MGE detailed information
MGE type: Prophage MGE length: 69315 bp
Accession: NZ_CP084635 Location: 2035391..2104705 Organism: Yersinia ruckeri strain 17Y0414 Replicon: chromosome
Accession: NZ_CP084635 Location: 2035391..2104705 Organism: Yersinia ruckeri strain 17Y0414 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL86_RS09325 (LGL86_09340) | 2030422..2031438 | - | 1017 | WP_038242680.1 | lipoate--protein ligase A | - |
| LGL86_RS09330 (LGL86_09345) | 2031501..2031965 | - | 465 | WP_004717693.1 | NlpC/P60 family protein | - |
| LGL86_RS09335 (LGL86_09350) | 2032110..2032490 | - | 381 | WP_038242681.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF | - |
| LGL86_RS09340 (LGL86_09355) | 2032487..2032831 | - | 345 | WP_038275987.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE | - |
| LGL86_RS09345 (LGL86_09360) | 2032828..2034495 | - | 1668 | WP_038242684.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| LGL86_RS09350 (LGL86_09365) | 2034492..2035394 | - | 903 | WP_071706603.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| LGL86_RS09355 (LGL86_09370) | 2035391..2037394 | - | 2004 | WP_038242688.1 | Bifunctional polymyxin resistance protein ArnA | VF |
| LGL86_RS09360 (LGL86_09375) | 2037394..2038374 | - | 981 | WP_038242690.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| LGL86_RS09365 (LGL86_09380) | 2038361..2039515 | - | 1155 | WP_004717707.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| LGL86_RS09370 (LGL86_09385) | 2039897..2040658 | - | 762 | WP_004717710.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LGL86_RS09375 (LGL86_09390) | 2040821..2041828 | - | 1008 | WP_096823423.1 | Vitamin B12 import system permease protein BtuC | VF |
| LGL86_RS09380 (LGL86_09395) | 2042145..2043392 | - | 1248 | WP_096823424.1 | IS607 family transposase ISCbo6 | Transposase |
| LGL86_RS09385 (LGL86_09400) | 2043477..2044175 | - | 699 | WP_234049418.1 | Eco47II family restriction endonuclease | - |
| LGL86_RS09390 (LGL86_09405) | 2044236..2044734 | - | 499 | Protein_1823 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LGL86_RS09395 (LGL86_09410) | 2044788..2045117 | + | 330 | WP_234049622.1 | DNA-binding protein | - |
| LGL86_RS09400 (LGL86_09415) | 2045057..2045218 | + | 162 | Protein_1825 | Rz1-like lysis system protein LysC | - |
| LGL86_RS09405 (LGL86_09420) | 2045205..2045666 | + | 462 | WP_096823426.1 | phage tail protein | - |
| LGL86_RS09410 (LGL86_09425) | 2045719..2046336 | + | 618 | WP_096823427.1 | phage virion morphogenesis protein | - |
| LGL86_RS09415 (LGL86_09430) | 2046418..2046618 | + | 201 | WP_230596566.1 | DUF2559 family protein | - |
| LGL86_RS09420 (LGL86_09435) | 2046615..2047202 | + | 588 | WP_096823428.1 | hypothetical protein | VF |
| LGL86_RS09425 (LGL86_09440) | 2047316..2047975 | + | 660 | WP_096823429.1 | phage baseplate assembly protein V | - |
| LGL86_RS09430 (LGL86_09445) | 2047912..2048682 | + | 771 | Protein_1831 | contractile injection system protein, VgrG/Pvc8 family | - |
| LGL86_RS09435 (LGL86_09450) | 2049102..2049398 | + | 297 | WP_032896992.1 | TM2 domain-containing protein | - |
| LGL86_RS09440 (LGL86_09455) | 2049612..2049908 | - | 297 | WP_004717732.1 | integration host factor subunit alpha | - |
| LGL86_RS09445 (LGL86_09460) | 2049913..2052300 | - | 2388 | WP_004717734.1 | phenylalanine--tRNA ligase subunit beta | - |
