MGE detailed information
MGE type: Genomic_island MGE length: 140624 bp
Accession: NZ_CP084592 Location: 274624..415247 Organism: Mycobacterium intracellulare subsp. chimaera strain 850 Replicon: chromosome
Accession: NZ_CP084592 Location: 274624..415247 Organism: Mycobacterium intracellulare subsp. chimaera strain 850 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFT51_RS01320 (LFT51_01320) | 269956..270540 | + | 585 | WP_080691126.1 | TIGR03086 family metal-binding protein | - |
| LFT51_RS01325 (LFT51_01325) | 270679..271140 | - | 462 | WP_008263093.1 | DUF4334 domain-containing protein | - |
| LFT51_RS01330 (LFT51_01330) | 271150..272217 | - | 1068 | WP_036454376.1 | histidinol-phosphate transaminase | - |
| LFT51_RS01345 (LFT51_01345) | 272535..273740 | - | 1206 | WP_042910414.1 | site-specific integrase | - |
| LFT51_RS01350 (LFT51_01350) | 273778..273978 | - | 201 | WP_042910415.1 | helix-turn-helix domain-containing protein | - |
| LFT51_RS01355 (LFT51_01355) | 274891..275262 | + | 372 | WP_142383088.1 | hypothetical protein | - |
| LFT51_RS01360 (LFT51_01360) | 275689..275835 | - | 147 | WP_154074405.1 | hypothetical protein | - |
| LFT51_RS01365 (LFT51_01365) | 276820..277587 | + | 768 | WP_142383282.1 | chemotaxis protein | - |
| LFT51_RS01370 (LFT51_01370) | 277584..278306 | + | 723 | WP_142383090.1 | hypothetical protein | - |
| LFT51_RS29430 | 278303..284140 | - | 5838 | WP_051445816.1 | MobF family relaxase | - |
| LFT51_RS01385 (LFT51_01385) | 284418..284903 | + | 486 | WP_051445817.1 | hypothetical protein | - |
| LFT51_RS01390 (LFT51_01390) | 285175..285411 | + | 237 | WP_142383091.1 | hypothetical protein | - |
| LFT51_RS01395 (LFT51_01395) | 286071..286265 | - | 195 | WP_225342058.1 | hypothetical protein | - |
| LFT51_RS01400 (LFT51_01400) | 286357..287361 | - | 1005 | WP_042910419.1 | hypothetical protein ; Integrase | Integrase |
| LFT51_RS01405 (LFT51_01405) | 287538..288098 | - | 561 | WP_042910420.1 | RES domain-containing protein | Toxin Detail |
| LFT51_RS01410 (LFT51_01410) | 288095..288436 | - | 342 | WP_042910421.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| LFT51_RS01415 (LFT51_01415) | 288484..289434 | + | 951 | WP_226069250.1 | hypothetical protein | - |
| LFT51_RS01420 (LFT51_01420) | 289431..289676 | + | 246 | WP_226069251.1 | hypothetical protein | - |
| LFT51_RS01425 (LFT51_01425) | 289854..290848 | - | 995 | Protein_277 | IS481 family transposase ISMysp5 | Transposase |
| LFT51_RS01430 (LFT51_01430) | 291417..291694 | - | 278 | Protein_278 | site-specific integrase | - |
| LFT51_RS01435 (LFT51_01435) | 291884..292516 | - | 633 | WP_042910422.1 | CAP domain-containing protein | - |
| LFT51_RS01440 (LFT51_01440) | 292878..293537 | - | 660 | WP_042910423.1 | hypothetical protein | - |
| LFT51_RS01445 (LFT51_01445) | 293534..294211 | - | 678 | WP_051445819.1 | hypothetical protein | - |
| LFT51_RS01450 (LFT51_01450) | 294215..295669 | - | 1455 | WP_054585687.1 | MlaD family protein | - |
| LFT51_RS01455 (LFT51_01455) | 295671..296771 | - | 1101 | WP_226069276.1 | MCE family protein | - |
| LFT51_RS01460 (LFT51_01460) | 296807..298138 | - | 1332 | WP_042910425.1 | MCE family protein | - |
| LFT51_RS01465 (LFT51_01465) | 298135..299394 | - | 1260 | WP_051445822.1 | MCE family protein | - |
| LFT51_RS01470 (LFT51_01470) | 299391..300419 | - | 1029 | WP_042910426.1 | MCE family protein | - |
| LFT51_RS01475 (LFT51_01475) | 300477..301820 | - | 1344 | WP_054585688.1 | MCE family protein | - |
| LFT51_RS01480 (LFT51_01480) | 301825..302682 | - | 858 | WP_054585689.1 | ABC transporter permease | - |
