MGE detailed information
MGE type: Prophage MGE length: 66687 bp
Accession: NZ_CP084592 Location: 1067248..1133934 Organism: Mycobacterium intracellulare subsp. chimaera strain 850 Replicon: chromosome
Accession: NZ_CP084592 Location: 1067248..1133934 Organism: Mycobacterium intracellulare subsp. chimaera strain 850 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFT51_RS05295 (LFT51_05295) | 1062686..1064302 | + | 1617 | WP_085981616.1 | long-chain fatty acid--CoA ligase | - |
| LFT51_RS05300 (LFT51_05300) | 1064351..1065493 | + | 1143 | WP_042909895.1 | acyl-CoA dehydrogenase family protein | - |
| LFT51_RS05305 (LFT51_05305) | 1065788..1066861 | - | 1074 | WP_008256196.1 | IS110 family transposase | - |
| LFT51_RS05310 (LFT51_05310) | 1067564..1067797 | - | 234 | Protein_1047 | ISL3 family transposase ISPfr18 | Transposase |
| LFT51_RS05315 (LFT51_05315) | 1067866..1068978 | - | 1113 | Protein_1048 | ISL3 family transposase ISPfr18 | Transposase |
| LFT51_RS05320 (LFT51_05320) | 1069150..1069794 | - | 645 | WP_019731991.1 | ISNCY family transposase ISBj12 | Transposase |
| LFT51_RS05330 (LFT51_05330) | 1069933..1070636 | - | 704 | Protein_1050 | phosphoglycerate mutase family protein | - |
| LFT51_RS05335 (LFT51_05335) | 1070719..1071591 | + | 873 | WP_007168405.1 | MaoC/PaaZ C-terminal domain-containing protein | - |
| LFT51_RS05340 (LFT51_05340) | 1071744..1072019 | + | 276 | WP_007168406.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LFT51_RS05345 (LFT51_05345) | 1072019..1072411 | + | 393 | WP_007168407.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LFT51_RS05350 (LFT51_05350) | 1072559..1073718 | - | 1160 | Protein_1054 | trehalose-phosphatase | - |
| LFT51_RS05355 (LFT51_05355) | 1073760..1075098 | - | 1339 | Protein_1055 | WS/DGAT domain-containing protein | - |
| LFT51_RS05360 (LFT51_05360) | 1075258..1075482 | - | 225 | Protein_1056 | IS1595 family transposase ISMva1 | Transposase |
| LFT51_RS05365 (LFT51_05365) | 1075743..1077152 | + | 1410 | Protein_1057 | IS1182 family transposase ISStsp11 | Transposase |
| LFT51_RS05370 (LFT51_05370) | 1077477..1078430 | - | 954 | WP_007168413.1 | hypothetical protein | VF |
| LFT51_RS05375 (LFT51_05375) | 1078427..1080004 | - | 1578 | WP_007168414.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LFT51_RS05380 (LFT51_05380) | 1080026..1080914 | - | 889 | Protein_1060 | metal-dependent hydrolase | - |
| LFT51_RS05385 (LFT51_05385) | 1080963..1081865 | - | 903 | WP_170826078.1 | metal-dependent hydrolase | - |
| LFT51_RS05390 (LFT51_05390) | 1082311..1082910 | - | 600 | Protein_1062 | TetR/AcrR family transcriptional regulator | - |
| LFT51_RS05395 (LFT51_05395) | 1083008..1083856 | + | 849 | WP_042909893.1 | CoA transferase | - |
| LFT51_RS05400 (LFT51_05400) | 1083853..1085028 | + | 1176 | WP_019732177.1 | thiolase family protein | - |
| LFT51_RS05405 (LFT51_05405) | 1085038..1086714 | + | 1677 | WP_007168424.1 | long-chain-fatty-acid--CoA ligase | - |
| LFT51_RS05410 (LFT51_05410) | 1086711..1087487 | + | 777 | WP_007168425.1 | enoyl-CoA hydratase-related protein | - |
| LFT51_RS05415 (LFT51_05415) | 1087495..1088643 | + | 1149 | WP_007168426.1 | acyl-CoA dehydrogenase family protein | - |
| LFT51_RS05420 (LFT51_05420) | 1088669..1089427 | + | 759 | WP_007168427.1 | hypothetical protein | VF |
