MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103901 bp
Accession: NZ_CP084640 Location: 1..103901 Organism: Yersinia ruckeri strain 17Y0189 Replicon: plasmid p17Y0189.1
Accession: NZ_CP084640 Location: 1..103901 Organism: Yersinia ruckeri strain 17Y0189 Replicon: plasmid p17Y0189.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL94_RS17420 (LGL94_17410) | 1304..1627 | - | 324 | Protein_1 | integrase core domain-containing protein | - |
| LGL94_RS17425 (LGL94_17415) | 1692..2387 | - | 696 | WP_038251906.1 | IS6 family transposase ISYps1 | Transposase |
| LGL94_RS17430 (LGL94_17420) | 2670..4010 | - | 1341 | WP_049688270.1 | hypothetical protein | - |
| LGL94_RS17435 (LGL94_17425) | 4011..4607 | - | 597 | WP_038251904.1 | hypothetical protein | - |
| LGL94_RS17445 (LGL94_17435) | 6446..7531 | + | 1086 | WP_038251900.1 | hypothetical protein | - |
| LGL94_RS17450 (LGL94_17440) | 7686..8981 | - | 1296 | WP_038251898.1 | hypothetical protein | - |
| LGL94_RS17455 (LGL94_17445) | 9601..9963 | + | 363 | WP_004722021.1 | hypothetical protein | - |
| LGL94_RS17460 (LGL94_17450) | 10017..10718 | + | 702 | WP_004722022.1 | hypothetical protein | - |
| LGL94_RS17465 (LGL94_17455) | 10720..11499 | + | 780 | WP_004722026.1 | tyrosine-type recombinase/integrase | - |
| LGL94_RS17470 (LGL94_17460) | 11731..13410 | + | 1680 | WP_004722028.1 | IS3 family transposase ISXca2 | Transposase |
| LGL94_RS17475 (LGL94_17465) | 13413..14321 | + | 909 | WP_004722030.1 | TniB family NTP-binding protein | - |
| LGL94_RS17480 (LGL94_17470) | 14318..15538 | + | 1221 | WP_049688202.1 | TniQ family protein | - |
| LGL94_RS17485 (LGL94_17475) | 15535..15855 | - | 321 | WP_038251894.1 | hypothetical protein | - |
| LGL94_RS17490 (LGL94_17480) | 15883..16623 | - | 741 | WP_038251931.1 | tyrosine-type recombinase/integrase | - |
| LGL94_RS17495 (LGL94_17485) | 17050..20307 | + | 3258 | WP_004722039.1 | P-loop NTPase fold protein | - |
| LGL94_RS17500 (LGL94_17490) | 20405..21907 | + | 1503 | WP_004722040.1 | DUF4041 domain-containing protein | - |
| LGL94_RS17505 (LGL94_17495) | 22196..22843 | + | 648 | WP_038251892.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LGL94_RS17510 (LGL94_17500) | 23154..23450 | - | 297 | WP_038251890.1 | hypothetical protein | - |
| LGL94_RS17515 (LGL94_17505) | 23849..24619 | + | 771 | WP_004722046.1 | HEPN domain-containing protein | - |
| LGL94_RS17520 (LGL94_17510) | 24657..25067 | + | 411 | Protein_21 | IS6 family transposase IS1635 | Transposase |
| LGL94_RS17525 (LGL94_17515) | 25101..25400 | - | 300 | WP_050777622.1 | hypothetical protein | - |
| LGL94_RS17530 (LGL94_17520) | 25541..28353 | - | 2813 | Protein_23 | Tn3 family transposase ISPsy42 | Transposase |
| LGL94_RS17535 (LGL94_17525) | 28520..29140 | + | 621 | WP_004722053.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LGL94_RS17540 (LGL94_17530) | 29137..31788 | + | 2652 | WP_115175337.1 | AAA family ATPase | - |
| LGL94_RS17545 (LGL94_17535) | 31995..32348 | + | 354 | Protein_26 | ISKra4 family transposase ISKpn19 | Transposase |
| LGL94_RS17550 (LGL94_17540) | 32458..33606 | - | 1149 | WP_038251888.1 | putative DNA binding domain-containing protein | - |
| LGL94_RS17555 (LGL94_17545) | 33585..36212 | - | 2628 | WP_004722060.1 | hypothetical protein | - |
| LGL94_RS17560 (LGL94_17550) | 36240..36624 | - | 385 | Protein_29 | type I restriction endonuclease subunit M | - |