| LFT51_RS01485 (LFT51_01485) | 302679..303464 | - | 786 | WP_051445820.1 | ABC transporter permease | - |
| LFT51_RS01490 (LFT51_01490) | 303872..304205 | + | 334 | Protein_290 | transposase | - |
| LFT51_RS01495 (LFT51_01495) | 304279..304482 | + | 204 | Protein_291 | integrase core domain-containing protein | - |
| LFT51_RS01500 (LFT51_01500) | 305049..305771 | - | 723 | WP_101930933.1 | IS21 family transposase ISAau2 | Transposase |
| LFT51_RS01505 (LFT51_01505) | 305833..307075 | - | 1243 | Protein_293 | IS21 family transposase ISMyma9 | Transposase |
| LFT51_RS01510 (LFT51_01510) | 307763..308335 | - | 573 | WP_042910430.1 | protocatechuate 3,4-dioxygenase subunit alpha | - |
| LFT51_RS01515 (LFT51_01515) | 308363..309045 | - | 683 | Protein_295 | protocatechuate 3,4-dioxygenase subunit beta | - |
| LFT51_RS01520 (LFT51_01520) | 309168..309947 | + | 780 | WP_042910456.1 | IclR family transcriptional regulator | - |
| LFT51_RS01525 (LFT51_01525) | 310546..311457 | + | 912 | WP_042910432.1 | class I SAM-dependent methyltransferase | - |
| LFT51_RS01530 (LFT51_01530) | 311721..312641 | + | 921 | WP_042910433.1 | class I SAM-dependent methyltransferase | - |
| LFT51_RS01535 (LFT51_01535) | 312702..313835 | + | 1134 | WP_042910434.1 | epoxide hydrolase | - |
| LFT51_RS01540 (LFT51_01540) | 313867..314053 | - | 187 | Protein_300 | transposase | - |
| LFT51_RS01545 (LFT51_01545) | 314500..315843 | + | 1344 | WP_051445821.1 | SRPBCC family protein | - |
| LFT51_RS01550 (LFT51_01550) | 315840..316382 | + | 543 | WP_042910435.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LFT51_RS01555 (LFT51_01555) | 316488..317519 | + | 1032 | WP_042910437.1 | 2,3-butanediol dehydrogenase | - |
| LFT51_RS01560 (LFT51_01560) | 317574..318827 | + | 1254 | WP_087139621.1 | CoA transferase | - |
| LFT51_RS01565 (LFT51_01565) | 318824..319990 | + | 1167 | WP_042910439.1 | transporter | - |
| LFT51_RS01570 (LFT51_01570) | 320027..320470 | + | 444 | WP_042910440.1 | OB-fold domain-containing protein | - |
| LFT51_RS01575 (LFT51_01575) | 320463..321518 | + | 1056 | WP_042910459.1 | MaoC family dehydratase N-terminal domain-containing protein | - |
| LFT51_RS01580 (LFT51_01580) | 321730..323139 | + | 1410 | WP_042910177.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LFT51_RS01585 (LFT51_01585) | 323160..323696 | + | 537 | WP_042910179.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| LFT51_RS01590 (LFT51_01590) | 323792..324232 | + | 441 | WP_042910181.1 | cupin domain-containing protein | - |
| LFT51_RS01595 (LFT51_01595) | 324338..325210 | + | 873 | WP_226069252.1 | NAD(P)-dependent oxidoreductase | - |
| LFT51_RS01600 (LFT51_01600) | 325394..325906 | + | 513 | WP_226069253.1 | MarR family transcriptional regulator | - |
| LFT51_RS01605 (LFT51_01605) | 326042..326785 | + | 744 | WP_042910184.1 | class II aldolase/adducin family protein | - |
| LFT51_RS01610 (LFT51_01610) | 327151..327339 | - | 189 | WP_080691109.1 | IS110 family transposase ISAar18 | Transposase |
| LFT51_RS01615 (LFT51_01615) | 327930..328932 | + | 1003 | Protein_315 | IS481 family transposase ISMysp5 | Transposase |
| LFT51_RS01620 (LFT51_01620) | 329239..330321 | - | 1083 | WP_197690737.1 | IS110 family transposase ISSso6 | Transposase |
| LFT51_RS01625 (LFT51_01625) | 330417..330620 | - | 204 | WP_080691110.1 | helix-turn-helix domain-containing protein | - |
| LFT51_RS01630 (LFT51_01630) | 330816..331637 | + | 822 | WP_226069254.1 | 2-keto-4-pentenoate hydratase | - |
| LFT51_RS01635 (LFT51_01635) | 331675..331937 | + | 263 | Protein_319 | acetaldehyde dehydrogenase (acetylating) | - |