| LGL86_RS09450 (LGL86_09465) | 2052315..2053298 | - | 984 | WP_004717736.1 | phenylalanine--tRNA ligase subunit alpha | - |
| LGL86_RS09455 (LGL86_09475) | 2053779..2054135 | - | 357 | WP_004717737.1 | 50S ribosomal protein L20 | - |
| LGL86_RS09460 (LGL86_09480) | 2054173..2054370 | - | 198 | WP_002211834.1 | 50S ribosomal protein L35 | - |
| LGL86_RS09465 (LGL86_09485) | 2054469..2055020 | - | 552 | WP_002227898.1 | translation initiation factor IF-3 | - |
| LGL86_RS09470 (LGL86_09490) | 2055024..2056952 | - | 1929 | WP_004717744.1 | threonine--tRNA ligase | - |
| LGL86_RS09475 (LGL86_09495) | 2057471..2057800 | + | 330 | WP_038242705.1 | DUF1622 domain-containing protein | - |
| LGL86_RS09480 (LGL86_09500) | 2058346..2058558 | + | 213 | WP_004717749.1 | KTSC domain-containing protein | - |
| LGL86_RS09485 (LGL86_09505) | 2058843..2059076 | - | 234 | WP_004717751.1 | hypothetical protein | - |
| LGL86_RS09490 (LGL86_09510) | 2059334..2059693 | + | 360 | WP_038275998.1 | hypothetical protein | - |
| LGL86_RS09495 (LGL86_09515) | 2060630..2060881 | - | 252 | WP_004717757.1 | hypothetical protein | - |
| LGL86_RS09500 (LGL86_09520) | 2061153..2061833 | + | 681 | WP_004717760.1 | MarC family NAAT transporter | - |
| LGL86_RS09505 (LGL86_09525) | 2061978..2062634 | - | 657 | WP_038242711.1 | Endo-type membrane-bound lytic murein transglycosylase A | VF |
| LGL86_RS09510 (LGL86_09530) | 2062776..2063807 | + | 1032 | WP_038242712.1 | hypothetical protein | VF |
| LGL86_RS09515 (LGL86_09535) | 2063804..2064694 | + | 891 | WP_038242713.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LGL86_RS09520 (LGL86_09540) | 2064694..2065575 | + | 882 | WP_004717767.1 | iron/manganese ABC transporter permease subunit YfeC | - |
| LGL86_RS09525 (LGL86_09545) | 2065572..2066465 | + | 894 | WP_038242715.1 | metal ABC transporter permease | - |
| LGL86_RS09530 (LGL86_09550) | 2066656..2067519 | + | 864 | WP_004717772.1 | fructosamine kinase family protein | - |
| LGL86_RS09535 (LGL86_09555) | 2067615..2068169 | - | 555 | WP_004717774.1 | YniB family protein | - |
| LGL86_RS09540 (LGL86_09560) | 2068472..2069137 | + | 666 | WP_004717775.1 | hexitol phosphatase HxpB | - |
| LGL86_RS09545 (LGL86_09565) | 2069616..2070164 | + | 549 | WP_004717777.1 | metal-dependent hydrolase | - |
| LGL86_RS09550 (LGL86_09570) | 2070364..2071755 | + | 1392 | WP_038242718.1 | L-cystine transporter | - |
| LGL86_RS09555 (LGL86_09575) | 2072020..2072850 | - | 831 | WP_038242778.1 | N-acetylmuramoyl-L-alanine amidase | - |
| LGL86_RS09560 (LGL86_09580) | 2073144..2073935 | - | 792 | WP_038276006.1 | DNA-binding transcriptional regulator KdgR | - |
| LGL86_RS09565 (LGL86_09585) | 2074229..2075614 | + | 1386 | WP_038242721.1 | MFS transporter | - |
| LGL86_RS09570 (LGL86_09590) | 2075677..2075820 | - | 144 | Protein_1859 | transposase | - |
| LGL86_RS09575 (LGL86_09595) | 2075896..2076780 | - | 885 | WP_004723356.1 | protease HtpX | - |
| LGL86_RS09580 (LGL86_09600) | 2077091..2079130 | - | 2040 | WP_004723357.1 | carboxy terminal-processing peptidase | - |
| LGL86_RS09585 (LGL86_09605) | 2079150..2079863 | - | 714 | WP_004723358.1 | RNA chaperone ProQ | - |
| LGL86_RS09590 (LGL86_09610) | 2079959..2080456 | - | 498 | WP_038276008.1 | GAF domain-containing protein | - |
| LGL86_RS09595 (LGL86_09615) | 2080796..2082043 | + | 1248 | WP_071704468.1 | membrane integrity lipid transport subunit YebS | - |