| LFT51_RS05425 (LFT51_05425) | 1089850..1090620 | + | 771 | WP_007168428.1 | hypothetical protein | - |
| LFT51_RS05430 (LFT51_05430) | 1090568..1091767 | + | 1200 | WP_225325907.1 | IS30 family transposase ISMsm8 | Transposase |
| LFT51_RS05435 (LFT51_05435) | 1091775..1092365 | + | 591 | Protein_1071 | hypothetical protein ; Integrase | Integrase |
| LFT51_RS05440 (LFT51_05440) | 1092395..1092721 | + | 327 | WP_007168431.1 | helix-turn-helix transcriptional regulator | - |
| LFT51_RS05445 (LFT51_05445) | 1092862..1093989 | + | 1128 | WP_224112882.1 | hypothetical protein ; Integrase | Integrase |
| LFT51_RS29465 | 1094068..1094415 | + | 348 | WP_050485487.1 | IS256 family transposase IS2606 | Transposase |
| LFT51_RS29470 | 1094420..1095374 | + | 955 | Protein_1075 | IS256 family transposase ISArsp4 | Transposase |
| LFT51_RS05455 (LFT51_05455) | 1095304..1096539 | - | 1236 | WP_042909891.1 | IS256 family transposase IS1512 | Transposase |
| LFT51_RS05460 (LFT51_05460) | 1096695..1097273 | + | 579 | Protein_1077 | hypothetical protein ; Integrase | Integrase |
| LFT51_RS05465 (LFT51_05465) | 1097391..1097981 | - | 591 | WP_101930903.1 | hypothetical protein | - |
| LFT51_RS29475 | 1097978..1100467 | - | 2490 | WP_007168436.1 | hypothetical protein ; Integrase | Integrase |
| LFT51_RS05480 (LFT51_05480) | 1100464..1101630 | - | 1167 | WP_007168437.1 | hypothetical protein ; Integrase | Integrase |
| LFT51_RS05485 (LFT51_05485) | 1101763..1102266 | + | 504 | Protein_1081 | hypothetical protein ; Integrase | Integrase |
| LFT51_RS05490 (LFT51_05490) | 1102579..1104495 | + | 1917 | WP_225336867.1 | hypothetical protein ; Integrase | Integrase |
| LFT51_RS05495 (LFT51_05495) | 1104485..1104916 | + | 432 | WP_007168443.1 | DUF6262 family protein | - |
| LFT51_RS05500 (LFT51_05500) | 1105015..1105227 | + | 213 | Protein_1084 | transposase | - |
| LFT51_RS05505 (LFT51_05505) | 1105263..1105682 | - | 420 | Protein_1085 | IS256 family transposase ISArsp4 | Transposase |
| LFT51_RS05510 (LFT51_05510) | 1105805..1105972 | - | 168 | Protein_1086 | ISNCY family transposase ISKol11 | Transposase |
| LFT51_RS05515 (LFT51_05515) | 1106085..1106912 | - | 828 | WP_224112851.1 | ISNCY family transposase ISKol11 | Transposase |
| LFT51_RS05520 (LFT51_05520) | 1106956..1107222 | - | 267 | Protein_1088 | ISNCY family transposase ISLbi1 | Transposase |
| LFT51_RS05525 (LFT51_05525) | 1107557..1109185 | + | 1629 | WP_007168449.1 | long-chain fatty acid--CoA ligase | - |
| LFT51_RS05530 (LFT51_05530) | 1109238..1110179 | + | 942 | WP_007168450.1 | R2-like ligand-binding oxidase | - |
| LFT51_RS05535 (LFT51_05535) | 1110386..1110811 | + | 426 | WP_007168451.1 | OB-fold domain-containing protein | - |
| LFT51_RS05540 (LFT51_05540) | 1110811..1111953 | + | 1143 | WP_040622299.1 | thiolase family protein | - |
| LFT51_RS05545 (LFT51_05545) | 1112020..1112913 | + | 894 | WP_007168453.1 | hypothetical protein | VF |
| LFT51_RS05550 (LFT51_05550) | 1112944..1114563 | + | 1620 | WP_007168454.1 | class I adenylate-forming enzyme family protein | - |
| LFT51_RS05555 (LFT51_05555) | 1114811..1115932 | + | 1122 | WP_050790029.1 | acyl-CoA dehydrogenase family protein | - |
| LFT51_RS05560 (LFT51_05560) | 1116056..1117141 | + | 1086 | WP_224112852.1 | transposase | - |