| LFT51_RS01640 (LFT51_01640) | 331966..332203 | + | 238 | Protein_320 | 4-hydroxy-2-oxovalerate aldolase | - |
| LFT51_RS01645 (LFT51_01645) | 332363..332664 | + | 302 | Protein_321 | helix-turn-helix domain-containing protein | - |
| LFT51_RS01650 (LFT51_01650) | 332781..333680 | + | 900 | WP_042910185.1 | alpha/beta fold hydrolase | - |
| LFT51_RS01655 (LFT51_01655) | 333680..334999 | + | 1320 | WP_054585633.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LFT51_RS01660 (LFT51_01660) | 335014..335517 | + | 504 | WP_226069255.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LFT51_RS01665 (LFT51_01665) | 335554..336786 | + | 1233 | WP_042910187.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LFT51_RS01670 (LFT51_01670) | 336835..337779 | + | 945 | WP_054585634.1 | extradiol ring-cleavage dioxygenase | - |
| LFT51_RS01675 (LFT51_01675) | 338074..338469 | + | 396 | WP_042910189.1 | DUF732 domain-containing protein | - |
| LFT51_RS01680 (LFT51_01680) | 338505..338795 | - | 291 | Protein_328 | IS3 family transposase ISMsm7 | Transposase |
| LFT51_RS01685 (LFT51_01685) | 338803..339003 | - | 201 | Protein_329 | IS30 family transposase | - |
| LFT51_RS01690 (LFT51_01690) | 338999..340063 | - | 1065 | WP_042910040.1 | IS110 family transposase IS1547 | Transposase |
| LFT51_RS01695 (LFT51_01695) | 340314..341489 | - | 1176 | Protein_331 | IS30 family transposase ISPfr9 | Transposase |
| LFT51_RS01700 (LFT51_01700) | 341473..342144 | - | 672 | WP_080691086.1 | IS3 family transposase ISAcl2 | Transposase |
| LFT51_RS01705 (LFT51_01705) | 342141..342449 | - | 309 | WP_042909991.1 | IS3 family transposase ISAcl2 | Transposase |
| LFT51_RS01710 (LFT51_01710) | 342673..343143 | - | 471 | WP_042909992.1 | hypothetical protein | - |
| LFT51_RS01715 (LFT51_01715) | 343569..344780 | - | 1212 | WP_042909993.1 | FAD-dependent oxidoreductase | - |
| LFT51_RS01720 (LFT51_01720) | 344759..344983 | - | 225 | WP_042909995.1 | ferredoxin | - |
| LFT51_RS01725 (LFT51_01725) | 345018..345824 | - | 807 | WP_042909996.1 | 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | - |
| LFT51_RS01730 (LFT51_01730) | 345821..346129 | - | 309 | WP_051445767.1 | hypothetical protein | - |
| LFT51_RS01735 (LFT51_01735) | 346126..346731 | - | 606 | WP_051445775.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| LFT51_RS01740 (LFT51_01740) | 346739..348181 | - | 1443 | WP_054585859.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LFT51_RS01745 (LFT51_01745) | 348587..348790 | - | 204 | WP_042909997.1 | hypothetical protein | - |
| LFT51_RS01750 (LFT51_01750) | 349168..350250 | + | 1083 | WP_197690737.1 | IS110 family transposase ISSso6 | Transposase |
| LFT51_RS01755 (LFT51_01755) | 350685..351677 | + | 993 | Protein_343 | IS481 family transposase ISMysp5 | Transposase |
| LFT51_RS01760 (LFT51_01760) | 352284..352472 | + | 189 | WP_042909998.1 | hypothetical protein | - |
| LFT51_RS01765 (LFT51_01765) | 352472..353476 | + | 1005 | WP_042910000.1 | 2-dehydropantoate 2-reductase | - |
| LFT51_RS01770 (LFT51_01770) | 354172..355572 | + | 1401 | WP_042910002.1 | SRPBCC family protein | - |
| LFT51_RS01775 (LFT51_01775) | 355637..356155 | + | 519 | WP_042910003.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LFT51_RS01780 (LFT51_01780) | 356201..356416 | + | 216 | WP_226069256.1 | dihydrodiol dehydrogenase | - |
| LFT51_RS01785 (LFT51_01785) | 356605..356917 | + | 313 | Protein_349 | IS110 family transposase | - |
| LFT51_RS01790 (LFT51_01790) | 357385..358416 | + | 1032 | WP_051445769.1 | hypothetical protein | VF |
