MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 18376 bp
Accession: NZ_CP084654 Location: 3938664..3957039 Organism: Pectobacterium versatile strain SR12 Replicon: chromosome
Accession: NZ_CP084654 Location: 3938664..3957039 Organism: Pectobacterium versatile strain SR12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL95_RS17505 (LGL95_17505) | 3934250..3935701 | + | 1452 | WP_226305877.1 | L-asparagine permease | - |
| LGL95_RS17510 (LGL95_17510) | 3935778..3937931 | - | 2154 | WP_226305878.1 | ornithine decarboxylase | - |
| LGL95_RS17520 (LGL95_17520) | 3938845..3940104 | + | 1260 | WP_130622535.1 | hypothetical protein ; Integrase | Integrase |
| LGL95_RS17525 (LGL95_17525) | 3940557..3940898 | + | 342 | WP_130622536.1 | hypothetical protein | - |
| LGL95_RS17530 (LGL95_17530) | 3940950..3941537 | - | 588 | WP_226305879.1 | hypothetical protein | - |
| LGL95_RS17535 (LGL95_17535) | 3941679..3942422 | + | 744 | WP_130622538.1 | MobC family replication-relaxation protein | - |
| LGL95_RS17540 (LGL95_17540) | 3942481..3942699 | + | 219 | WP_119158863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LGL95_RS17545 (LGL95_17545) | 3942702..3943007 | + | 306 | WP_119158864.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LGL95_RS17550 (LGL95_17550) | 3943134..3944393 | - | 1260 | WP_119158865.1 | GIY-YIG nuclease family protein | - |
| LGL95_RS17555 (LGL95_17555) | 3944395..3946404 | - | 2010 | WP_193554739.1 | helicase-related protein | - |
| LGL95_RS17560 (LGL95_17560) | 3946397..3949018 | - | 2622 | WP_119158867.1 | N-6 DNA methylase | - |
| LGL95_RS17565 (LGL95_17565) | 3949096..3949308 | + | 213 | WP_023638430.1 | hypothetical protein | - |
| LGL95_RS17570 (LGL95_17570) | 3949274..3949843 | + | 570 | WP_085653890.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LGL95_RS17575 (LGL95_17575) | 3949968..3952970 | - | 3003 | WP_119879987.1 | DEAD/DEAH box helicase family protein | - |
| LGL95_RS17580 (LGL95_17580) | 3952970..3955063 | - | 2094 | WP_205080564.1 | site-specific DNA-methyltransferase | - |
| LGL95_RS17585 (LGL95_17585) | 3955316..3956440 | - | 1125 | WP_119879988.1 | hypothetical protein ; Integrase | Integrase |
| LGL95_RS17590 (LGL95_17590) | 3956558..3956782 | - | 225 | WP_119879989.1 | DUF1778 domain-containing protein | - |
| LGL95_RS17595 (LGL95_17595) | 3957123..3957365 | - | 243 | WP_109225474.1 | helix-turn-helix transcriptional regulator | - |
| LGL95_RS17600 (LGL95_17600) | 3957470..3957724 | + | 255 | WP_103942816.1 | helix-turn-helix transcriptional regulator | - |
| LGL95_RS17605 (LGL95_17605) | 3957809..3958057 | + | 249 | WP_103861239.1 | helix-turn-helix transcriptional regulator | - |
| LGL95_RS17610 (LGL95_17610) | 3958072..3958278 | + | 207 | WP_103972345.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| LGL95_RS17615 (LGL95_17615) | 3958361..3958540 | + | 180 | WP_230857571.1 | CcdB family protein | - |
| LGL95_RS17620 (LGL95_17620) | 3958584..3958700 | + | 117 | Protein_3442 | transposase | - |
| LGL95_RS17625 (LGL95_17625) | 3959063..3959479 | + | 417 | WP_107332409.1 | hypothetical protein | - |
| LGL95_RS17630 (LGL95_17630) | 3959550..3960845 | + | 1296 | WP_107332408.1 | insecticidal delta-endotoxin Cry8Ea1 family protein | - |
| LGL95_RS17635 (LGL95_17635) | 3961150..3961302 | - | 153 | WP_103942704.1 | helix-turn-helix domain-containing protein | - |
| LGL95_RS17640 (LGL95_17640) | 3961350..3961850 | - | 501 | WP_103861241.1 | serine acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|