MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103903 bp
Accession: NZ_CP084651 Location: 1..103903 Organism: Yersinia ruckeri strain 17Y0153 Replicon: plasmid p17Y0153.1
Accession: NZ_CP084651 Location: 1..103903 Organism: Yersinia ruckeri strain 17Y0153 Replicon: plasmid p17Y0153.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL87_RS17430 (LGL87_17455) | 1..1221 | + | 1221 | WP_049688202.1 | TniQ family protein | - |
| LGL87_RS17435 (LGL87_17460) | 1218..1538 | - | 321 | WP_038251894.1 | hypothetical protein | - |
| LGL87_RS17440 (LGL87_17465) | 1566..2306 | - | 741 | WP_038251931.1 | tyrosine-type recombinase/integrase | - |
| LGL87_RS17445 (LGL87_17470) | 2733..5990 | + | 3258 | WP_004722039.1 | P-loop NTPase fold protein | - |
| LGL87_RS17450 (LGL87_17475) | 6088..7590 | + | 1503 | WP_234055122.1 | DUF4041 domain-containing protein | - |
| LGL87_RS17455 (LGL87_17480) | 7879..8526 | + | 648 | WP_038251892.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LGL87_RS17460 (LGL87_17485) | 8838..9134 | - | 297 | WP_038251890.1 | hypothetical protein | - |
| LGL87_RS17465 (LGL87_17490) | 9533..10303 | + | 771 | WP_004722046.1 | HEPN domain-containing protein | - |
| LGL87_RS17470 (LGL87_17495) | 10341..10751 | + | 411 | Protein_9 | IS6 family transposase IS1635 | Transposase |
| LGL87_RS17475 (LGL87_17500) | 10785..11084 | - | 300 | WP_050777622.1 | hypothetical protein | - |
| LGL87_RS17480 (LGL87_17505) | 11225..14037 | - | 2813 | Protein_11 | Tn3 family transposase ISPsy42 | Transposase |
| LGL87_RS17485 (LGL87_17510) | 14204..14824 | + | 621 | WP_004722053.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LGL87_RS17490 (LGL87_17515) | 14821..17472 | + | 2652 | WP_115175337.1 | AAA family ATPase | - |
| LGL87_RS17495 (LGL87_17520) | 17679..18032 | + | 354 | Protein_14 | ISKra4 family transposase ISKpn19 | Transposase |
| LGL87_RS17500 (LGL87_17525) | 18142..19290 | - | 1149 | WP_038251888.1 | putative DNA binding domain-containing protein | - |
| LGL87_RS17505 (LGL87_17530) | 19269..21896 | - | 2628 | WP_004722060.1 | hypothetical protein | - |
| LGL87_RS17510 (LGL87_17535) | 21924..22308 | - | 385 | Protein_17 | type I restriction endonuclease subunit M | - |
| LGL87_RS17515 (LGL87_17540) | 22361..22600 | - | 240 | WP_004722063.1 | hypothetical protein | - |
| LGL87_RS17520 (LGL87_17545) | 23022..24227 | + | 1206 | WP_004722065.1 | IS91 family transposase ISVa3 | Transposase |
| LGL87_RS17525 (LGL87_17550) | 24604..25503 | - | 900 | WP_139127572.1 | hypothetical protein | - |
| LGL87_RS17530 (LGL87_17555) | 26414..27064 | - | 651 | WP_040155137.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| LGL87_RS17535 (LGL87_17560) | 27185..30163 | + | 2979 | WP_004723380.1 | Tn3 family transposase TnBth2 | Transposase |
| LGL87_RS17540 (LGL87_17565) | 30230..30325 | - | 96 | Protein_23 | IS6 family transposase | - |
| LGL87_RS17545 (LGL87_17570) | 30390..30482 | + | 93 | Protein_24 | helix-turn-helix domain-containing protein | - |
| LGL87_RS17550 (LGL87_17575) | 30545..30898 | + | 354 | WP_038251884.1 | hypothetical protein | - |
| LGL87_RS17555 (LGL87_17580) | 31128..31880 | + | 753 | WP_069971731.1 | HEAT repeat domain-containing protein | - |
| LGL87_RS17560 (LGL87_17585) | 32984..34081 | - | 1098 | WP_230596536.1 | Replication protein | - |
| LGL87_RS17565 (LGL87_17590) | 34830..35540 | + | 711 | WP_004720782.1 | PAS domain-containing protein | - |