| LFT51_RS01795 (LFT51_01795) | 358715..359859 | - | 1145 | Protein_351 | IS3 family transposase ISMyma1 | Transposase |
| LFT51_RS01800 (LFT51_01800) | 360166..361428 | - | 1263 | WP_051445770.1 | lyase family protein | - |
| LFT51_RS01805 (LFT51_01805) | 361425..361991 | - | 567 | WP_080691088.1 | protocatechuate 3,4-dioxygenase subunit alpha | - |
| LFT51_RS01810 (LFT51_01810) | 361984..362772 | - | 789 | WP_051445771.1 | protocatechuate 3,4-dioxygenase subunit beta | - |
| LFT51_RS01815 (LFT51_01815) | 363399..364772 | + | 1374 | WP_054586282.1 | Rieske 2Fe-2S domain-containing protein | - |
| LFT51_RS01820 (LFT51_01820) | 364918..365727 | + | 810 | WP_051445773.1 | IclR family transcriptional regulator | - |
| LFT51_RS01825 (LFT51_01825) | 366128..367213 | + | 1086 | WP_042910007.1 | cupin domain-containing protein | - |
| LFT51_RS01830 (LFT51_01830) | 367242..368249 | + | 1008 | WP_042910008.1 | dihydrodipicolinate synthase family protein | - |
| LFT51_RS01835 (LFT51_01835) | 368309..369127 | + | 819 | WP_042910010.1 | 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | - |
| LFT51_RS01840 (LFT51_01840) | 369148..370038 | + | 891 | WP_042910012.1 | VOC family protein | - |
| LFT51_RS01845 (LFT51_01845) | 370076..370468 | + | 393 | WP_042910013.1 | SCP2 sterol-binding domain-containing protein | - |
| LFT51_RS01850 (LFT51_01850) | 370609..371688 | + | 1080 | WP_042910015.1 | dihydrodipicolinate synthase family protein | - |
| LFT51_RS01855 (LFT51_01855) | 371856..371957 | + | 102 | Protein_363 | ATP-binding protein | - |
| LFT51_RS01860 (LFT51_01860) | 372177..372320 | + | 144 | WP_226069258.1 | hypothetical protein | - |
| LFT51_RS01865 (LFT51_01865) | 372945..374187 | + | 1243 | Protein_365 | IS21 family transposase ISMyma9 | Transposase |
| LFT51_RS01870 (LFT51_01870) | 374249..374971 | + | 723 | WP_101930933.1 | IS21 family transposase ISAau2 | Transposase |
| LFT51_RS01875 (LFT51_01875) | 375646..375966 | + | 321 | WP_080691089.1 | 4Fe-4S binding protein | - |
| LFT51_RS01880 (LFT51_01880) | 376010..377470 | + | 1461 | WP_042910019.1 | aldehyde dehydrogenase family protein | - |
| LFT51_RS01885 (LFT51_01885) | 377614..379089 | + | 1476 | WP_042910020.1 | aldehyde dehydrogenase family protein | - |
| LFT51_RS01890 (LFT51_01890) | 379505..380017 | + | 513 | WP_042910021.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LFT51_RS01895 (LFT51_01895) | 380102..381466 | + | 1365 | WP_042910023.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LFT51_RS01900 (LFT51_01900) | 381522..382313 | + | 792 | WP_042910024.1 | hypothetical protein | VF |
| LFT51_RS01905 (LFT51_01905) | 382369..383394 | + | 1026 | WP_042910026.1 | hypothetical protein | VF |
| LFT51_RS01910 (LFT51_01910) | 383468..385255 | + | 1788 | WP_226069259.1 | FAD-binding protein | - |
| LFT51_RS01915 (LFT51_01915) | 385252..385530 | + | 279 | WP_080691090.1 | 4Fe-4S binding protein | - |
| LFT51_RS01920 (LFT51_01920) | 385635..386624 | + | 990 | WP_226069260.1 | hypothetical protein | - |
| LFT51_RS01925 (LFT51_01925) | 386621..387802 | + | 1182 | WP_042910028.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LFT51_RS01930 (LFT51_01930) | 387844..388293 | + | 450 | WP_226069261.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LFT51_RS01935 (LFT51_01935) | 388323..388721 | + | 399 | WP_042910030.1 | SCP2 sterol-binding domain-containing protein | - |
| LFT51_RS29435 | 389295..389417 | + | 123 | WP_257790317.1 | hypothetical protein | - |
| LFT51_RS01940 (LFT51_01940) | 389543..390488 | + | 946 | Protein_381 | IS3 family transposase IS999 | Transposase |