| LGL86_RS09600 (LGL86_09620) | 2082012..2084642 | + | 2631 | WP_038276011.1 | hypothetical protein | VF |
| LGL86_RS09605 (LGL86_09625) | 2085557..2087266 | + | 1710 | WP_004721693.1 | diguanylate cyclase | - |
| LGL86_RS09610 (LGL86_09630) | 2087377..2087619 | + | 243 | WP_004721695.1 | DUF1480 family protein | - |
| LGL86_RS09615 (LGL86_09635) | 2087739..2088137 | - | 399 | WP_004721697.1 | ASCH domain-containing protein | - |
| LGL86_RS09620 (LGL86_09640) | 2088281..2088400 | + | 120 | WP_230675747.1 | small membrane protein YniD | - |
| LGL86_RS09625 (LGL86_09645) | 2088397..2088567 | - | 171 | WP_004721699.1 | YnfU family zinc-binding protein | - |
| LGL86_RS09630 (LGL86_09650) | 2088807..2089040 | - | 234 | WP_004721700.1 | hypothetical protein | - |
| LGL86_RS09635 (LGL86_09655) | 2089567..2090226 | - | 660 | WP_038242727.1 | DUF799 domain-containing protein | - |
| LGL86_RS09640 (LGL86_09660) | 2090223..2090579 | - | 357 | WP_038242728.1 | DUF4810 domain-containing protein | - |
| LGL86_RS09645 (LGL86_09665) | 2090598..2091269 | - | 672 | WP_038251427.1 | CsgG/HfaB family protein | - |
| LGL86_RS09650 (LGL86_09670) | 2092082..2092261 | + | 180 | WP_038242732.1 | GhoT/OrtT family toxin | - |
| LGL86_RS09655 (LGL86_09675) | 2092801..2093184 | - | 384 | WP_038251760.1 | hypothetical protein | - |
| LGL86_RS09660 (LGL86_09680) | 2094392..2095021 | + | 630 | WP_004721714.1 | hypothetical protein | - |
| LGL86_RS09665 (LGL86_09685) | 2095246..2095914 | + | 669 | WP_099511589.1 | hypothetical protein | - |
| LGL86_RS09670 (LGL86_09690) | 2096655..2097800 | + | 1146 | WP_004721718.1 | YRC family class C beta-lactamase | - |
| LGL86_RS09675 (LGL86_09695) | 2097919..2098524 | + | 606 | WP_096823430.1 | hypothetical protein ; Integrase | Integrase |
| - | 2098586..2098732 | + | 147 | - | - | Antitoxin Detail |
| - | 2098590..2098683 | - | 94 | - | - | Toxin Detail |
| LGL86_RS09680 (LGL86_09700) | 2098842..2099183 | - | 342 | WP_004721721.1 | YebY family protein | - |
| LGL86_RS09685 (LGL86_09705) | 2099278..2100162 | - | 885 | WP_004721723.1 | copper homeostasis membrane protein CopD | - |
| LGL86_RS09690 (LGL86_09710) | 2100164..2100550 | - | 387 | WP_038243346.1 | CopC domain-containing protein YobA | - |
| LGL86_RS09695 (LGL86_09715) | 2100955..2101470 | - | 516 | WP_004721727.1 | non-heme ferritin | - |
| LGL86_RS09700 (LGL86_09720) | 2101873..2102103 | + | 231 | WP_038243344.1 | DNA polymerase III subunit theta | - |
| LGL86_RS09705 (LGL86_09725) | 2102226..2103176 | - | 951 | WP_234049419.1 | prolyl aminopeptidase | - |
| LGL86_RS09710 (LGL86_09730) | 2104043..2104705 | + | 663 | WP_038276020.1 | exodeoxyribonuclease X | - |
| LGL86_RS09715 (LGL86_09735) | 2104711..2106741 | - | 2031 | WP_038276022.1 | prolyl oligopeptidase family serine peptidase | - |
| LGL86_RS09720 (LGL86_09740) | 2107050..2107415 | - | 366 | WP_004721741.1 | protein YebF | - |
| LGL86_RS09725 (LGL86_09745) | 2107499..2107807 | - | 309 | WP_004721742.1 | N(4)-acetylcytidine aminohydrolase | - |
| LGL86_RS09730 (LGL86_09750) | 2107848..2108171 | - | 324 | WP_004721744.1 | YebG family protein | - |
| LGL86_RS09735 (LGL86_09755) | 2108308..2109690 | - | 1383 | WP_038243339.1 | ATP-dependent RNA helicase DbpA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|