| LGL94_RS17565 (LGL94_17555) | 36677..36916 | - | 240 | WP_004722063.1 | hypothetical protein | - |
| LGL94_RS17570 (LGL94_17560) | 37338..38543 | + | 1206 | WP_004722065.1 | IS91 family transposase ISVa3 | Transposase |
| LGL94_RS17575 (LGL94_17565) | 38920..39819 | - | 900 | WP_139127572.1 | hypothetical protein | - |
| LGL94_RS17580 (LGL94_17570) | 40730..41380 | - | 651 | WP_040155137.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| LGL94_RS17585 (LGL94_17575) | 41501..44479 | + | 2979 | WP_004723380.1 | Tn3 family transposase TnBth2 | Transposase |
| LGL94_RS17590 (LGL94_17580) | 44546..44641 | - | 96 | Protein_35 | IS6 family transposase | - |
| LGL94_RS17595 (LGL94_17585) | 44706..44798 | + | 93 | Protein_36 | helix-turn-helix domain-containing protein | - |
| LGL94_RS17600 (LGL94_17590) | 44861..45214 | + | 354 | WP_038251884.1 | hypothetical protein | - |
| LGL94_RS17605 (LGL94_17595) | 45444..46196 | + | 753 | WP_069971731.1 | HEAT repeat domain-containing protein | - |
| LGL94_RS17610 (LGL94_17600) | 47300..48397 | - | 1098 | WP_230596536.1 | Replication protein | - |
| LGL94_RS17615 (LGL94_17605) | 49144..49854 | + | 711 | WP_004720782.1 | PAS domain-containing protein | - |
| LGL94_RS17620 (LGL94_17610) | 49911..50072 | - | 162 | WP_004720783.1 | hypothetical protein | - |
| LGL94_RS17625 (LGL94_17615) | 50369..50740 | - | 372 | WP_004720785.1 | helix-turn-helix transcriptional regulator | - |
| LGL94_RS17630 (LGL94_17620) | 51031..51540 | + | 510 | WP_004720786.1 | transcription termination/antitermination NusG family protein | - |
| LGL94_RS17635 (LGL94_17625) | 51767..52468 | + | 702 | WP_004720789.1 | DUF2913 family protein | - |
| LGL94_RS17640 (LGL94_17630) | 52531..52731 | + | 201 | WP_004720790.1 | hypothetical protein | - |
| LGL94_RS17645 (LGL94_17635) | 52809..53852 | + | 1044 | WP_072012918.1 | hypothetical protein | VF |
| LGL94_RS17650 (LGL94_17640) | 53852..54277 | + | 426 | WP_049688159.1 | type IV pilus biogenesis protein PilM | - |
| LGL94_RS17655 (LGL94_17645) | 54298..55920 | + | 1623 | WP_004720794.1 | Outer membrane lipoprotein BfpB | VF |
| LGL94_RS17660 (LGL94_17650) | 55995..56648 | + | 654 | WP_143715016.1 | hypothetical protein | - |
| LGL94_RS17665 (LGL94_17655) | 56652..57965 | + | 1314 | WP_038251882.1 | type 4b pilus protein PilO2 | - |
| LGL94_RS17670 (LGL94_17660) | 57952..58539 | + | 588 | WP_049688157.1 | hypothetical protein | VF |
| LGL94_RS17675 (LGL94_17665) | 58543..60036 | + | 1494 | WP_069971730.1 | Type II secretion system protein E | VF |
| LGL94_RS17680 (LGL94_17670) | 60033..61175 | + | 1143 | WP_230596535.1 | hypothetical protein | VF |
| LGL94_RS17685 (LGL94_17675) | 61213..61806 | + | 594 | WP_038251880.1 | hypothetical protein | VF |
| LGL94_RS17690 (LGL94_17680) | 61868..62353 | + | 486 | WP_004720806.1 | hypothetical protein | VF |
| LGL94_RS17695 (LGL94_17685) | 62353..63003 | + | 651 | WP_038251878.1 | hypothetical protein | VF |
| LGL94_RS17700 (LGL94_17690) | 63000..64373 | + | 1374 | WP_099511713.1 | hypothetical protein | VF |
| LGL94_RS17705 (LGL94_17695) | 64899..65354 | + | 456 | WP_004720812.1 | hypothetical protein | VF |
| LGL94_RS17710 (LGL94_17700) | 65351..66139 | + | 789 | WP_038251876.1 | hypothetical protein | VF |
| LGL94_RS17715 (LGL94_17705) | 66139..67293 | + | 1155 | WP_004720814.1 | Twitching mobility protein | VF |