| LFT51_RS05565 (LFT51_05565) | 1117607..1118824 | + | 1218 | WP_007168458.1 | acyl-CoA dehydrogenase family protein | - |
| LFT51_RS05570 (LFT51_05570) | 1119351..1119959 | - | 609 | WP_224112853.1 | hypothetical protein | VF |
| LFT51_RS05575 (LFT51_05575) | 1119956..1121362 | - | 1407 | WP_007168461.1 | IS481 family transposase ISGur11 | Transposase |
| LFT51_RS05580 (LFT51_05580) | 1121409..1121567 | - | 159 | Protein_1100 | hypothetical protein | - |
| LFT51_RS05585 (LFT51_05585) | 1121554..1122441 | - | 888 | Protein_1101 | DNA-binding protein | - |
| LFT51_RS05590 (LFT51_05590) | 1122537..1123622 | - | 1086 | Protein_1102 | succinyldiaminopimelate transaminase | - |
| LFT51_RS05595 (LFT51_05595) | 1123685..1124011 | - | 327 | WP_007168467.1 | ferredoxin family protein | - |
| LFT51_RS05600 (LFT51_05600) | 1124360..1124638 | + | 279 | WP_007168468.1 | IS3 family transposase ISMyma8 | Transposase |
| LFT51_RS05605 (LFT51_05605) | 1124635..1124790 | + | 156 | WP_154074411.1 | hypothetical protein | - |
| LFT51_RS05610 (LFT51_05610) | 1124866..1125315 | + | 450 | WP_007168470.1 | IS3 family transposase ISMyma8 | Transposase |
| LFT51_RS05615 (LFT51_05615) | 1125719..1125952 | + | 234 | Protein_1107 | hypothetical protein | - |
| LFT51_RS05620 (LFT51_05620) | 1126177..1126576 | + | 400 | Protein_1108 | alpha/beta hydrolase | - |
| LFT51_RS05625 (LFT51_05625) | 1126624..1127658 | + | 1035 | WP_219859229.1 | dihydrodipicolinate reductase | - |
| LFT51_RS05630 (LFT51_05630) | 1127975..1128619 | + | 645 | WP_230493326.1 | cation:proton antiporter | - |
| LFT51_RS05635 (LFT51_05635) | 1128641..1129150 | + | 510 | Protein_1111 | IS256 family transposase ISArsp4 | Transposase |
| LFT51_RS05640 (LFT51_05640) | 1129183..1129998 | - | 816 | WP_007168475.1 | IS30 family transposase ISBlo4 | Transposase |
| LFT51_RS05645 (LFT51_05645) | 1130084..1130365 | - | 282 | WP_136244823.1 | hypothetical protein | - |
| LFT51_RS29480 | 1130495..1131301 | - | 807 | WP_230484171.1 | IS256 family transposase ISPaes3 | Transposase |
| LFT51_RS29485 | 1131282..1131842 | - | 561 | WP_080691073.1 | IS256 family transposase ISRo1 | Transposase |
| LFT51_RS05655 (LFT51_05655) | 1131922..1132321 | + | 400 | Protein_1116 | replicative DNA helicase | - |
| LFT51_RS05660 (LFT51_05660) | 1132345..1132593 | + | 249 | Protein_1117 | transposase | - |
| LFT51_RS05665 (LFT51_05665) | 1132750..1133934 | + | 1185 | WP_040624521.1 | IS30 family transposase | - |
| LFT51_RS05670 (LFT51_05670) | 1134036..1134188 | - | 153 | WP_007168480.1 | enoyl-CoA hydratase-related protein | - |
| LFT51_RS05675 (LFT51_05675) | 1134264..1134356 | - | 93 | Protein_1120 | ATPase | - |
| LFT51_RS05680 (LFT51_05680) | 1134379..1134522 | + | 144 | WP_155250266.1 | hypothetical protein | - |
| LFT51_RS05685 (LFT51_05685) | 1135970..1136275 | - | 306 | WP_007168485.1 | hypothetical protein | - |
| LFT51_RS05690 (LFT51_05690) | 1136336..1136677 | - | 342 | WP_007168486.1 | hypothetical protein | - |
| LFT51_RS05695 (LFT51_05695) | 1136698..1137105 | - | 408 | WP_007168487.1 | type II toxin-antitoxin system VapC family toxin | - |
| LFT51_RS05700 (LFT51_05700) | 1137109..1137381 | - | 273 | WP_033711258.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|