MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103903 bp
Accession: NZ_CP084649 Location: 1..103903 Organism: Yersinia ruckeri strain 17Y0155 Replicon: plasmid p17Y0155.1
Accession: NZ_CP084649 Location: 1..103903 Organism: Yersinia ruckeri strain 17Y0155 Replicon: plasmid p17Y0155.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL92_RS17330 (LGL92_17390) | 1..324 | + | 324 | WP_038251855.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGL92_RS17335 (LGL92_17395) | 370..666 | + | 297 | WP_004720859.1 | NadS family protein | Antitoxin Detail |
| LGL92_RS17340 (LGL92_17400) | 1100..1918 | + | 819 | WP_004720855.1 | DUF932 domain-containing protein | - |
| LGL92_RS17345 (LGL92_17410) | 2457..2780 | - | 324 | WP_004720850.1 | hypothetical protein | - |
| LGL92_RS17350 (LGL92_17415) | 3049..3393 | + | 345 | WP_004720848.1 | plasmid mobilization protein MobA | - |
| LGL92_RS17355 (LGL92_17420) | 3395..5320 | + | 1926 | WP_004720847.1 | Protein TraI | Relaxase |
| LGL92_RS17360 (LGL92_17425) | 5617..6666 | + | 1050 | WP_038251856.1 | Abi family protein | - |
| LGL92_RS17365 (LGL92_17430) | 7046..9748 | + | 2703 | WP_004720844.1 | hypothetical protein | - |
| LGL92_RS17370 (LGL92_17435) | 9849..10385 | - | 537 | WP_038251858.1 | Phospholipase D | VF |
| LGL92_RS17375 (LGL92_17440) | 10472..12772 | - | 2301 | WP_049688149.1 | hypothetical protein | VF |
| LGL92_RS17380 (LGL92_17445) | 12783..13847 | - | 1065 | WP_004720840.1 | DsbC family protein | - |
| LGL92_RS17385 (LGL92_17450) | 13852..15135 | - | 1284 | WP_004720838.1 | hypothetical protein | - |
| LGL92_RS17390 (LGL92_17455) | 15231..15911 | - | 681 | WP_038251860.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LGL92_RS17395 (LGL92_17460) | 15933..16151 | - | 219 | WP_038251862.1 | plasmid stabilization protein | - |
| LGL92_RS17400 (LGL92_17465) | 16257..18398 | - | 2142 | WP_004720832.1 | DotA/TraY family protein | - |
| LGL92_RS17405 (LGL92_17470) | 18465..19070 | - | 606 | WP_038251864.1 | conjugal transfer protein TraX | - |
| LGL92_RS17410 (LGL92_17475) | 19070..20263 | - | 1194 | WP_004720831.1 | conjugal transfer protein TraW | - |
| LGL92_RS17415 (LGL92_17480) | 20277..23354 | - | 3078 | WP_038251865.1 | conjugal transfer protein | - |
| LGL92_RS17420 (LGL92_17485) | 23377..24333 | - | 957 | WP_004720829.1 | hypothetical protein | - |
| LGL92_RS17425 (LGL92_17490) | 24394..24777 | - | 384 | WP_004720828.1 | hypothetical protein | - |
| LGL92_RS17430 (LGL92_17495) | 24802..25329 | - | 528 | WP_038251868.1 | conjugal transfer protein TraQ | - |
| LGL92_RS17435 (LGL92_17500) | 25329..26036 | - | 708 | WP_126940165.1 | hypothetical protein | - |
| LGL92_RS17440 (LGL92_17505) | 26096..27349 | - | 1254 | WP_004720823.1 | conjugal transfer protein TraO | - |
| LGL92_RS17445 (LGL92_17510) | 27352..28119 | - | 768 | WP_004720821.1 | hypothetical protein | VF |
| LGL92_RS17450 (LGL92_17515) | 28365..29087 | - | 723 | WP_004720818.1 | DotI/IcmL/TraM family protein | - |
| LGL92_RS17455 (LGL92_17520) | 29104..29562 | - | 459 | WP_049688154.1 | hypothetical protein | - |
| LGL92_RS17460 (LGL92_17525) | 29567..32920 | - | 3354 | WP_004720815.1 | DUF5710 domain-containing protein | - |
| LGL92_RS17465 (LGL92_17530) | 32936..33196 | - | 261 | WP_038251874.1 | IcmT/TraK family protein | - |
| LGL92_RS17470 (LGL92_17535) | 33193..34347 | - | 1155 | WP_004720814.1 | Twitching mobility protein | VF |
| LGL92_RS17475 (LGL92_17540) | 34347..35135 | - | 789 | WP_038251876.1 | hypothetical protein | VF |