| LGL94_RS17720 (LGL94_17710) | 67290..67550 | + | 261 | WP_038251874.1 | IcmT/TraK family protein | - |
| LGL94_RS17725 (LGL94_17715) | 67566..70919 | + | 3354 | WP_004720815.1 | DUF5710 domain-containing protein | - |
| LGL94_RS17730 (LGL94_17720) | 70924..71382 | + | 459 | WP_049688154.1 | hypothetical protein | - |
| LGL94_RS17735 (LGL94_17725) | 71399..72121 | + | 723 | WP_004720818.1 | DotI/IcmL/TraM family protein | - |
| LGL94_RS17740 (LGL94_17730) | 72367..73134 | + | 768 | WP_004720821.1 | hypothetical protein | VF |
| LGL94_RS17745 (LGL94_17735) | 73137..74390 | + | 1254 | WP_004720823.1 | conjugal transfer protein TraO | - |
| LGL94_RS17750 (LGL94_17740) | 74450..75157 | + | 708 | WP_126940165.1 | hypothetical protein | - |
| LGL94_RS17755 (LGL94_17745) | 75157..75684 | + | 528 | WP_038251868.1 | conjugal transfer protein TraQ | - |
| LGL94_RS17760 (LGL94_17750) | 75709..76092 | + | 384 | WP_004720828.1 | hypothetical protein | - |
| LGL94_RS17765 (LGL94_17755) | 76153..77109 | + | 957 | WP_004720829.1 | hypothetical protein | - |
| LGL94_RS17770 (LGL94_17760) | 77132..80209 | + | 3078 | WP_038251865.1 | conjugal transfer protein | - |
| LGL94_RS17775 (LGL94_17765) | 80223..81416 | + | 1194 | WP_004720831.1 | conjugal transfer protein TraW | - |
| LGL94_RS17780 (LGL94_17770) | 81416..82021 | + | 606 | WP_038251864.1 | conjugal transfer protein TraX | - |
| LGL94_RS17785 (LGL94_17775) | 82088..84229 | + | 2142 | WP_004720832.1 | DotA/TraY family protein | - |
| LGL94_RS17790 (LGL94_17780) | 84335..84553 | + | 219 | WP_038251862.1 | plasmid stabilization protein | - |
| LGL94_RS17795 (LGL94_17785) | 84575..85255 | + | 681 | WP_038251860.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LGL94_RS17800 (LGL94_17790) | 85351..86634 | + | 1284 | WP_004720838.1 | hypothetical protein | - |
| LGL94_RS17805 (LGL94_17795) | 86639..87703 | + | 1065 | WP_004720840.1 | DsbC family protein | - |
| LGL94_RS17810 (LGL94_17800) | 87714..90014 | + | 2301 | WP_049688149.1 | hypothetical protein | VF |
| LGL94_RS17815 (LGL94_17805) | 90101..90637 | + | 537 | WP_038251858.1 | Phospholipase D | VF |
| LGL94_RS17820 (LGL94_17810) | 90738..93440 | - | 2703 | WP_004720844.1 | hypothetical protein | - |
| LGL94_RS17825 (LGL94_17815) | 93820..94869 | - | 1050 | WP_038251856.1 | Abi family protein | - |
| LGL94_RS17830 (LGL94_17820) | 95166..97091 | - | 1926 | WP_004720847.1 | Protein TraI | Relaxase |
| LGL94_RS17835 (LGL94_17825) | 97093..97437 | - | 345 | WP_004720848.1 | plasmid mobilization protein MobA | - |
| LGL94_RS17840 (LGL94_17830) | 97706..98029 | + | 324 | WP_004720850.1 | hypothetical protein | - |
| LGL94_RS17845 (LGL94_17840) | 98568..99386 | - | 819 | WP_004720855.1 | DUF932 domain-containing protein | - |
| LGL94_RS17850 (LGL94_17845) | 99820..100116 | - | 297 | WP_004720859.1 | NadS family protein | Antitoxin Detail |
| LGL94_RS17855 (LGL94_17850) | 100162..100485 | - | 324 | WP_038251855.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGL94_RS17860 (LGL94_17855) | 100637..100870 | + | 234 | WP_038251853.1 | hypothetical protein | - |
| LGL94_RS17865 (LGL94_17860) | 100878..101252 | - | 375 | WP_004720865.1 | hypothetical protein | - |
| LGL94_RS17870 (LGL94_17865) | 101341..102036 | - | 696 | WP_038251906.1 | IS6 family transposase ISYps1 | Transposase |
| LGL94_RS17875 (LGL94_17870) | 102577..103776 | + | 1200 | WP_038251850.1 | AAA family ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|