| LGL87_RS17570 (LGL87_17595) | 35597..35758 | - | 162 | WP_004720783.1 | hypothetical protein | - |
| LGL87_RS17575 (LGL87_17600) | 36055..36426 | - | 372 | WP_004720785.1 | helix-turn-helix transcriptional regulator | - |
| LGL87_RS17580 (LGL87_17605) | 36717..37226 | + | 510 | WP_004720786.1 | transcription termination/antitermination NusG family protein | - |
| LGL87_RS17585 (LGL87_17610) | 37453..38154 | + | 702 | WP_004720789.1 | DUF2913 family protein | - |
| LGL87_RS17590 (LGL87_17615) | 38217..38417 | + | 201 | WP_004720790.1 | hypothetical protein | - |
| LGL87_RS17595 (LGL87_17620) | 38495..39538 | + | 1044 | WP_072012918.1 | hypothetical protein | VF |
| LGL87_RS17600 (LGL87_17625) | 39538..39963 | + | 426 | WP_049688159.1 | type IV pilus biogenesis protein PilM | - |
| LGL87_RS17605 (LGL87_17630) | 39984..41606 | + | 1623 | WP_004720794.1 | Outer membrane lipoprotein BfpB | VF |
| LGL87_RS17610 (LGL87_17635) | 41681..42334 | + | 654 | WP_143715016.1 | hypothetical protein | - |
| LGL87_RS17920 | 42338..42982 | + | 645 | WP_115369972.1 | type 4b pilus protein PilO2 | - |
| LGL87_RS17925 | 42928..43650 | + | 723 | WP_115369970.1 | type 4b pilus protein PilO2 | - |
| LGL87_RS17620 (LGL87_17645) | 43637..44224 | + | 588 | WP_049688157.1 | hypothetical protein | VF |
| LGL87_RS17625 (LGL87_17650) | 44228..45721 | + | 1494 | WP_069971730.1 | Type II secretion system protein E | VF |
| LGL87_RS17630 (LGL87_17655) | 45718..46860 | + | 1143 | WP_230596535.1 | hypothetical protein | VF |
| LGL87_RS17635 (LGL87_17660) | 46898..47491 | + | 594 | WP_038251880.1 | hypothetical protein | VF |
| LGL87_RS17640 (LGL87_17665) | 47553..48038 | + | 486 | WP_004720806.1 | hypothetical protein | VF |
| LGL87_RS17645 (LGL87_17670) | 48038..48688 | + | 651 | WP_038251878.1 | hypothetical protein | VF |
| LGL87_RS17650 (LGL87_17675) | 48685..50058 | + | 1374 | WP_099511713.1 | hypothetical protein | VF |
| LGL87_RS17655 (LGL87_17680) | 50584..51039 | + | 456 | WP_004720812.1 | hypothetical protein | VF |
| LGL87_RS17660 (LGL87_17685) | 51036..51824 | + | 789 | WP_038251876.1 | hypothetical protein | VF |
| LGL87_RS17665 (LGL87_17690) | 51824..52978 | + | 1155 | WP_004720814.1 | Twitching mobility protein | VF |
| LGL87_RS17670 (LGL87_17695) | 52975..53235 | + | 261 | WP_038251874.1 | IcmT/TraK family protein | - |
| LGL87_RS17675 (LGL87_17700) | 53251..56604 | + | 3354 | WP_004720815.1 | DUF5710 domain-containing protein | - |
| LGL87_RS17680 (LGL87_17705) | 56609..57067 | + | 459 | WP_049688154.1 | hypothetical protein | - |
| LGL87_RS17685 (LGL87_17710) | 57084..57806 | + | 723 | WP_004720818.1 | DotI/IcmL/TraM family protein | - |
| LGL87_RS17690 (LGL87_17715) | 58052..58819 | + | 768 | WP_004720821.1 | hypothetical protein | VF |
| LGL87_RS17695 (LGL87_17720) | 58822..60075 | + | 1254 | WP_004720823.1 | conjugal transfer protein TraO | - |
| LGL87_RS17700 (LGL87_17725) | 60135..60842 | + | 708 | WP_126940165.1 | hypothetical protein | - |
| LGL87_RS17705 (LGL87_17730) | 60842..61369 | + | 528 | WP_038251868.1 | conjugal transfer protein TraQ | - |
| LGL87_RS17710 (LGL87_17735) | 61394..61777 | + | 384 | WP_004720828.1 | hypothetical protein | - |
| LGL87_RS17715 (LGL87_17740) | 61838..62794 | + | 957 | WP_004720829.1 | hypothetical protein | - |
| LGL87_RS17720 (LGL87_17745) | 62817..65894 | + | 3078 | WP_038251865.1 | conjugal transfer protein | - |
| LGL87_RS17725 (LGL87_17750) | 65908..67101 | + | 1194 | WP_004720831.1 | conjugal transfer protein TraW | - |
