377 | WP_225582606.1 | AAA family ATPase | - |
| LGL97_RS05505 (LGL97_05505) | 1235383..1235765 | - | 383 | Protein_1075 | GNAT family N-acetyltransferase | - |
| LGL97_RS05510 (LGL97_05510) | 1235762..1236055 | - | 294 | WP_225582607.1 | DUF1778 domain-containing protein | - |
| LGL97_RS05515 (LGL97_05515) | 1236399..1236638 | - | 240 | WP_094433667.1 | helix-turn-helix transcriptional regulator | - |
| LGL97_RS05520 (LGL97_05520) | 1236759..1237019 | + | 261 | WP_094433668.1 | helix-turn-helix transcriptional regulator | - |
| LGL97_RS22140 | 1237582..1237791 | - | 210 | WP_263868210.1 | hypothetical protein | - |
| LGL97_RS05525 (LGL97_05525) | 1237785..1238270 | + | 486 | WP_264164283.1 | toll/interleukin-1 receptor domain-containing protein | - |
| LGL97_RS05530 (LGL97_05530) | 1238488..1239477 | + | 990 | WP_094433670.1 | DUF4238 domain-containing protein | - |
| LGL97_RS05535 (LGL97_05535) | 1239687..1239947 | + | 261 | WP_094433671.1 | helix-turn-helix transcriptional regulator | - |
| LGL97_RS05540 (LGL97_05540) | 1240026..1240928 | - | 903 | WP_225582609.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|