| LFT51_RS01945 (LFT51_01945) | 390571..391746 | + | 1176 | Protein_382 | IS30 family transposase ISPfr9 | Transposase |
| LFT51_RS01950 (LFT51_01950) | 391997..393061 | + | 1065 | WP_042910040.1 | IS110 family transposase IS1547 | Transposase |
| LFT51_RS01955 (LFT51_01955) | 393057..393257 | + | 201 | Protein_384 | IS30 family transposase | - |
| LFT51_RS01960 (LFT51_01960) | 393265..393582 | + | 318 | Protein_385 | IS3 family transposase IS999 | Transposase |
| LFT51_RS01965 (LFT51_01965) | 393622..394682 | - | 1061 | Protein_386 | IS110 family transposase ISAar29 | Transposase |
| LFT51_RS29440 | 395099..395341 | + | 243 | WP_157679848.1 | IS3 family transposase | - |
| LFT51_RS01975 (LFT51_01975) | 395834..396508 | - | 675 | WP_042909987.1 | 3-oxoacid CoA-transferase subunit B | - |
| LFT51_RS01980 (LFT51_01980) | 396505..397188 | - | 684 | WP_042909985.1 | 3-oxoacid CoA-transferase subunit A | - |
| LFT51_RS01985 (LFT51_01985) | 397217..397606 | - | 390 | WP_080691091.1 | 4-carboxymuconolactone decarboxylase | - |
| LFT51_RS01990 (LFT51_01990) | 397603..398388 | - | 786 | WP_142383145.1 | alpha/beta hydrolase | - |
| LFT51_RS01995 (LFT51_01995) | 398678..399121 | - | 444 | WP_080691083.1 | cupin domain-containing protein | - |
| LFT51_RS02000 (LFT51_02000) | 399283..399387 | - | 105 | Protein_393 | 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | - |
| LFT51_RS02005 (LFT51_02005) | 399384..399692 | - | 309 | WP_051445767.1 | hypothetical protein | - |
| LFT51_RS02010 (LFT51_02010) | 399689..400294 | - | 606 | WP_051445775.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| LFT51_RS02015 (LFT51_02015) | 400302..401744 | - | 1443 | WP_054585859.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LFT51_RS02020 (LFT51_02020) | 402314..402788 | - | 475 | Protein_397 | transposase | - |
| LFT51_RS02025 (LFT51_02025) | 403105..403332 | - | 228 | WP_145955071.1 | hypothetical protein | - |
| LFT51_RS02030 (LFT51_02030) | 403495..404091 | + | 597 | WP_087139624.1 | TetR/AcrR family transcriptional regulator | - |
| LFT51_RS02035 (LFT51_02035) | 404397..404579 | + | 183 | WP_051445765.1 | IS110 family transposase ISArsp3 | Transposase |
| LFT51_RS02040 (LFT51_02040) | 404600..404959 | + | 360 | WP_051445764.1 | hypothetical protein | - |
| LFT51_RS02045 (LFT51_02045) | 405129..405863 | - | 735 | WP_051445763.1 | TetR/AcrR family transcriptional regulator | - |
| LFT51_RS02050 (LFT51_02050) | 406506..407810 | + | 1305 | WP_042910032.1 | MCE family protein | - |
| LFT51_RS02055 (LFT51_02055) | 407827..408018 | + | 192 | WP_042909982.1 | hypothetical protein | - |
| LFT51_RS02060 (LFT51_02060) | 408193..408828 | + | 636 | WP_042909981.1 | hypothetical protein | VF |
| LFT51_RS02065 (LFT51_02065) | 409031..409174 | + | 144 | WP_180831747.1 | hypothetical protein | - |
| LFT51_RS02070 (LFT51_02070) | 409370..409666 | - | 297 | WP_042909980.1 | hypothetical protein | - |
| LFT51_RS02075 (LFT51_02075) | 409666..410652 | - | 987 | WP_087139627.1 | caspase family protein | - |
| LFT51_RS02080 (LFT51_02080) | 410659..411030 | - | 372 | WP_087139805.1 | TIR domain-containing protein | - |
| LFT51_RS02085 (LFT51_02085) | 412316..413221 | - | 906 | WP_142383143.1 | hypothetical protein | - |
| LFT51_RS02090 (LFT51_02090) | 413311..414458 | + | 1148 | WP_087139632.1 | IS3 family transposase ISMyma1 | Transposase |
| LFT51_RS02095 (LFT51_02095) | 414483..415247 | - | 765 | WP_087139634.1 | hypothetical protein | - |
| LFT51_RS02105 (LFT51_02105) | 418844..419002 | - | 159 | WP_180831743.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|