| LGL92_RS17480 (LGL92_17545) | 35132..35587 | - | 456 | WP_004720812.1 | hypothetical protein | VF |
| LGL92_RS17485 (LGL92_17550) | 36113..37486 | - | 1374 | WP_099511713.1 | hypothetical protein | VF |
| LGL92_RS17490 (LGL92_17555) | 37483..38133 | - | 651 | WP_038251878.1 | hypothetical protein | VF |
| LGL92_RS17495 (LGL92_17560) | 38133..38618 | - | 486 | WP_004720806.1 | hypothetical protein | VF |
| LGL92_RS17500 (LGL92_17565) | 38680..39273 | - | 594 | WP_038251880.1 | hypothetical protein | VF |
| LGL92_RS17505 (LGL92_17570) | 39311..40453 | - | 1143 | WP_230596535.1 | hypothetical protein | VF |
| LGL92_RS17510 (LGL92_17575) | 40450..41943 | - | 1494 | WP_069971730.1 | Type II secretion system protein E | VF |
| LGL92_RS17515 (LGL92_17580) | 41947..42534 | - | 588 | WP_049688157.1 | hypothetical protein | VF |
| LGL92_RS17830 | 42521..43243 | - | 723 | WP_115369970.1 | type 4b pilus protein PilO2 | - |
| LGL92_RS17835 | 43189..43833 | - | 645 | WP_115369972.1 | type 4b pilus protein PilO2 | - |
| LGL92_RS17525 (LGL92_17590) | 43837..44490 | - | 654 | WP_143715016.1 | hypothetical protein | - |
| LGL92_RS17530 (LGL92_17595) | 44565..46187 | - | 1623 | WP_004720794.1 | Outer membrane lipoprotein BfpB | VF |
| LGL92_RS17535 (LGL92_17600) | 46208..46633 | - | 426 | WP_049688159.1 | type IV pilus biogenesis protein PilM | - |
| LGL92_RS17540 (LGL92_17605) | 46633..47676 | - | 1044 | WP_072012918.1 | hypothetical protein | VF |
| LGL92_RS17545 (LGL92_17610) | 47754..47954 | - | 201 | WP_004720790.1 | hypothetical protein | - |
| LGL92_RS17550 (LGL92_17615) | 48017..48718 | - | 702 | WP_004720789.1 | DUF2913 family protein | - |
| LGL92_RS17555 (LGL92_17620) | 48945..49454 | - | 510 | WP_004720786.1 | transcription termination/antitermination NusG family protein | - |
| LGL92_RS17560 (LGL92_17625) | 49745..50116 | + | 372 | WP_004720785.1 | helix-turn-helix transcriptional regulator | - |
| LGL92_RS17565 (LGL92_17630) | 50413..50574 | + | 162 | WP_004720783.1 | hypothetical protein | - |
| LGL92_RS17570 (LGL92_17635) | 50631..51341 | - | 711 | WP_004720782.1 | PAS domain-containing protein | - |
| LGL92_RS17575 (LGL92_17640) | 52090..53187 | + | 1098 | WP_230596536.1 | Replication protein | - |
| LGL92_RS17580 (LGL92_17645) | 54291..55043 | - | 753 | WP_069971731.1 | HEAT repeat domain-containing protein | - |
| LGL92_RS17585 (LGL92_17650) | 55273..55626 | - | 354 | WP_038251884.1 | hypothetical protein | - |
| LGL92_RS17590 (LGL92_17655) | 55689..55781 | - | 93 | Protein_53 | helix-turn-helix domain-containing protein | - |
| LGL92_RS17595 (LGL92_17660) | 55846..55941 | + | 96 | Protein_54 | IS6 family transposase | - |
| LGL92_RS17600 (LGL92_17665) | 56008..58986 | - | 2979 | WP_004723380.1 | Tn3 family transposase TnBth2 | Transposase |
| LGL92_RS17605 (LGL92_17670) | 59107..59757 | + | 651 | WP_040155137.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| LGL92_RS17610 (LGL92_17675) | 60668..61567 | + | 900 | WP_139127572.1 | hypothetical protein | - |
| LGL92_RS17615 (LGL92_17680) | 61944..63149 | - | 1206 | WP_004722065.1 | IS91 family transposase ISVa3 | Transposase |
| LGL92_RS17620 (LGL92_17685) | 63571..63810 | + | 240 | WP_004722063.1 | hypothetical protein | - |
| LGL92_RS17625 (LGL92_17690) | 63863..64247 | + | 385 | Protein_60 | type I restriction endonuclease subunit M | - |
| LGL92_RS17630 (LGL92_17695) | 64275..66902 | + | 2628 | WP_004722060.1 | hypothetical protein | - |