| LGL87_RS17730 (LGL87_17755) | 67101..67706 | + | 606 | WP_038251864.1 | conjugal transfer protein TraX | - |
| LGL87_RS17735 (LGL87_17760) | 67773..69914 | + | 2142 | WP_004720832.1 | DotA/TraY family protein | - |
| LGL87_RS17740 (LGL87_17765) | 70020..70238 | + | 219 | WP_038251862.1 | plasmid stabilization protein | - |
| LGL87_RS17745 (LGL87_17770) | 70260..70940 | + | 681 | WP_038251860.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LGL87_RS17750 (LGL87_17775) | 71036..72319 | + | 1284 | WP_004720838.1 | hypothetical protein | - |
| LGL87_RS17755 (LGL87_17780) | 72324..73388 | + | 1065 | WP_004720840.1 | DsbC family protein | - |
| LGL87_RS17760 (LGL87_17785) | 73399..75699 | + | 2301 | WP_049688149.1 | hypothetical protein | VF |
| LGL87_RS17765 (LGL87_17790) | 75786..76322 | + | 537 | WP_038251858.1 | Phospholipase D | VF |
| LGL87_RS17770 (LGL87_17795) | 76423..79125 | - | 2703 | WP_004720844.1 | hypothetical protein | - |
| LGL87_RS17775 (LGL87_17800) | 79505..80554 | - | 1050 | WP_038251856.1 | Abi family protein | - |
| LGL87_RS17780 (LGL87_17805) | 80851..82776 | - | 1926 | WP_004720847.1 | Protein TraI | Relaxase |
| LGL87_RS17785 (LGL87_17810) | 82778..83122 | - | 345 | WP_004720848.1 | plasmid mobilization protein MobA | - |
| LGL87_RS17790 (LGL87_17815) | 83391..83714 | + | 324 | WP_004720850.1 | hypothetical protein | - |
| LGL87_RS17795 (LGL87_17820) | 83861..83977 | - | 117 | WP_220272310.1 | hypothetical protein | - |
| LGL87_RS17800 (LGL87_17825) | 84253..85071 | - | 819 | WP_004720855.1 | DUF932 domain-containing protein | - |
| LGL87_RS17805 (LGL87_17830) | 85505..85801 | - | 297 | WP_004720859.1 | NadS family protein | Antitoxin Detail |
| LGL87_RS17810 (LGL87_17835) | 85847..86170 | - | 324 | WP_038251855.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGL87_RS17815 (LGL87_17840) | 86322..86555 | + | 234 | WP_038251853.1 | hypothetical protein | - |
| LGL87_RS17820 (LGL87_17845) | 86563..86937 | - | 375 | WP_004720865.1 | hypothetical protein | - |
| LGL87_RS17825 (LGL87_17850) | 87026..87721 | - | 696 | WP_038251906.1 | IS6 family transposase ISYps1 | Transposase |
| LGL87_RS17830 (LGL87_17855) | 88262..89461 | + | 1200 | WP_038251850.1 | AAA family ATPase | - |
| LGL87_RS17835 (LGL87_17860) | 89470..90438 | + | 969 | WP_004723386.1 | ParB family protein | - |
| LGL87_RS17840 (LGL87_17865) | 90890..91213 | - | 324 | Protein_84 | integrase core domain-containing protein | - |
| LGL87_RS17845 (LGL87_17870) | 91278..91973 | - | 696 | WP_038251906.1 | IS6 family transposase ISYps1 | Transposase |
| LGL87_RS17850 (LGL87_17875) | 92256..93596 | - | 1341 | WP_049688270.1 | hypothetical protein | - |
| LGL87_RS17855 (LGL87_17880) | 93597..94193 | - | 597 | WP_038251904.1 | hypothetical protein | - |
| LGL87_RS17865 (LGL87_17890) | 96032..97117 | + | 1086 | WP_038251900.1 | hypothetical protein | - |
| LGL87_RS17870 (LGL87_17895) | 97271..98632 | - | 1362 | WP_004722020.1 | hypothetical protein | - |
| LGL87_RS17875 (LGL87_17900) | 99187..99549 | + | 363 | WP_004722021.1 | hypothetical protein | - |
| LGL87_RS17880 (LGL87_17905) | 99603..100304 | + | 702 | WP_004722022.1 | hypothetical protein | - |
| LGL87_RS17885 (LGL87_17910) | 100306..101085 | + | 780 | WP_004722026.1 | tyrosine-type recombinase/integrase | - |
| LGL87_RS17890 (LGL87_17915) | 101317..102996 | + | 1680 | WP_004722028.1 | IS3 family transposase ISXca2 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|