| LGL92_RS17635 (LGL92_17700) | 66881..68029 | + | 1149 | WP_038251888.1 | putative DNA binding domain-containing protein | - |
| LGL92_RS17640 (LGL92_17705) | 68139..68492 | - | 354 | Protein_63 | ISKra4 family transposase ISKpn19 | Transposase |
| LGL92_RS17645 (LGL92_17710) | 68699..71350 | - | 2652 | WP_115175337.1 | AAA family ATPase | - |
| LGL92_RS17650 (LGL92_17715) | 71347..71967 | - | 621 | WP_004722053.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LGL92_RS17655 (LGL92_17720) | 72134..74946 | + | 2813 | Protein_66 | Tn3 family transposase ISPsy42 | Transposase |
| LGL92_RS17660 (LGL92_17725) | 75087..75386 | + | 300 | WP_050777622.1 | hypothetical protein | - |
| LGL92_RS17665 (LGL92_17730) | 75420..75830 | - | 411 | Protein_68 | IS6 family transposase IS1635 | Transposase |
| LGL92_RS17670 (LGL92_17735) | 75861..76637 | - | 777 | WP_234056041.1 | HEPN domain-containing protein | - |
| LGL92_RS17675 (LGL92_17740) | 77036..77332 | + | 297 | WP_038251890.1 | hypothetical protein | - |
| LGL92_RS17680 (LGL92_17745) | 77644..78291 | - | 648 | WP_038251892.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LGL92_RS17685 (LGL92_17750) | 78580..80082 | - | 1503 | WP_004722040.1 | DUF4041 domain-containing protein | - |
| LGL92_RS17690 (LGL92_17755) | 80180..83437 | - | 3258 | WP_004722039.1 | P-loop NTPase fold protein | - |
| LGL92_RS17695 (LGL92_17760) | 83864..84604 | + | 741 | WP_038251931.1 | tyrosine-type recombinase/integrase | - |
| LGL92_RS17700 (LGL92_17765) | 84632..84952 | + | 321 | WP_038251894.1 | hypothetical protein | - |
| LGL92_RS17705 (LGL92_17770) | 84949..86169 | - | 1221 | WP_049688202.1 | TniQ family protein | - |
| LGL92_RS17710 (LGL92_17775) | 86166..87074 | - | 909 | WP_004722030.1 | TniB family NTP-binding protein | - |
| LGL92_RS17715 (LGL92_17780) | 87077..88756 | - | 1680 | WP_004722028.1 | IS3 family transposase ISXca2 | Transposase |
| LGL92_RS17720 (LGL92_17785) | 88988..89767 | - | 780 | WP_004722026.1 | tyrosine-type recombinase/integrase | - |
| LGL92_RS17725 (LGL92_17790) | 89769..90470 | - | 702 | WP_004722022.1 | hypothetical protein | - |
| LGL92_RS17730 (LGL92_17795) | 90524..90886 | - | 363 | WP_004722021.1 | hypothetical protein | - |
| LGL92_RS17735 (LGL92_17800) | 91441..92802 | + | 1362 | WP_004722020.1 | hypothetical protein | - |
| LGL92_RS17740 (LGL92_17805) | 92957..94042 | - | 1086 | WP_038251900.1 | hypothetical protein | - |
| LGL92_RS17745 (LGL92_17810) | 94069..95219 | + | 1151 | WP_087931031.1 | IS3 family transposase ISSpr1 | Transposase |
| LGL92_RS17750 (LGL92_17815) | 95881..96477 | + | 597 | WP_038251904.1 | hypothetical protein | - |
| LGL92_RS17755 (LGL92_17820) | 96478..97818 | + | 1341 | WP_049688270.1 | hypothetical protein | - |
| LGL92_RS17760 (LGL92_17825) | 98101..98796 | + | 696 | WP_038251906.1 | IS6 family transposase ISYps1 | Transposase |
| LGL92_RS17765 (LGL92_17830) | 98861..99184 | + | 324 | Protein_88 | integrase core domain-containing protein | - |
| LGL92_RS17770 (LGL92_17835) | 99636..100604 | - | 969 | WP_004723386.1 | ParB family protein | - |
| LGL92_RS17775 (LGL92_17840) | 100613..101812 | - | 1200 | WP_038251850.1 | AAA family ATPase | - |
| LGL92_RS17780 (LGL92_17845) | 102353..103048 | + | 696 | WP_038251906.1 | IS6 family transposase ISYps1 | Transposase |
| LGL92_RS17785 (LGL92_17850) | 103137..103511 | + | 375 | WP_004720865.1 | hypothetical protein | - |
| LGL92_RS17790 (LGL92_17855) | 103519..103752 | - | 234 | WP_038251853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|